RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 C2orf91Q6ZV80 131 aa7.96□□□□□ -1.14
TRAPPC12-218ENST00000479897 DAND5Q8N907 189 aa7.96□□□□□ -1.14
TRAPPC12-218ENST00000479897 XAGE1AQ9HD64 81 aa7.96□□□□□ -1.14
TRAPPC12-218ENST00000479897 FAM30AQ9NZY2 134 aa7.96□□□□□ -1.14
TRAPPC12-218ENST00000479897 UQCR10Q9UDW1 63 aa7.96□□□□□ -1.14
TRAPPC12-218ENST00000479897 EPPK1P58107 5090 aaKnown RBP7.95□□□□□ -1.14
TRAPPC12-218ENST00000479897 IFITM1P13164 125 aa7.95□□□□□ -1.14
TRAPPC12-218ENST00000479897 COPS9Q8WXC6 57 aa7.95□□□□□ -1.14
TRAPPC12-218ENST00000479897 PLAC8Q9NZF1 115 aa7.95□□□□□ -1.14
TRAPPC12-218ENST00000479897 IGLV5-37A0A075B6J1 123 aa7.94□□□□□ -1.14
TRAPPC12-218ENST00000479897 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
TRAPPC12-218ENST00000479897 LINC00308Q8TCZ7 52 aa7.94□□□□□ -1.14
TRAPPC12-218ENST00000479897 A0A087WYN8 130 aa7.93□□□□□ -1.14
TRAPPC12-218ENST00000479897 MIEN1Q9BRT3 115 aa7.93□□□□□ -1.14
TRAPPC12-218ENST00000479897 NDUFC2O95298 119 aa7.92□□□□□ -1.14
TRAPPC12-218ENST00000479897 VPREB1P12018 145 aa7.92□□□□□ -1.14
TRAPPC12-218ENST00000479897 TAL2Q16559 108 aa7.92□□□□□ -1.14
TRAPPC12-218ENST00000479897 SCXQ7RTU7 201 aa7.92□□□□□ -1.14
TRAPPC12-218ENST00000479897 KRTAP7-1Q8IUC3 87 aa7.92□□□□□ -1.14
TRAPPC12-218ENST00000479897 A0A1W2PNN7 141 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 FAM168BA1KXE4 195 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 TSTD3H0UI37 97 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 EIF4EBP3O60516 100 aaPredicted RBP7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 RPL24P83731 157 aaKnown RBP7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 SRSF9Q13242 221 aaKnown RBP eCLIP7.91□□□□□ -1.145e-8■■■■□ 26
TRAPPC12-218ENST00000479897 SERTAD4-AS1Q5TG53 156 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 Q8NDZ9 215 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 CIRBP-AS1Q8TBR5 109 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 PRO1933Q9H354 126 aa7.91□□□□□ -1.14
TRAPPC12-218ENST00000479897 APOBP04114 4563 aaKnown RBP7.9□□□□□ -1.14
TRAPPC12-218ENST00000479897 FAM19A5Q7Z5A7 132 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC12-218ENST00000479897 M0QXV9 152 aa7.89□□□□□ -1.15
TRAPPC12-218ENST00000479897 HNRNPA3P51991 378 aaKnown RBP7.89□□□□□ -1.15
TRAPPC12-218ENST00000479897 XGP55808 180 aa7.89□□□□□ -1.15
TRAPPC12-218ENST00000479897 NPC2P61916 151 aa7.89□□□□□ -1.15
TRAPPC12-218ENST00000479897 HIST1H4GQ99525 98 aa7.89□□□□□ -1.15
TRAPPC12-218ENST00000479897 TRBV10-2A0A0K0K1G8 114 aa7.88□□□□□ -1.15
TRAPPC12-218ENST00000479897 HSD52Q0P140 79 aa7.88□□□□□ -1.15
TRAPPC12-218ENST00000479897 MUSTN1Q8IVN3 82 aa7.88□□□□□ -1.15
TRAPPC12-218ENST00000479897 NKAPP1Q8N9T2 125 aa7.88□□□□□ -1.15
TRAPPC12-218ENST00000479897 DPH3Q96FX2 82 aa7.88□□□□□ -1.15
TRAPPC12-218ENST00000479897 MRPL55Q7Z7F7 128 aaKnown RBP7.87□□□□□ -1.15
TRAPPC12-218ENST00000479897 C22orf24Q9Y442 160 aa7.87□□□□□ -1.15
TRAPPC12-218ENST00000479897 IGKV2-28A0A075B6P5 120 aa7.85□□□□□ -1.15
TRAPPC12-218ENST00000479897 M0R378 163 aa7.85□□□□□ -1.15
TRAPPC12-218ENST00000479897 IGKV2D-28P01615 120 aa7.85□□□□□ -1.15
TRAPPC12-218ENST00000479897 LBHQ53QV2 105 aaPredicted RBP7.85□□□□□ -1.15
TRAPPC12-218ENST00000479897 CEND1Q8N111 149 aa7.85□□□□□ -1.15
TRAPPC12-218ENST00000479897 C7orf33Q8WU49 177 aa7.85□□□□□ -1.15
TRAPPC12-218ENST00000479897 BIRC6Q9NR09 4857 aa7.84□□□□□ -1.15
TRAPPC12-218ENST00000479897 A4D1N5 150 aa7.84□□□□□ -1.15
TRAPPC12-218ENST00000479897 HAMPP81172 84 aa7.84□□□□□ -1.15
TRAPPC12-218ENST00000479897 PHF5AQ7RTV0 110 aaKnown RBP7.84□□□□□ -1.15
TRAPPC12-218ENST00000479897 RYR1P21817 5038 aa7.84□□□□□ -1.16
TRAPPC12-218ENST00000479897 NCR3O14931 201 aa7.83□□□□□ -1.16
TRAPPC12-218ENST00000479897 LINC00167Q96N53 147 aa7.83□□□□□ -1.16
TRAPPC12-218ENST00000479897 TMEM238LA0A1B0GVL6 79 aa7.82□□□□□ -1.16
TRAPPC12-218ENST00000479897 A6NJY4 79 aa7.82□□□□□ -1.16
TRAPPC12-218ENST00000479897 IGLV6-57P01721 117 aa7.82□□□□□ -1.16
TRAPPC12-218ENST00000479897 PRR3P79522 188 aaKnown RBP7.82□□□□□ -1.16
TRAPPC12-218ENST00000479897 LINC00337Q8N6G1 96 aa7.82□□□□□ -1.16
TRAPPC12-218ENST00000479897 IGLV1-50A0A075B6I6 118 aa7.81□□□□□ -1.16
TRAPPC12-218ENST00000479897 DDTP30046 118 aa7.81□□□□□ -1.16
TRAPPC12-218ENST00000479897 FXYD2P54710 66 aa7.81□□□□□ -1.16
TRAPPC12-218ENST00000479897 HSPG2P98160 4391 aa7.8□□□□□ -1.16
TRAPPC12-218ENST00000479897 A0A0B4J2C4 111 aa7.8□□□□□ -1.16
TRAPPC12-218ENST00000479897 UBE2BP63146 152 aa7.8□□□□□ -1.16
TRAPPC12-218ENST00000479897 CTAG1AP78358 180 aa7.8□□□□□ -1.16
TRAPPC12-218ENST00000479897 TMEM126AQ9H061 195 aa7.8□□□□□ -1.16
TRAPPC12-218ENST00000479897 TRAV13-2A0A0B4J235 113 aa7.79□□□□□ -1.16
TRAPPC12-218ENST00000479897 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
TRAPPC12-218ENST00000479897 GAGE10A6NGK3 116 aa7.79□□□□□ -1.16
TRAPPC12-218ENST00000479897 M0R143 59 aa7.79□□□□□ -1.16
TRAPPC12-218ENST00000479897 PRYO14603 147 aa7.79□□□□□ -1.16
TRAPPC12-218ENST00000479897 KCNQ1DNQ9H478 68 aa7.79□□□□□ -1.16
TRAPPC12-218ENST00000479897 CBY1Q9Y3M2 126 aa7.79□□□□□ -1.16
TRAPPC12-218ENST00000479897 KIAA1109Q2LD37 5005 aa7.78□□□□□ -1.16
TRAPPC12-218ENST00000479897 A0A1B0GWB2 263 aa7.78□□□□□ -1.16
TRAPPC12-218ENST00000479897 S100A7L2Q5SY68 101 aa7.78□□□□□ -1.16
TRAPPC12-218ENST00000479897 BVES-AS1Q5T3Y7 98 aa7.78□□□□□ -1.16
TRAPPC12-218ENST00000479897 KRTAP11-1Q8IUC1 163 aa7.78□□□□□ -1.16
TRAPPC12-218ENST00000479897 LINC00528Q8N1L1 170 aa7.78□□□□□ -1.16
TRAPPC12-218ENST00000479897 RPL37AP8A6NKH3 93 aa7.77□□□□□ -1.17
TRAPPC12-218ENST00000479897 CFC1BP0CG36 223 aa7.77□□□□□ -1.17
TRAPPC12-218ENST00000479897 CFC1P0CG37 223 aa7.77□□□□□ -1.17
TRAPPC12-218ENST00000479897 VPS13BQ7Z7G8 4022 aa7.76□□□□□ -1.17
TRAPPC12-218ENST00000479897 SPRR1AP35321 89 aa7.76□□□□□ -1.17
TRAPPC12-218ENST00000479897 PSORS1C2Q9UIG4 136 aa7.76□□□□□ -1.17
TRAPPC12-218ENST00000479897 TRAV23DV6A0A075B6W5 121 aa7.75□□□□□ -1.17
TRAPPC12-218ENST00000479897 REG3GQ6UW15 175 aa7.75□□□□□ -1.17
TRAPPC12-218ENST00000479897 OR13C6PQ8NH95 151 aa7.75□□□□□ -1.17
TRAPPC12-218ENST00000479897 A6NDN8 102 aa7.74□□□□□ -1.17
TRAPPC12-218ENST00000479897 KRTAP4-16G5E9R7 235 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-218ENST00000479897 SMR3BP02814 79 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-218ENST00000479897 HINT1P49773 126 aaPredicted RBP7.74□□□□□ -1.17
TRAPPC12-218ENST00000479897 RAB37Q96AX2 223 aa7.74□□□□□ -1.17
TRAPPC12-218ENST00000479897 NHP2Q9NX24 153 aaKnown RBP7.74□□□□□ -1.17
TRAPPC12-218ENST00000479897 RPL13AP40429 203 aaKnown RBP7.73□□□□□ -1.17
TRAPPC12-218ENST00000479897 KRTAP10-4P60372 401 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms