RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 C6orf223Q8N319 242 aa10.09□□□□□ -0.79
ATG4B-220ENST00000482507 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
ATG4B-220ENST00000482507 NDUFC2O95298 119 aa10.09□□□□□ -0.79
ATG4B-220ENST00000482507 DAD1P61803 113 aa10.09□□□□□ -0.79
ATG4B-220ENST00000482507 Q8N814 137 aa10.09□□□□□ -0.79
ATG4B-220ENST00000482507 COX17Q14061 63 aa10.08□□□□□ -0.8
ATG4B-220ENST00000482507 Q8NAQ8 132 aa10.08□□□□□ -0.8
ATG4B-220ENST00000482507 IGKV3D-7A0A0C4DH55 119 aa10.08□□□□□ -0.8
ATG4B-220ENST00000482507 DNAH3Q8TD57 4116 aa10.07□□□□□ -0.8
ATG4B-220ENST00000482507 HIST1H4AP62805 103 aaKnown RBP10.07□□□□□ -0.8
ATG4B-220ENST00000482507 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
ATG4B-220ENST00000482507 TMEM126AQ9H061 195 aa10.06□□□□□ -0.8
ATG4B-220ENST00000482507 HTN3P15516 51 aa10.06□□□□□ -0.8
ATG4B-220ENST00000482507 C6orf99Q4VX62 202 aa10.05□□□□□ -0.8
ATG4B-220ENST00000482507 APOC4P55056 127 aa10.04□□□□□ -0.8
ATG4B-220ENST00000482507 CCKP06307 115 aa10.04□□□□□ -0.8
ATG4B-220ENST00000482507 Q6JHZ5 121 aa10.04□□□□□ -0.8
ATG4B-220ENST00000482507 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
ATG4B-220ENST00000482507 A0A087WVE0 104 aa10.03□□□□□ -0.8
ATG4B-220ENST00000482507 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
ATG4B-220ENST00000482507 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
ATG4B-220ENST00000482507 A0A1B0GX51 115 aa10.03□□□□□ -0.8
ATG4B-220ENST00000482507 KLK12Q9UKR0 248 aa10.02□□□□□ -0.81
ATG4B-220ENST00000482507 MIFP14174 115 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 LELP1Q5T871 98 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 ENHOQ6UWT2 76 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 UQCRQO14949 82 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 C9orf153Q5TBE3 101 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 SMIM20Q8N5G0 67 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 MRAPQ8TCY5 172 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 RETNQ9HD89 108 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 PRR34Q9NV39 138 aa10.01□□□□□ -0.81
ATG4B-220ENST00000482507 K7EIL1 84 aa10□□□□□ -0.81
ATG4B-220ENST00000482507 LINC00575Q6W349 94 aa10□□□□□ -0.81
ATG4B-220ENST00000482507 TMEM256-PLSCR3K7ERE1 68 aa9.99□□□□□ -0.81
ATG4B-220ENST00000482507 SPART-AS1P0CW21 52 aa9.99□□□□□ -0.81
ATG4B-220ENST00000482507 S100A7L2Q5SY68 101 aa9.99□□□□□ -0.81
ATG4B-220ENST00000482507 TENM3Q9P273 2699 aa9.99□□□□□ -0.81
ATG4B-220ENST00000482507 A0A0J9YWU9 116 aa9.99□□□□□ -0.81
ATG4B-220ENST00000482507 COX7CP15954 63 aa9.98□□□□□ -0.81
ATG4B-220ENST00000482507 JMJD7-PLA2G4BH0Y9G9 81 aa9.98□□□□□ -0.81
ATG4B-220ENST00000482507 RPL18AQ02543 176 aaKnown RBP9.98□□□□□ -0.81
ATG4B-220ENST00000482507 ATOX1O00244 68 aa9.96□□□□□ -0.81
ATG4B-220ENST00000482507 IGLV6-57P01721 117 aa9.96□□□□□ -0.81
ATG4B-220ENST00000482507 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.82
ATG4B-220ENST00000482507 KPRPQ5T749 579 aaPredicted RBP9.95□□□□□ -0.82
ATG4B-220ENST00000482507 LYPD5Q6UWN5 251 aa9.95□□□□□ -0.82
ATG4B-220ENST00000482507 CYSTM1Q9H1C7 97 aa9.95□□□□□ -0.82
ATG4B-220ENST00000482507 hADV29S1A0JD25 119 aa9.94□□□□□ -0.82
ATG4B-220ENST00000482507 XAGE1AQ9HD64 81 aa9.94□□□□□ -0.82
ATG4B-220ENST00000482507 M0R2N4 97 aa9.93□□□□□ -0.82
ATG4B-220ENST00000482507 TRBV10-3A0A0K0K1G6 114 aa9.93□□□□□ -0.82
ATG4B-220ENST00000482507 KRTAP21-3Q3LHN1 58 aa9.93□□□□□ -0.82
ATG4B-220ENST00000482507 MEGF8Q7Z7M0 2845 aa9.92□□□□□ -0.82
ATG4B-220ENST00000482507 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
ATG4B-220ENST00000482507 USP17L23D6RBM5 183 aa9.92□□□□□ -0.82
ATG4B-220ENST00000482507 CRYGAP11844 174 aa9.91□□□□□ -0.82
ATG4B-220ENST00000482507 Q6ZQT0 140 aa9.91□□□□□ -0.82
ATG4B-220ENST00000482507 WFDC10BQ8IUB3 73 aa9.91□□□□□ -0.82
ATG4B-220ENST00000482507 MUC7Q8TAX7 377 aa9.91□□□□□ -0.82
ATG4B-220ENST00000482507 FAM19A1Q7Z5A9 133 aa9.91□□□□□ -0.82
ATG4B-220ENST00000482507 HIGD2BQ4VC39 106 aa9.9□□□□□ -0.82
ATG4B-220ENST00000482507 Q6ZQY7 126 aa9.9□□□□□ -0.82
ATG4B-220ENST00000482507 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
ATG4B-220ENST00000482507 RBM3P98179 157 aaKnown RBP9.89□□□□□ -0.83
ATG4B-220ENST00000482507 KRTAP26-1Q6PEX3 210 aa9.89□□□□□ -0.83
ATG4B-220ENST00000482507 COL7A1Q02388 2944 aa9.88□□□□□ -0.83
ATG4B-220ENST00000482507 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
ATG4B-220ENST00000482507 UPK3BQ9BT76 320 aa9.88□□□□□ -0.83
ATG4B-220ENST00000482507 LAMTOR3Q9UHA4 124 aa9.88□□□□□ -0.83
ATG4B-220ENST00000482507 TRAV23DV6A0A075B6W5 121 aa9.87□□□□□ -0.83
ATG4B-220ENST00000482507 LOC110117498A0A087WWA1 95 aa9.87□□□□□ -0.83
ATG4B-220ENST00000482507 C5orf47Q569G3 176 aa9.87□□□□□ -0.83
ATG4B-220ENST00000482507 ATP5EP2Q5VTU8 51 aa9.86□□□□□ -0.83
ATG4B-220ENST00000482507 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
ATG4B-220ENST00000482507 PRKDCP78527 4128 aaKnown RBP9.85□□□□□ -0.83
ATG4B-220ENST00000482507 VPREB1P12018 145 aa9.85□□□□□ -0.83
ATG4B-220ENST00000482507 DIRC1Q969H9 104 aa9.85□□□□□ -0.83
ATG4B-220ENST00000482507 UBL5Q9BZL1 73 aa9.85□□□□□ -0.83
ATG4B-220ENST00000482507 ZNF73O43830 326 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-220ENST00000482507 Q6ZRU5 148 aa9.84□□□□□ -0.83
ATG4B-220ENST00000482507 Q6ZTC4 211 aa9.84□□□□□ -0.83
ATG4B-220ENST00000482507 CAMK2N2Q96S95 79 aa9.84□□□□□ -0.83
ATG4B-220ENST00000482507 C15orf56Q8N910 161 aa9.84□□□□□ -0.83
ATG4B-220ENST00000482507 STAB2Q8WWQ8 2551 aa9.83□□□□□ -0.84
ATG4B-220ENST00000482507 TM2D3Q9BRN9 247 aa9.82□□□□□ -0.84
ATG4B-220ENST00000482507 ELOF1P60002 83 aaKnown RBP9.82□□□□□ -0.84
ATG4B-220ENST00000482507 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
ATG4B-220ENST00000482507 COX7BP24311 80 aa9.81□□□□□ -0.84
ATG4B-220ENST00000482507 ESRGQ1W209 222 aa9.81□□□□□ -0.84
ATG4B-220ENST00000482507 DNAH9Q9NYC9 4486 aa9.81□□□□□ -0.84
ATG4B-220ENST00000482507 GHRHP01286 108 aa9.81□□□□□ -0.84
ATG4B-220ENST00000482507 Q6ZVQ6 151 aa9.8□□□□□ -0.84
ATG4B-220ENST00000482507 DSCR8Q96T75 97 aa9.8□□□□□ -0.84
ATG4B-220ENST00000482507 H3BNG1 76 aa9.8□□□□□ -0.84
ATG4B-220ENST00000482507 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
ATG4B-220ENST00000482507 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.78□□□□□ -0.84
ATG4B-220ENST00000482507 TRBV7-4A0A0J9YYF1 115 aa9.77□□□□□ -0.84
ATG4B-220ENST00000482507 Q6ZRP5 223 aa9.77□□□□□ -0.84
ATG4B-220ENST00000482507 NDUFC2-KCTD14E9PQ53 114 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms