RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 HIGD1BQ9P298 99 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 PRKDCP78527 4128 aaKnown RBP3.36□□□□□ -1.87
COMMD3-212ENST00000479958 TRAV10A0A0B4J240 114 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 IGHV3OR16-9A0A0B4J2B5 98 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 K7ERJ3 54 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 CCL25O15444 150 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 ANGP03950 147 aaKnown RBP3.36□□□□□ -1.87
COMMD3-212ENST00000479958 LGALS3P17931 250 aaKnown RBP3.36□□□□□ -1.87
COMMD3-212ENST00000479958 HERVK_113P63121 156 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 HERV-K104P63124 156 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 ENHOQ6UWT2 76 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 KLK12Q9UKR0 248 aa3.36□□□□□ -1.87
COMMD3-212ENST00000479958 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 IGLL5B9A064 214 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 H3BNG1 76 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 TAX1BP3O14907 124 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 REG3AQ06141 175 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 HSD52Q0P140 79 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 SMAGPQ0VAQ4 97 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 ORAOV1Q8WV07 137 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 CHCHD10Q8WYQ3 142 aaPredicted RBP3.35□□□□□ -1.87
COMMD3-212ENST00000479958 ZNF625Q96I27 306 aaPredicted RBP3.35□□□□□ -1.87
COMMD3-212ENST00000479958 NAA38Q9BRA0 125 aaKnown RBP3.35□□□□□ -1.87
COMMD3-212ENST00000479958 NDUFA12Q9UI09 145 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 LINC00588Q9Y4M8 146 aa3.35□□□□□ -1.87
COMMD3-212ENST00000479958 DNAH7Q8WXX0 4024 aa3.34□□□□□ -1.87
COMMD3-212ENST00000479958 A0A0U1RRA0 63 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 H3BRM9 83 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 KRTAP10-1P60331 282 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 SS18Q15532 418 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 COL5A1-AS1Q5SY13 56 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 LCE1CQ5T751 118 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 ZFAND6Q6FIF0 208 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 SCGB1D4Q6XE38 83 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 DAND5Q8N907 189 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 Q8N9L7 120 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 LINC00526Q96FQ7 95 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 HIST1H4GQ99525 98 aa3.34□□□□□ -1.88
COMMD3-212ENST00000479958 TENM2Q9NT68 2774 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 PLECQ15149 4684 aaKnown RBP3.33□□□□□ -1.88
COMMD3-212ENST00000479958 NDUFA1O15239 70 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 NPC2P61916 151 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 SEC11AP67812 179 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 KRTAP26-1Q6PEX3 210 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 C2orf82Q6UX34 121 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 MUSTN1Q8IVN3 82 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 C6orf223Q8N319 242 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 COX7B2Q8TF08 81 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 RAB37Q96AX2 223 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 UBE2WQ96B02 151 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 TOMM7Q9P0U1 55 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 CSMD3Q7Z407 3707 aa3.33□□□□□ -1.88
COMMD3-212ENST00000479958 SMIM13P0DJ93 91 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 KIAA0087Q14695 138 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 KRTAP21-3Q3LHN1 58 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 CASC10Q5T4H9 136 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 SOSTDC1Q6X4U4 206 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 NHP2Q9NX24 153 aaKnown RBP3.32□□□□□ -1.88
COMMD3-212ENST00000479958 APLNQ9ULZ1 77 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 DNAH1Q9P2D7 4330 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 FBN3Q75N90 2809 aa3.32□□□□□ -1.88
COMMD3-212ENST00000479958 COX7A2LO14548 114 aa3.31□□□□□ -1.88
COMMD3-212ENST00000479958 TAL2Q16559 108 aa3.31□□□□□ -1.88
COMMD3-212ENST00000479958 C9orf116Q5BN46 136 aaPredicted RBP3.31□□□□□ -1.88
COMMD3-212ENST00000479958 C15orf53Q8NAA6 179 aa3.31□□□□□ -1.88
COMMD3-212ENST00000479958 SPANXB1Q9NS25 103 aaPredicted RBP3.31□□□□□ -1.88
COMMD3-212ENST00000479958 VPS13DQ5THJ4 4388 aa3.31□□□□□ -1.88
COMMD3-212ENST00000479958 STARD9Q9P2P6 4700 aa3.3□□□□□ -1.88
COMMD3-212ENST00000479958 A6NDN8 102 aa3.3□□□□□ -1.88
COMMD3-212ENST00000479958 PANO1I0J062 215 aa3.3□□□□□ -1.88
COMMD3-212ENST00000479958 APOMO95445 188 aa3.3□□□□□ -1.88
COMMD3-212ENST00000479958 MIAQ16674 131 aa3.3□□□□□ -1.88
COMMD3-212ENST00000479958 LINC01556Q5JQF7 62 aa3.3□□□□□ -1.88
COMMD3-212ENST00000479958 TGP01266 2768 aa3.3□□□□□ -1.88
COMMD3-212ENST00000479958 A0A1B0GWB2 263 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 H3BUT2 72 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 ZNF861PO60384 105 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 PFN2P35080 140 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 PRR4Q16378 134 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 C6orf226Q5I0X4 101 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 MEIG1Q5JSS6 88 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 UNQ6190/PRO20217Q6UXQ8 127 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 SPANXDQ9BXN6 97 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 SPANXCQ9NY87 97 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 KLK5Q9Y337 293 aaPredicted RBP3.29□□□□□ -1.88
COMMD3-212ENST00000479958 LYSTQ99698 3801 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 DNAH10Q8IVF4 4471 aa3.29□□□□□ -1.88
COMMD3-212ENST00000479958 IGKV2D-24A0A075B6R9 120 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 TMEM238C9JI98 176 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 TIMM17BO60830 172 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 CRPP02741 224 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 CCL18P55774 89 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 LINC00158P58513 81 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 SPAG11BQ08648 103 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 Q8IZM0 81 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
COMMD3-212ENST00000479958 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms