RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PTTG1IPP53801 180 aa12.71□□□□□ -0.38
TRAPPC12-220ENST00000482645 Q6ZRP5 223 aa12.71□□□□□ -0.38
TRAPPC12-220ENST00000482645 TLX1NBP0CAT3 122 aa12.7□□□□□ -0.38
TRAPPC12-220ENST00000482645 SRSF9Q13242 221 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAPPC12-220ENST00000482645 SPACA4Q8TDM5 124 aa12.69□□□□□ -0.38
TRAPPC12-220ENST00000482645 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
TRAPPC12-220ENST00000482645 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC12-220ENST00000482645 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
TRAPPC12-220ENST00000482645 XGP55808 180 aa12.68□□□□□ -0.38
TRAPPC12-220ENST00000482645 SCXQ7RTU7 201 aa12.68□□□□□ -0.38
TRAPPC12-220ENST00000482645 HIST1H4GQ99525 98 aa12.68□□□□□ -0.38
TRAPPC12-220ENST00000482645 SND1-IT1Q9HBX3 110 aa12.68□□□□□ -0.38
TRAPPC12-220ENST00000482645 KIAA1109Q2LD37 5005 aa12.68□□□□□ -0.38
TRAPPC12-220ENST00000482645 XAGE1AQ9HD64 81 aa12.67□□□□□ -0.38
TRAPPC12-220ENST00000482645 LINC00474Q9P2X8 69 aa12.67□□□□□ -0.38
TRAPPC12-220ENST00000482645 CDK2AP2O75956 126 aa12.67□□□□□ -0.38
TRAPPC12-220ENST00000482645 CIRBP-AS1Q8TBR5 109 aa12.66□□□□□ -0.38
TRAPPC12-220ENST00000482645 HSPG2P98160 4391 aa12.66□□□□□ -0.38
TRAPPC12-220ENST00000482645 A0A087WYN8 130 aa12.65□□□□□ -0.38
TRAPPC12-220ENST00000482645 DDTP30046 118 aa12.65□□□□□ -0.38
TRAPPC12-220ENST00000482645 LINC00308Q8TCZ7 52 aa12.65□□□□□ -0.38
TRAPPC12-220ENST00000482645 RYR1P21817 5038 aa12.64□□□□□ -0.39
TRAPPC12-220ENST00000482645 SOSTDC1Q6X4U4 206 aa12.64□□□□□ -0.39
TRAPPC12-220ENST00000482645 Q6ZVH6 145 aa12.64□□□□□ -0.39
TRAPPC12-220ENST00000482645 EIF4EBP3O60516 100 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC12-220ENST00000482645 HSD52Q0P140 79 aa12.63□□□□□ -0.39
TRAPPC12-220ENST00000482645 C9orf129Q5T035 196 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-220ENST00000482645 MUSTN1Q8IVN3 82 aa12.62□□□□□ -0.39
TRAPPC12-220ENST00000482645 IFITM1P13164 125 aa12.61□□□□□ -0.39
TRAPPC12-220ENST00000482645 TAL2Q16559 108 aa12.61□□□□□ -0.39
TRAPPC12-220ENST00000482645 COPS9Q8WXC6 57 aa12.61□□□□□ -0.39
TRAPPC12-220ENST00000482645 FAM168BA1KXE4 195 aa12.6□□□□□ -0.39
TRAPPC12-220ENST00000482645 SMR3BP02814 79 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-220ENST00000482645 A0A1W2PNN7 141 aa12.58□□□□□ -0.4
TRAPPC12-220ENST00000482645 FAM19A5Q7Z5A7 132 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-220ENST00000482645 CEND1Q8N111 149 aa12.58□□□□□ -0.4
TRAPPC12-220ENST00000482645 PLAC8Q9NZF1 115 aa12.58□□□□□ -0.4
TRAPPC12-220ENST00000482645 RPL24P83731 157 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-220ENST00000482645 Q8NDZ9 215 aa12.57□□□□□ -0.4
TRAPPC12-220ENST00000482645 LOC107984156A0A0G2JMH3 177 aa12.56□□□□□ -0.4
TRAPPC12-220ENST00000482645 ARL17AQ8IVW1 177 aa12.56□□□□□ -0.4
TRAPPC12-220ENST00000482645 SERTAD4-AS1Q5TG53 156 aa12.55□□□□□ -0.4
TRAPPC12-220ENST00000482645 A4D1N5 150 aa12.54□□□□□ -0.4
TRAPPC12-220ENST00000482645 NCR3O14931 201 aa12.54□□□□□ -0.4
TRAPPC12-220ENST00000482645 HINT1P49773 126 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC12-220ENST00000482645 FXYD2P54710 66 aa12.54□□□□□ -0.4
TRAPPC12-220ENST00000482645 PPDPFQ9H3Y8 114 aa12.53□□□□□ -0.4
TRAPPC12-220ENST00000482645 FAT1Q14517 4588 aa12.52□□□□□ -0.41
TRAPPC12-220ENST00000482645 M0R143 59 aa12.52□□□□□ -0.41
TRAPPC12-220ENST00000482645 VPREB1P12018 145 aa12.52□□□□□ -0.41
TRAPPC12-220ENST00000482645 PRR3P79522 188 aaKnown RBP12.52□□□□□ -0.41
TRAPPC12-220ENST00000482645 TMEM238LA0A1B0GVL6 79 aa12.51□□□□□ -0.41
TRAPPC12-220ENST00000482645 A6NJY4 79 aa12.51□□□□□ -0.41
TRAPPC12-220ENST00000482645 BVES-AS1Q5T3Y7 98 aa12.51□□□□□ -0.41
TRAPPC12-220ENST00000482645 KRTAP7-1Q8IUC3 87 aa12.51□□□□□ -0.41
TRAPPC12-220ENST00000482645 LINC00528Q8N1L1 170 aa12.51□□□□□ -0.41
TRAPPC12-220ENST00000482645 M0QXV9 152 aa12.5□□□□□ -0.41
TRAPPC12-220ENST00000482645 NDUFC2O95298 119 aa12.5□□□□□ -0.41
TRAPPC12-220ENST00000482645 BATFQ16520 125 aa12.5□□□□□ -0.41
TRAPPC12-220ENST00000482645 PHF5AQ7RTV0 110 aaKnown RBP12.5□□□□□ -0.41
TRAPPC12-220ENST00000482645 NKAPP1Q8N9T2 125 aa12.5□□□□□ -0.41
TRAPPC12-220ENST00000482645 PLA2G2DQ9UNK4 145 aa12.5□□□□□ -0.41
TRAPPC12-220ENST00000482645 IGKV2-28A0A075B6P5 120 aa12.47□□□□□ -0.41
TRAPPC12-220ENST00000482645 IGKV2D-28P01615 120 aa12.47□□□□□ -0.41
TRAPPC12-220ENST00000482645 C7orf33Q8WU49 177 aa12.47□□□□□ -0.41
TRAPPC12-220ENST00000482645 NHP2Q9NX24 153 aaKnown RBP12.47□□□□□ -0.41
TRAPPC12-220ENST00000482645 HERC2O95714 4834 aa12.46□□□□□ -0.41
TRAPPC12-220ENST00000482645 IGLV5-37A0A075B6J1 123 aa12.46□□□□□ -0.42
TRAPPC12-220ENST00000482645 EPM2AB3EWF7 344 aa12.46□□□□□ -0.42
TRAPPC12-220ENST00000482645 Q8N1X5 172 aa12.46□□□□□ -0.42
TRAPPC12-220ENST00000482645 KRTAP17-1Q9BYP8 105 aa12.46□□□□□ -0.42
TRAPPC12-220ENST00000482645 C22orf24Q9Y442 160 aa12.46□□□□□ -0.42
TRAPPC12-220ENST00000482645 VPS13BQ7Z7G8 4022 aa12.45□□□□□ -0.42
TRAPPC12-220ENST00000482645 GAGE10A6NGK3 116 aa12.45□□□□□ -0.42
TRAPPC12-220ENST00000482645 FAM229AH3BQW9 127 aa12.45□□□□□ -0.42
TRAPPC12-220ENST00000482645 K7ERJ3 54 aa12.45□□□□□ -0.42
TRAPPC12-220ENST00000482645 LINC00337Q8N6G1 96 aa12.45□□□□□ -0.42
TRAPPC12-220ENST00000482645 CFC1BP0CG36 223 aa12.44□□□□□ -0.42
TRAPPC12-220ENST00000482645 CFC1P0CG37 223 aa12.44□□□□□ -0.42
TRAPPC12-220ENST00000482645 Q5VSD8 79 aa12.44□□□□□ -0.42
TRAPPC12-220ENST00000482645 RAB37Q96AX2 223 aa12.44□□□□□ -0.42
TRAPPC12-220ENST00000482645 TRBV10-2A0A0K0K1G8 114 aa12.43□□□□□ -0.42
TRAPPC12-220ENST00000482645 UBE2BP63146 152 aa12.43□□□□□ -0.42
TRAPPC12-220ENST00000482645 LBHQ53QV2 105 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC12-220ENST00000482645 MRPL55Q7Z7F7 128 aaKnown RBP12.43□□□□□ -0.42
TRAPPC12-220ENST00000482645 A0A0B4J2C4 111 aa12.42□□□□□ -0.42
TRAPPC12-220ENST00000482645 A6NDN8 102 aa12.42□□□□□ -0.42
TRAPPC12-220ENST00000482645 M0R378 163 aa12.42□□□□□ -0.42
TRAPPC12-220ENST00000482645 OR13C6PQ8NH95 151 aa12.42□□□□□ -0.42
TRAPPC12-220ENST00000482645 S100A7L2Q5SY68 101 aa12.42□□□□□ -0.42
TRAPPC12-220ENST00000482645 RPL37AP61513 92 aaKnown RBP12.41□□□□□ -0.42
TRAPPC12-220ENST00000482645 TRAV13-2A0A0B4J235 113 aa12.4□□□□□ -0.42
TRAPPC12-220ENST00000482645 RPL13AP40429 203 aaKnown RBP12.4□□□□□ -0.42
TRAPPC12-220ENST00000482645 SNHG12Q9BXW3 62 aa12.4□□□□□ -0.42
TRAPPC12-220ENST00000482645 TRBV10-3A0A0K0K1G6 114 aa12.39□□□□□ -0.43
TRAPPC12-220ENST00000482645 LINC00167Q96N53 147 aa12.39□□□□□ -0.43
TRAPPC12-220ENST00000482645 A0A1B0GWB2 263 aa12.38□□□□□ -0.43
TRAPPC12-220ENST00000482645 RPL37AP8A6NKH3 93 aa12.38□□□□□ -0.43
TRAPPC12-220ENST00000482645 PLA2G1BP04054 148 aaKnown RBP12.38□□□□□ -0.43
TRAPPC12-220ENST00000482645 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms