RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 HIST1H2BJP06899 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST1H2BOP23527 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST1H2BBP33778 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST1H2BDP58876 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST1H2BCP62807 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST2H2BEQ16778 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST1H2BHQ93079 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST1H2BNQ99877 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 HIST1H2BMQ99879 126 aa7.71□□□□□ -1.18
ABCF3-215ENST00000481116 SFTA2Q6UW10 78 aa7.7□□□□□ -1.18
ABCF3-215ENST00000481116 PMCHL2Q9BQD1 86 aa7.7□□□□□ -1.18
ABCF3-215ENST00000481116 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
ABCF3-215ENST00000481116 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
ABCF3-215ENST00000481116 TMEM238C9JI98 176 aa7.68□□□□□ -1.18
ABCF3-215ENST00000481116 S100A1P23297 94 aa7.68□□□□□ -1.18
ABCF3-215ENST00000481116 RPL28P46779 137 aaKnown RBP7.68□□□□□ -1.18
ABCF3-215ENST00000481116 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
ABCF3-215ENST00000481116 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
ABCF3-215ENST00000481116 MEIG1Q5JSS6 88 aa7.68□□□□□ -1.18
ABCF3-215ENST00000481116 UBE2AP49459 152 aa7.67□□□□□ -1.18
ABCF3-215ENST00000481116 NDUFA12Q9UI09 145 aa7.67□□□□□ -1.18
ABCF3-215ENST00000481116 PLNP26678 52 aa7.66□□□□□ -1.18
ABCF3-215ENST00000481116 KRTAP13-1Q8IUC0 172 aa7.66□□□□□ -1.18
ABCF3-215ENST00000481116 MIR7-3HGQ8N6C7 128 aa7.66□□□□□ -1.18
ABCF3-215ENST00000481116 ANAPC11Q9NYG5 84 aa7.66□□□□□ -1.18
ABCF3-215ENST00000481116 LEPROTO15243 131 aa7.65□□□□□ -1.18
ABCF3-215ENST00000481116 ATP6V1G1O75348 118 aa7.65□□□□□ -1.18
ABCF3-215ENST00000481116 DPM2O94777 84 aa7.65□□□□□ -1.18
ABCF3-215ENST00000481116 HERV-K104P63124 156 aa7.65□□□□□ -1.18
ABCF3-215ENST00000481116 PRLHP81277 87 aa7.65□□□□□ -1.18
ABCF3-215ENST00000481116 COA6Q5JTJ3 125 aaKnown RBP7.65□□□□□ -1.18
ABCF3-215ENST00000481116 MAP1LC3CQ9BXW4 147 aa7.65□□□□□ -1.18
ABCF3-215ENST00000481116 TMEM126AQ9H061 195 aa7.65□□□□□ -1.18
ABCF3-215ENST00000481116 A0A087X002 238 aa7.64□□□□□ -1.19
ABCF3-215ENST00000481116 MYMXA0A1B0GTQ4 84 aa7.64□□□□□ -1.19
ABCF3-215ENST00000481116 M0R378 163 aa7.64□□□□□ -1.19
ABCF3-215ENST00000481116 IGKCP01834 107 aa7.64□□□□□ -1.19
ABCF3-215ENST00000481116 FAM19A1Q7Z5A9 133 aa7.64□□□□□ -1.19
ABCF3-215ENST00000481116 NCR3O14931 201 aa7.63□□□□□ -1.19
ABCF3-215ENST00000481116 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
ABCF3-215ENST00000481116 DAND5Q8N907 189 aa7.63□□□□□ -1.19
ABCF3-215ENST00000481116 LRP2P98164 4655 aa7.62□□□□□ -1.19
ABCF3-215ENST00000481116 J3QQQ9 107 aa7.62□□□□□ -1.19
ABCF3-215ENST00000481116 RPL13AP40429 203 aaKnown RBP7.62□□□□□ -1.19
ABCF3-215ENST00000481116 PLEKHB2Q96CS7 222 aa7.62□□□□□ -1.19
ABCF3-215ENST00000481116 SYS1-DBNDD2H3BUS1 97 aa7.61□□□□□ -1.19
ABCF3-215ENST00000481116 HERVK_113P61574 105 aa7.61□□□□□ -1.19
ABCF3-215ENST00000481116 LPAP08519 4548 aa7.6□□□□□ -1.19
ABCF3-215ENST00000481116 LINC00587B1AMM8 73 aa7.59□□□□□ -1.19
ABCF3-215ENST00000481116 CRYGAP11844 174 aa7.59□□□□□ -1.19
ABCF3-215ENST00000481116 LGALS3P17931 250 aaKnown RBP7.59□□□□□ -1.19
ABCF3-215ENST00000481116 KRTAP13-2Q52LG2 175 aa7.59□□□□□ -1.19
ABCF3-215ENST00000481116 TSPAN13O95857 204 aa7.58□□□□□ -1.2
ABCF3-215ENST00000481116 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
ABCF3-215ENST00000481116 PET117Q6UWS5 81 aa7.58□□□□□ -1.2
ABCF3-215ENST00000481116 TYMSOSQ8TAI1 123 aa7.58□□□□□ -1.2
ABCF3-215ENST00000481116 TRBV10-3A0A0K0K1G6 114 aa7.57□□□□□ -1.2
ABCF3-215ENST00000481116 NMUP48645 174 aa7.57□□□□□ -1.2
ABCF3-215ENST00000481116 HIGD2AQ9BW72 106 aa7.57□□□□□ -1.2
ABCF3-215ENST00000481116 E9PLD3 99 aa7.56□□□□□ -1.2
ABCF3-215ENST00000481116 C3orf79P0CE67 100 aa7.56□□□□□ -1.2
ABCF3-215ENST00000481116 NPC2P61916 151 aa7.56□□□□□ -1.2
ABCF3-215ENST00000481116 LOC107984156A0A0G2JMH3 177 aa7.55□□□□□ -1.2
ABCF3-215ENST00000481116 A0A0J9YXY3 114 aa7.55□□□□□ -1.2
ABCF3-215ENST00000481116 PRYO14603 147 aa7.55□□□□□ -1.2
ABCF3-215ENST00000481116 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
ABCF3-215ENST00000481116 ARL17AQ8IVW1 177 aa7.55□□□□□ -1.2
ABCF3-215ENST00000481116 IGKV2D-26A0A0A0MRZ7 120 aa7.54□□□□□ -1.2
ABCF3-215ENST00000481116 EIF4EBP3O60516 100 aaPredicted RBP7.54□□□□□ -1.2
ABCF3-215ENST00000481116 SOSTDC1Q6X4U4 206 aa7.54□□□□□ -1.2
ABCF3-215ENST00000481116 KCNQ1DNQ9H478 68 aa7.54□□□□□ -1.2
ABCF3-215ENST00000481116 SPRR1AP35321 89 aa7.53□□□□□ -1.2
ABCF3-215ENST00000481116 KRTDAPP60985 99 aa7.53□□□□□ -1.2
ABCF3-215ENST00000481116 PRR4Q16378 134 aa7.53□□□□□ -1.2
ABCF3-215ENST00000481116 FAM229BQ4G0N7 80 aa7.53□□□□□ -1.2
ABCF3-215ENST00000481116 KRTAP4-16G5E9R7 235 aaPredicted RBP7.52□□□□□ -1.21
ABCF3-215ENST00000481116 DDTP30046 118 aa7.52□□□□□ -1.21
ABCF3-215ENST00000481116 C3orf22Q8N5N4 141 aa7.52□□□□□ -1.21
ABCF3-215ENST00000481116 MIEN1Q9BRT3 115 aa7.52□□□□□ -1.21
ABCF3-215ENST00000481116 TTTY13Q9BZ97 58 aa7.52□□□□□ -1.21
ABCF3-215ENST00000481116 RNF213Q63HN8 5207 aa7.52□□□□□ -1.21
ABCF3-215ENST00000481116 ETDCA0A1B0GVM5 59 aa7.51□□□□□ -1.21
ABCF3-215ENST00000481116 C20orf202A1L168 122 aa7.51□□□□□ -1.21
ABCF3-215ENST00000481116 LINC00337Q8N6G1 96 aa7.51□□□□□ -1.21
ABCF3-215ENST00000481116 SMCR5Q8TEV8 140 aa7.51□□□□□ -1.21
ABCF3-215ENST00000481116 SPRR4Q96PI1 79 aa7.51□□□□□ -1.21
ABCF3-215ENST00000481116 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
ABCF3-215ENST00000481116 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
ABCF3-215ENST00000481116 AKR1D1P51857 326 aa7.49□□□□□ -1.21
ABCF3-215ENST00000481116 HIST3H2BBQ8N257 126 aa7.49□□□□□ -1.21
ABCF3-215ENST00000481116 LINC00304Q8N9R0 145 aa7.49□□□□□ -1.21
ABCF3-215ENST00000481116 LITAFQ99732 161 aa7.49□□□□□ -1.21
ABCF3-215ENST00000481116 ZNF815PA8K554 130 aa7.48□□□□□ -1.21
ABCF3-215ENST00000481116 B5MCH6 92 aa7.48□□□□□ -1.21
ABCF3-215ENST00000481116 NDUFC2O95298 119 aa7.48□□□□□ -1.21
ABCF3-215ENST00000481116 S100A7L2Q5SY68 101 aa7.48□□□□□ -1.21
ABCF3-215ENST00000481116 PPDPFQ9H3Y8 114 aa7.48□□□□□ -1.21
ABCF3-215ENST00000481116 ERC2-IT1O76042 136 aa7.47□□□□□ -1.21
ABCF3-215ENST00000481116 IGLV6-57P01721 117 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms