RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TMEM191AQ9H0A3 160 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 TMEM242Q9NWH2 141 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 BET1LQ9NYM9 111 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 PLAC8Q9NZF1 115 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 PIK3C2BO00750 1634 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 DLEC1Q9Y238 1755 aa0.19□□□□□ -2.38
CALD1-219ENST00000480638 NRXN2Q9P2S2 1712 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 PRXQ9BXM0 1461 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 GVQW2A0A096LPI5 108 aaPredicted RBP0.18□□□□□ -2.38
CALD1-219ENST00000480638 GUCA1AP43080 201 aaPredicted RBP0.18□□□□□ -2.38
CALD1-219ENST00000480638 FXYD6P3P58550 94 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 SELENOWP63302 87 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 SSBP1Q04837 148 aaKnown RBP0.18□□□□□ -2.38
CALD1-219ENST00000480638 ESPL1Q14674 2120 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 C4orf33Q8N1A6 199 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 KCNRGQ8N5I3 272 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 SPTSSBQ8NFR3 76 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 COX7B2Q8TF08 81 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 SPTSSAQ969W0 71 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 DSCR8Q96T75 97 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 SEC11CQ9BY50 192 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 COA4Q9NYJ1 87 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 PAIP2BQ9ULR5 123 aaKnown RBP0.18□□□□□ -2.38
CALD1-219ENST00000480638 MYOM3Q5VTT5 1437 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 ANKRD50Q9ULJ7 1429 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 NINQ8N4C6 2090 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 CDK5RAP2Q96SN8 1893 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 SYCP2Q9BX26 1530 aa0.18□□□□□ -2.38
CALD1-219ENST00000480638 ABCA9Q8IUA7 1624 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 DNAJC13O75165 2243 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 NDUFB6O95139 128 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 EDDM3BP56851 147 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 IQGAP2Q13576 1575 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 MEIG1Q5JSS6 88 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 ARL11Q969Q4 196 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 TSC22D3Q99576 134 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 PDCD10Q9BUL8 212 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 AGPAT4-IT1Q9H0P7 198 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 RPRMQ9NS64 109 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 CCDC167Q9P0B6 97 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 GOLGA4Q13439 2230 aaKnown RBP0.17□□□□□ -2.38
CALD1-219ENST00000480638 LAMB1P07942 1786 aa0.17□□□□□ -2.38
CALD1-219ENST00000480638 PLXNA2O75051 1894 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 CDC42BPGQ6DT37 1551 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 USF3Q68DE3 2245 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 TRGV1A0A0A0MS02 117 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 TRBV7-1A0A0A6YYK4 115 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 A0A1B0GV90 55 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 RBAKDNA6NC62 111 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 M0R2T5 61 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 SNCGO76070 127 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 PIPP12273 146 aaPredicted RBP0.16□□□□□ -2.38
CALD1-219ENST00000480638 CBLN1P23435 193 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 RBM3P98179 157 aaKnown RBP0.16□□□□□ -2.38
CALD1-219ENST00000480638 INSL4Q14641 139 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 KRTAP20-2Q3LI61 65 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 RPL7L1Q6DKI1 246 aaKnown RBP0.16□□□□□ -2.38
CALD1-219ENST00000480638 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 Q8N8P6 123 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 SNRNP25Q9BV90 132 aaKnown RBP0.16□□□□□ -2.38
CALD1-219ENST00000480638 ROCK2O75116 1388 aaKnown RBP0.16□□□□□ -2.38
CALD1-219ENST00000480638 TANC1Q9C0D5 1861 aa0.16□□□□□ -2.38
CALD1-219ENST00000480638 SCAPERQ9BY12 1400 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 BCORQ6W2J9 1755 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 TRBV10-3A0A0K0K1G6 114 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 FAM92AA1XBS5 289 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 A6NIN4 97 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 FAM25AB3EWG3 89 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 FAM25CB3EWG5 89 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 FAM25GB3EWG6 89 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 HCG22E2RYF7 251 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 F2Z2F3 143 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 LYNX1G3V0Z9 82 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 G3V318 75 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 DEFB121Q5J5C9 76 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 Q6AWC8 147 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 ZNF818PQ6ZRF7 136 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.15□□□□□ -2.39
CALD1-219ENST00000480638 PPP1R1CQ8WVI7 109 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 WFDC6Q9BQY6 131 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 BPESC1Q9GZL8 116 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 RERGLQ9H628 205 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 PROK2Q9HC23 129 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 LINC00312Q9Y6C7 94 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 SERP1Q9Y6X1 66 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 V9GYV3 84 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 TNCP24821 2201 aa0.15□□□□□ -2.39
CALD1-219ENST00000480638 DAPK1P53355 1430 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 NALCNQ8IZF0 1738 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 MCRIP1C9JLW8 97 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 IFNA17P01571 189 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 APODP05090 189 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 ACYP2P14621 99 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 CCL8P80075 99 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 FAM74A4Q5TZK3 123 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 RPL13AP3Q6NVV1 102 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 Q6ZRX8 168 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 VMO1Q7Z5L0 202 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 SMIM11BQ8TCY0 68 aa0.14□□□□□ -2.39
CALD1-219ENST00000480638 DEFB104AQ8WTQ1 72 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms