RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 Q6ZRP5 223 aa5.63□□□□□ -1.51
DDX56-211ENST00000479602 LINC00526Q96FQ7 95 aa5.63□□□□□ -1.51
DDX56-211ENST00000479602 TOMM7Q9P0U1 55 aa5.63□□□□□ -1.51
DDX56-211ENST00000479602 TP73-AS1Q9UF72 201 aa5.63□□□□□ -1.51
DDX56-211ENST00000479602 RNF213Q63HN8 5207 aa5.62□□□□□ -1.51
DDX56-211ENST00000479602 A0A0J9YXY3 114 aa5.62□□□□□ -1.51
DDX56-211ENST00000479602 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
DDX56-211ENST00000479602 C14orf144Q96I85 54 aa5.62□□□□□ -1.51
DDX56-211ENST00000479602 PMCHL2Q9BQD1 86 aa5.62□□□□□ -1.51
DDX56-211ENST00000479602 ERG28Q9UKR5 140 aa5.62□□□□□ -1.51
DDX56-211ENST00000479602 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.62□□□□□ -1.51
DDX56-211ENST00000479602 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
DDX56-211ENST00000479602 Q6ZVH6 145 aa5.61□□□□□ -1.51
DDX56-211ENST00000479602 DLEU1O43261 78 aa5.6□□□□□ -1.51
DDX56-211ENST00000479602 SPATA45Q537H7 98 aa5.6□□□□□ -1.51
DDX56-211ENST00000479602 ATOH7Q8N100 152 aa5.6□□□□□ -1.51
DDX56-211ENST00000479602 A0A087WYN8 130 aa5.59□□□□□ -1.51
DDX56-211ENST00000479602 IGKV2D-26A0A0A0MRZ7 120 aa5.59□□□□□ -1.51
DDX56-211ENST00000479602 PANO1I0J062 215 aa5.59□□□□□ -1.51
DDX56-211ENST00000479602 MT1HL1P0DM35 61 aa5.59□□□□□ -1.51
DDX56-211ENST00000479602 HNRNPA3P51991 378 aaKnown RBP5.59□□□□□ -1.51
DDX56-211ENST00000479602 RPL18AQ02543 176 aaKnown RBP5.59□□□□□ -1.51
DDX56-211ENST00000479602 ANKRD39Q53RE8 183 aa5.59□□□□□ -1.51
DDX56-211ENST00000479602 C9orf129Q5T035 196 aaKnown RBP5.59□□□□□ -1.51
DDX56-211ENST00000479602 PAM16Q9Y3D7 125 aa5.59□□□□□ -1.51
DDX56-211ENST00000479602 STPG4Q8N801 248 aa5.58□□□□□ -1.52
DDX56-211ENST00000479602 LITAFQ99732 161 aa5.58□□□□□ -1.52
DDX56-211ENST00000479602 NDUFC2O95298 119 aa5.57□□□□□ -1.52
DDX56-211ENST00000479602 C9orf116Q5BN46 136 aaPredicted RBP5.57□□□□□ -1.52
DDX56-211ENST00000479602 MEIG1Q5JSS6 88 aa5.57□□□□□ -1.52
DDX56-211ENST00000479602 BOD1L2Q8IYS8 172 aa5.57□□□□□ -1.52
DDX56-211ENST00000479602 SND1-IT1Q9HBX3 110 aa5.57□□□□□ -1.52
DDX56-211ENST00000479602 TRBV10-2A0A0K0K1G8 114 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 ZNF815PA8K554 130 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 TMEM238C9JI98 176 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 CHTF8P0CG12 524 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 GAGE2BQ13066 116 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 MAJINQ3KP22 176 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 SLC25A34Q6PIV7 304 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 KRTAP7-1Q8IUC3 87 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 SPANXDQ9BXN6 97 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 SPANXB1Q9NS25 103 aaPredicted RBP5.56□□□□□ -1.52
DDX56-211ENST00000479602 SPANXCQ9NY87 97 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 UQCR10Q9UDW1 63 aa5.56□□□□□ -1.52
DDX56-211ENST00000479602 IGKV2-24A0A0C4DH68 120 aa5.55□□□□□ -1.52
DDX56-211ENST00000479602 COX8AP10176 69 aa5.55□□□□□ -1.52
DDX56-211ENST00000479602 VPREB1P12018 145 aa5.55□□□□□ -1.52
DDX56-211ENST00000479602 IFITM1P13164 125 aa5.55□□□□□ -1.52
DDX56-211ENST00000479602 RPL24P83731 157 aaKnown RBP5.55□□□□□ -1.52
DDX56-211ENST00000479602 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
DDX56-211ENST00000479602 MIR7-3HGQ8N6C7 128 aa5.55□□□□□ -1.52
DDX56-211ENST00000479602 PRO1933Q9H354 126 aa5.55□□□□□ -1.52
DDX56-211ENST00000479602 A0A1W2PNN7 141 aa5.54□□□□□ -1.52
DDX56-211ENST00000479602 M0R143 59 aa5.54□□□□□ -1.52
DDX56-211ENST00000479602 SMIM13P0DJ93 91 aa5.54□□□□□ -1.52
DDX56-211ENST00000479602 C7orf33Q8WU49 177 aa5.54□□□□□ -1.52
DDX56-211ENST00000479602 HIGD1BQ9P298 99 aa5.54□□□□□ -1.52
DDX56-211ENST00000479602 A0A1B0GV90 55 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 M0QXV9 152 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 PFN2P35080 140 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 LINC00158P58513 81 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 GAGE2EQ4V326 116 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 PCP2Q8IVA1 136 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 XAGE1AQ9HD64 81 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 GAGE2DQ9UEU5 116 aa5.53□□□□□ -1.52
DDX56-211ENST00000479602 RPL37AP61513 92 aaKnown RBP5.52□□□□□ -1.53
DDX56-211ENST00000479602 C4orf48Q5BLP8 95 aa5.52□□□□□ -1.53
DDX56-211ENST00000479602 MRPL55Q7Z7F7 128 aaKnown RBP5.52□□□□□ -1.53
DDX56-211ENST00000479602 MIEN1Q9BRT3 115 aa5.52□□□□□ -1.53
DDX56-211ENST00000479602 CBY1Q9Y3M2 126 aa5.52□□□□□ -1.53
DDX56-211ENST00000479602 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
DDX56-211ENST00000479602 FAM168BA1KXE4 195 aa5.5□□□□□ -1.53
DDX56-211ENST00000479602 M0R378 163 aa5.5□□□□□ -1.53
DDX56-211ENST00000479602 PRR3P79522 188 aaKnown RBP5.5□□□□□ -1.53
DDX56-211ENST00000479602 SRSF9Q13242 221 aaKnown RBP eCLIP5.5□□□□□ -1.53
DDX56-211ENST00000479602 TAL2Q16559 108 aa5.5□□□□□ -1.53
DDX56-211ENST00000479602 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
DDX56-211ENST00000479602 NKAPP1Q8N9T2 125 aa5.5□□□□□ -1.53
DDX56-211ENST00000479602 LINC00308Q8TCZ7 52 aa5.5□□□□□ -1.53
DDX56-211ENST00000479602 SNHG12Q9BXW3 62 aa5.5□□□□□ -1.53
DDX56-211ENST00000479602 IGLV1-50A0A075B6I6 118 aa5.49□□□□□ -1.53
DDX56-211ENST00000479602 A6NJY4 79 aa5.49□□□□□ -1.53
DDX56-211ENST00000479602 H0Y9J4 135 aa5.49□□□□□ -1.53
DDX56-211ENST00000479602 SPRR1AP35321 89 aa5.49□□□□□ -1.53
DDX56-211ENST00000479602 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
DDX56-211ENST00000479602 TTTY13Q9BZ97 58 aa5.49□□□□□ -1.53
DDX56-211ENST00000479602 KCNQ1DNQ9H478 68 aa5.49□□□□□ -1.53
DDX56-211ENST00000479602 TMEM238LA0A1B0GVL6 79 aa5.48□□□□□ -1.53
DDX56-211ENST00000479602 IGLV6-57P01721 117 aa5.48□□□□□ -1.53
DDX56-211ENST00000479602 FAM19A5Q7Z5A7 132 aaPredicted RBP5.48□□□□□ -1.53
DDX56-211ENST00000479602 Q8NDZ9 215 aa5.48□□□□□ -1.53
DDX56-211ENST00000479602 DPH3Q96FX2 82 aa5.48□□□□□ -1.53
DDX56-211ENST00000479602 HIST1H4GQ99525 98 aa5.48□□□□□ -1.53
DDX56-211ENST00000479602 PRYO14603 147 aa5.47□□□□□ -1.53
DDX56-211ENST00000479602 PHF5AQ7RTV0 110 aaKnown RBP5.47□□□□□ -1.53
DDX56-211ENST00000479602 LINC00337Q8N6G1 96 aa5.47□□□□□ -1.53
DDX56-211ENST00000479602 LINC00167Q96N53 147 aa5.47□□□□□ -1.53
DDX56-211ENST00000479602 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
DDX56-211ENST00000479602 KRTAP4-16G5E9R7 235 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms