RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 GAGE10A6NGK3 116 aa11.6□□□□□ -0.55
AGRN-208ENST00000479707 KRTAP29-1A8MX34 341 aaPredicted RBP11.6□□□□□ -0.55
AGRN-208ENST00000479707 LGALS3P17931 250 aaKnown RBP11.6□□□□□ -0.55
AGRN-208ENST00000479707 HERV-K104P63124 156 aa11.6□□□□□ -0.55
AGRN-208ENST00000479707 MRPL55Q7Z7F7 128 aaKnown RBP11.6□□□□□ -0.55
AGRN-208ENST00000479707 NKAPP1Q8N9T2 125 aa11.59□□□□□ -0.55
AGRN-208ENST00000479707 LRP1Q07954 4544 aaKnown RBP11.59□□□□□ -0.55
AGRN-208ENST00000479707 RPL37AP8A6NKH3 93 aa11.58□□□□□ -0.56
AGRN-208ENST00000479707 SRSF9Q13242 221 aaKnown RBP eCLIP11.58□□□□□ -0.56
AGRN-208ENST00000479707 SPINK6Q6UWN8 80 aa11.58□□□□□ -0.56
AGRN-208ENST00000479707 LINC00167Q96N53 147 aa11.58□□□□□ -0.56
AGRN-208ENST00000479707 TP73-AS1Q9UF72 201 aa11.58□□□□□ -0.56
AGRN-208ENST00000479707 FAT3Q8TDW7 4589 aa11.57□□□□□ -0.56
AGRN-208ENST00000479707 OXTP01178 125 aa11.57□□□□□ -0.56
AGRN-208ENST00000479707 IGLV5-37A0A075B6J1 123 aa11.56□□□□□ -0.56
AGRN-208ENST00000479707 E9PLD3 99 aa11.56□□□□□ -0.56
AGRN-208ENST00000479707 IGLV7-43P04211 117 aa11.56□□□□□ -0.56
AGRN-208ENST00000479707 S100A6P06703 90 aa11.56□□□□□ -0.56
AGRN-208ENST00000479707 MIR7-3HGQ8N6C7 128 aa11.56□□□□□ -0.56
AGRN-208ENST00000479707 VPREB1P12018 145 aa11.55□□□□□ -0.56
AGRN-208ENST00000479707 S100A2P29034 98 aa11.55□□□□□ -0.56
AGRN-208ENST00000479707 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
AGRN-208ENST00000479707 Q8NDZ9 215 aa11.55□□□□□ -0.56
AGRN-208ENST00000479707 LINC00587B1AMM8 73 aa11.54□□□□□ -0.56
AGRN-208ENST00000479707 NMUP48645 174 aa11.54□□□□□ -0.56
AGRN-208ENST00000479707 RPL24P83731 157 aaKnown RBP11.54□□□□□ -0.56
AGRN-208ENST00000479707 C20orf202A1L168 122 aa11.53□□□□□ -0.56
AGRN-208ENST00000479707 DAND5Q8N907 189 aa11.53□□□□□ -0.56
AGRN-208ENST00000479707 ATOH7Q8N100 152 aa11.52□□□□□ -0.57
AGRN-208ENST00000479707 HIST1H2BLQ99880 126 aa11.52□□□□□ -0.57
AGRN-208ENST00000479707 IGKV2-28A0A075B6P5 120 aa11.51□□□□□ -0.57
AGRN-208ENST00000479707 IGKV2D-28P01615 120 aa11.51□□□□□ -0.57
AGRN-208ENST00000479707 SNRPEP62304 92 aaKnown RBP11.51□□□□□ -0.57
AGRN-208ENST00000479707 IGKV2D-26A0A0A0MRZ7 120 aa11.5□□□□□ -0.57
AGRN-208ENST00000479707 BOD1L2Q8IYS8 172 aa11.5□□□□□ -0.57
AGRN-208ENST00000479707 A0A0J9YXY3 114 aa11.49□□□□□ -0.57
AGRN-208ENST00000479707 REG3GQ6UW15 175 aa11.49□□□□□ -0.57
AGRN-208ENST00000479707 DMBT1Q9UGM3 2413 aaPredicted RBP11.49□□□□□ -0.57
AGRN-208ENST00000479707 TTTY13Q9BZ97 58 aa11.48□□□□□ -0.57
AGRN-208ENST00000479707 DIRC1Q969H9 104 aa11.47□□□□□ -0.57
AGRN-208ENST00000479707 IGLV1-50A0A075B6I6 118 aa11.46□□□□□ -0.57
AGRN-208ENST00000479707 NCR3O14931 201 aa11.46□□□□□ -0.57
AGRN-208ENST00000479707 NPC2P61916 151 aa11.46□□□□□ -0.57
AGRN-208ENST00000479707 ZNF815PA8K554 130 aa11.45□□□□□ -0.58
AGRN-208ENST00000479707 BCE1O60756 84 aa11.45□□□□□ -0.58
AGRN-208ENST00000479707 ANKRD39Q53RE8 183 aa11.45□□□□□ -0.58
AGRN-208ENST00000479707 H0Y9J4 135 aa11.44□□□□□ -0.58
AGRN-208ENST00000479707 M0R378 163 aa11.44□□□□□ -0.58
AGRN-208ENST00000479707 ZNF861PO60384 105 aa11.44□□□□□ -0.58
AGRN-208ENST00000479707 MT1HL1P0DM35 61 aa11.44□□□□□ -0.58
AGRN-208ENST00000479707 ADAMTSL4-AS1Q5T5F5 129 aa11.44□□□□□ -0.58
AGRN-208ENST00000479707 LINC01600Q96MT4 127 aa11.44□□□□□ -0.58
AGRN-208ENST00000479707 TMEM238C9JI98 176 aa11.43□□□□□ -0.58
AGRN-208ENST00000479707 C5orf52A6NGY3 159 aa11.42□□□□□ -0.58
AGRN-208ENST00000479707 MIEN1Q9BRT3 115 aa11.42□□□□□ -0.58
AGRN-208ENST00000479707 HERC1Q15751 4861 aa11.42□□□□□ -0.58
AGRN-208ENST00000479707 LOC107984156A0A0G2JMH3 177 aa11.41□□□□□ -0.58
AGRN-208ENST00000479707 AKR1D1P51857 326 aa11.41□□□□□ -0.58
AGRN-208ENST00000479707 ARL17AQ8IVW1 177 aa11.41□□□□□ -0.58
AGRN-208ENST00000479707 RPL28P46779 137 aaKnown RBP11.4□□□□□ -0.58
AGRN-208ENST00000479707 UBE2AP49459 152 aa11.4□□□□□ -0.58
AGRN-208ENST00000479707 TMEM126AQ9H061 195 aa11.4□□□□□ -0.58
AGRN-208ENST00000479707 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
AGRN-208ENST00000479707 SOSTDC1Q6X4U4 206 aa11.39□□□□□ -0.59
AGRN-208ENST00000479707 FAM19A1Q7Z5A9 133 aa11.39□□□□□ -0.59
AGRN-208ENST00000479707 LITAFQ99732 161 aa11.39□□□□□ -0.59
AGRN-208ENST00000479707 PRLHP81277 87 aa11.37□□□□□ -0.59
AGRN-208ENST00000479707 PCP2Q8IVA1 136 aa11.37□□□□□ -0.59
AGRN-208ENST00000479707 TMA7Q9Y2S6 64 aaKnown RBP11.37□□□□□ -0.59
AGRN-208ENST00000479707 TRBV10-3A0A0K0K1G6 114 aa11.36□□□□□ -0.59
AGRN-208ENST00000479707 TIMM17BO60830 172 aa11.36□□□□□ -0.59
AGRN-208ENST00000479707 SCGB1D1O95968 90 aa11.36□□□□□ -0.59
AGRN-208ENST00000479707 SCGB1D4Q6XE38 83 aa11.36□□□□□ -0.59
AGRN-208ENST00000479707 LINC00308Q8TCZ7 52 aa11.35□□□□□ -0.59
AGRN-208ENST00000479707 KRTAP10-8P60410 259 aa11.34□□□□□ -0.59
AGRN-208ENST00000479707 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
AGRN-208ENST00000479707 SPANXB1Q9NS25 103 aaPredicted RBP11.34□□□□□ -0.59
AGRN-208ENST00000479707 TNXBP22105 4242 aa11.33□□□□□ -0.59
AGRN-208ENST00000479707 HSBP1L1C9JCN9 74 aa11.33□□□□□ -0.6
AGRN-208ENST00000479707 NDUFC2O95298 119 aa11.33□□□□□ -0.6
AGRN-208ENST00000479707 KRTAP1-4P0C5Y4 121 aa11.33□□□□□ -0.6
AGRN-208ENST00000479707 PRR26Q8N8Z3 221 aa11.33□□□□□ -0.6
AGRN-208ENST00000479707 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
AGRN-208ENST00000479707 PRYO14603 147 aa11.32□□□□□ -0.6
AGRN-208ENST00000479707 DDTP30046 118 aa11.32□□□□□ -0.6
AGRN-208ENST00000479707 KCNQ1DNQ9H478 68 aa11.32□□□□□ -0.6
AGRN-208ENST00000479707 S100A7L2Q5SY68 101 aa11.31□□□□□ -0.6
AGRN-208ENST00000479707 S100A12P80511 92 aa11.29□□□□□ -0.6
AGRN-208ENST00000479707 SPANXDQ9BXN6 97 aa11.28□□□□□ -0.6
AGRN-208ENST00000479707 SPANXCQ9NY87 97 aa11.28□□□□□ -0.6
AGRN-208ENST00000479707 ETDCA0A1B0GVM5 59 aa11.27□□□□□ -0.61
AGRN-208ENST00000479707 HIGD2AQ9BW72 106 aa11.27□□□□□ -0.61
AGRN-208ENST00000479707 ANAPC11Q9NYG5 84 aa11.27□□□□□ -0.61
AGRN-208ENST00000479707 IGLV6-57P01721 117 aa11.26□□□□□ -0.61
AGRN-208ENST00000479707 SPRR1AP35321 89 aa11.26□□□□□ -0.61
AGRN-208ENST00000479707 LINC00337Q8N6G1 96 aa11.25□□□□□ -0.61
AGRN-208ENST00000479707 OR13C6PQ8NH95 151 aa11.25□□□□□ -0.61
AGRN-208ENST00000479707 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
AGRN-208ENST00000479707 KRTAP4-16G5E9R7 235 aaPredicted RBP11.23□□□□□ -0.61
AGRN-208ENST00000479707 TRAV23DV6A0A075B6W5 121 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms