RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 J3QQQ9 107 aa10.23□□□□□ -0.77
HMGN1-214ENST00000482733 C3orf79P0CE67 100 aa10.23□□□□□ -0.77
HMGN1-214ENST00000482733 NMUP48645 174 aa10.23□□□□□ -0.77
HMGN1-214ENST00000482733 MEIG1Q5JSS6 88 aa10.23□□□□□ -0.77
HMGN1-214ENST00000482733 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
HMGN1-214ENST00000482733 J3QL48 77 aa10.22□□□□□ -0.77
HMGN1-214ENST00000482733 LGALS3P17931 250 aaKnown RBP10.22□□□□□ -0.77
HMGN1-214ENST00000482733 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
HMGN1-214ENST00000482733 C20orf202A1L168 122 aa10.21□□□□□ -0.77
HMGN1-214ENST00000482733 E9PLD3 99 aa10.21□□□□□ -0.77
HMGN1-214ENST00000482733 TSPEAR-AS2P59090 65 aa10.21□□□□□ -0.77
HMGN1-214ENST00000482733 KRTDAPP60985 99 aa10.21□□□□□ -0.77
HMGN1-214ENST00000482733 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
HMGN1-214ENST00000482733 SRSF9Q13242 221 aaKnown RBP eCLIP10.21□□□□□ -0.77
HMGN1-214ENST00000482733 LCE2DQ5TA82 110 aaPredicted RBP10.21□□□□□ -0.77
HMGN1-214ENST00000482733 SMIM13P0DJ93 91 aa10.2□□□□□ -0.78
HMGN1-214ENST00000482733 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
HMGN1-214ENST00000482733 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
HMGN1-214ENST00000482733 IGLV7-43P04211 117 aa10.19□□□□□ -0.78
HMGN1-214ENST00000482733 S100A6P06703 90 aa10.19□□□□□ -0.78
HMGN1-214ENST00000482733 AKR1D1P51857 326 aa10.19□□□□□ -0.78
HMGN1-214ENST00000482733 S100A2P29034 98 aa10.18□□□□□ -0.78
HMGN1-214ENST00000482733 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
HMGN1-214ENST00000482733 VPREB1P12018 145 aa10.17□□□□□ -0.78
HMGN1-214ENST00000482733 REG3GQ6UW15 175 aa10.17□□□□□ -0.78
HMGN1-214ENST00000482733 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
HMGN1-214ENST00000482733 MIR7-3HGQ8N6C7 128 aa10.17□□□□□ -0.78
HMGN1-214ENST00000482733 DMBT1Q9UGM3 2413 aaPredicted RBP10.16□□□□□ -0.78
HMGN1-214ENST00000482733 HERC1Q15751 4861 aa10.16□□□□□ -0.78
HMGN1-214ENST00000482733 GAGE10A6NGK3 116 aa10.15□□□□□ -0.78
HMGN1-214ENST00000482733 DIRC1Q969H9 104 aa10.14□□□□□ -0.79
HMGN1-214ENST00000482733 RPL37AP8A6NKH3 93 aa10.13□□□□□ -0.79
HMGN1-214ENST00000482733 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
HMGN1-214ENST00000482733 BOD1L2Q8IYS8 172 aa10.12□□□□□ -0.79
HMGN1-214ENST00000482733 A0A0J9YXY3 114 aa10.11□□□□□ -0.79
HMGN1-214ENST00000482733 BCE1O60756 84 aa10.11□□□□□ -0.79
HMGN1-214ENST00000482733 Q8NDZ9 215 aa10.11□□□□□ -0.79
HMGN1-214ENST00000482733 IGLV1-50A0A075B6I6 118 aa10.1□□□□□ -0.79
HMGN1-214ENST00000482733 LOC107984156A0A0G2JMH3 177 aa10.1□□□□□ -0.79
HMGN1-214ENST00000482733 M0R378 163 aa10.1□□□□□ -0.79
HMGN1-214ENST00000482733 ZNF861PO60384 105 aa10.1□□□□□ -0.79
HMGN1-214ENST00000482733 ARL17AQ8IVW1 177 aa10.1□□□□□ -0.79
HMGN1-214ENST00000482733 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
HMGN1-214ENST00000482733 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
HMGN1-214ENST00000482733 IGKV2D-26A0A0A0MRZ7 120 aa10.09□□□□□ -0.79
HMGN1-214ENST00000482733 H0Y9J4 135 aa10.09□□□□□ -0.79
HMGN1-214ENST00000482733 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
HMGN1-214ENST00000482733 SNRPEP62304 92 aaKnown RBP10.09□□□□□ -0.79
HMGN1-214ENST00000482733 MIEN1Q9BRT3 115 aa10.09□□□□□ -0.79
HMGN1-214ENST00000482733 ZNF815PA8K554 130 aa10.08□□□□□ -0.8
HMGN1-214ENST00000482733 RPL28P46779 137 aaKnown RBP10.08□□□□□ -0.8
HMGN1-214ENST00000482733 DAND5Q8N907 189 aa10.08□□□□□ -0.8
HMGN1-214ENST00000482733 TIMM17BO60830 172 aa10.07□□□□□ -0.8
HMGN1-214ENST00000482733 C5orf52A6NGY3 159 aa10.06□□□□□ -0.8
HMGN1-214ENST00000482733 ATOH7Q8N100 152 aa10.06□□□□□ -0.8
HMGN1-214ENST00000482733 MT1HL1P0DM35 61 aa10.05□□□□□ -0.8
HMGN1-214ENST00000482733 ANKRD39Q53RE8 183 aa10.05□□□□□ -0.8
HMGN1-214ENST00000482733 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
HMGN1-214ENST00000482733 TNXBP22105 4242 aa10.04□□□□□ -0.8
HMGN1-214ENST00000482733 TRBV10-2A0A0K0K1G8 114 aa10.04□□□□□ -0.8
HMGN1-214ENST00000482733 NCR3O14931 201 aa10.04□□□□□ -0.8
HMGN1-214ENST00000482733 NDUFC2O95298 119 aa10.04□□□□□ -0.8
HMGN1-214ENST00000482733 UBE2AP49459 152 aa10.04□□□□□ -0.8
HMGN1-214ENST00000482733 ADAMTSL4-AS1Q5T5F5 129 aa10.04□□□□□ -0.8
HMGN1-214ENST00000482733 SPANXB1Q9NS25 103 aaPredicted RBP10.03□□□□□ -0.8
HMGN1-214ENST00000482733 HSBP1L1C9JCN9 74 aa10.02□□□□□ -0.81
HMGN1-214ENST00000482733 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
HMGN1-214ENST00000482733 S100A12P80511 92 aa10.02□□□□□ -0.81
HMGN1-214ENST00000482733 LITAFQ99732 161 aa10.02□□□□□ -0.81
HMGN1-214ENST00000482733 TTTY13Q9BZ97 58 aa10.02□□□□□ -0.81
HMGN1-214ENST00000482733 PRYO14603 147 aa10.01□□□□□ -0.81
HMGN1-214ENST00000482733 SCGB1D4Q6XE38 83 aa10.01□□□□□ -0.81
HMGN1-214ENST00000482733 FAM19A1Q7Z5A9 133 aa10.01□□□□□ -0.81
HMGN1-214ENST00000482733 KRTAP13-1Q8IUC0 172 aa10.01□□□□□ -0.81
HMGN1-214ENST00000482733 KRTAP10-8P60410 259 aa10□□□□□ -0.81
HMGN1-214ENST00000482733 SOSTDC1Q6X4U4 206 aa10□□□□□ -0.81
HMGN1-214ENST00000482733 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
HMGN1-214ENST00000482733 NPC2P61916 151 aa9.99□□□□□ -0.81
HMGN1-214ENST00000482733 LINC00308Q8TCZ7 52 aa9.99□□□□□ -0.81
HMGN1-214ENST00000482733 TRBV10-3A0A0K0K1G6 114 aa9.98□□□□□ -0.81
HMGN1-214ENST00000482733 SCGB1D1O95968 90 aa9.98□□□□□ -0.81
HMGN1-214ENST00000482733 DDTP30046 118 aa9.98□□□□□ -0.81
HMGN1-214ENST00000482733 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
HMGN1-214ENST00000482733 S100A7L2Q5SY68 101 aa9.97□□□□□ -0.81
HMGN1-214ENST00000482733 PCP2Q8IVA1 136 aa9.97□□□□□ -0.81
HMGN1-214ENST00000482733 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
HMGN1-214ENST00000482733 SPANXCQ9NY87 97 aa9.97□□□□□ -0.81
HMGN1-214ENST00000482733 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-214ENST00000482733 SPRR1AP35321 89 aa9.96□□□□□ -0.82
HMGN1-214ENST00000482733 PRLHP81277 87 aa9.96□□□□□ -0.82
HMGN1-214ENST00000482733 Q6ZVH6 145 aa9.96□□□□□ -0.82
HMGN1-214ENST00000482733 LINC00337Q8N6G1 96 aa9.96□□□□□ -0.82
HMGN1-214ENST00000482733 SPANXDQ9BXN6 97 aa9.96□□□□□ -0.82
HMGN1-214ENST00000482733 CBY1Q9Y3M2 126 aa9.95□□□□□ -0.82
HMGN1-214ENST00000482733 ETDCA0A1B0GVM5 59 aa9.94□□□□□ -0.82
HMGN1-214ENST00000482733 IGLV6-57P01721 117 aa9.94□□□□□ -0.82
HMGN1-214ENST00000482733 IFITM1P13164 125 aa9.94□□□□□ -0.82
HMGN1-214ENST00000482733 RPL13AP40429 203 aaKnown RBP9.94□□□□□ -0.82
HMGN1-214ENST00000482733 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
HMGN1-214ENST00000482733 PPDPFQ9H3Y8 114 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms