RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
RUNX3-204ENST00000479341 CIRBP-AS1Q8TBR5 109 aa11.77□□□□□ -0.53
RUNX3-204ENST00000479341 PLAC8Q9NZF1 115 aa11.77□□□□□ -0.53
RUNX3-204ENST00000479341 DAND5Q8N907 189 aa11.76□□□□□ -0.53
RUNX3-204ENST00000479341 TP73-AS1Q9UF72 201 aa11.76□□□□□ -0.53
RUNX3-204ENST00000479341 FAM168BA1KXE4 195 aa11.75□□□□□ -0.53
RUNX3-204ENST00000479341 HAMPP81172 84 aa11.75□□□□□ -0.53
RUNX3-204ENST00000479341 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
RUNX3-204ENST00000479341 PLA2G2DQ9UNK4 145 aa11.75□□□□□ -0.53
RUNX3-204ENST00000479341 LOC107984156A0A0G2JMH3 177 aa11.74□□□□□ -0.53
RUNX3-204ENST00000479341 CDK2AP2O75956 126 aa11.74□□□□□ -0.53
RUNX3-204ENST00000479341 SLC25A34Q6PIV7 304 aa11.74□□□□□ -0.53
RUNX3-204ENST00000479341 ARL17AQ8IVW1 177 aa11.74□□□□□ -0.53
RUNX3-204ENST00000479341 TMEM238C9JI98 176 aa11.73□□□□□ -0.53
RUNX3-204ENST00000479341 SERTAD4-AS1Q5TG53 156 aa11.73□□□□□ -0.53
RUNX3-204ENST00000479341 SOSTDC1Q6X4U4 206 aa11.72□□□□□ -0.53
RUNX3-204ENST00000479341 SPANXDQ9BXN6 97 aa11.72□□□□□ -0.53
RUNX3-204ENST00000479341 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
RUNX3-204ENST00000479341 EIF4EBP3O60516 100 aaPredicted RBP11.71□□□□□ -0.53
RUNX3-204ENST00000479341 FAM19A5Q7Z5A7 132 aaPredicted RBP11.71□□□□□ -0.53
RUNX3-204ENST00000479341 Q8NDZ9 215 aa11.71□□□□□ -0.53
RUNX3-204ENST00000479341 HSPG2P98160 4391 aa11.7□□□□□ -0.54
RUNX3-204ENST00000479341 Q6ZVH6 145 aa11.7□□□□□ -0.54
RUNX3-204ENST00000479341 LINC00308Q8TCZ7 52 aa11.7□□□□□ -0.54
RUNX3-204ENST00000479341 SPANXB1Q9NS25 103 aaPredicted RBP11.7□□□□□ -0.54
RUNX3-204ENST00000479341 IGLV5-37A0A075B6J1 123 aa11.69□□□□□ -0.54
RUNX3-204ENST00000479341 VPREB1P12018 145 aa11.69□□□□□ -0.54
RUNX3-204ENST00000479341 HIGD1BQ9P298 99 aa11.69□□□□□ -0.54
RUNX3-204ENST00000479341 APOBP04114 4563 aaKnown RBP11.69□□□□□ -0.54
RUNX3-204ENST00000479341 NPC2P61916 151 aa11.68□□□□□ -0.54
RUNX3-204ENST00000479341 RPL24P83731 157 aaKnown RBP11.68□□□□□ -0.54
RUNX3-204ENST00000479341 C2orf91Q6ZV80 131 aa11.68□□□□□ -0.54
RUNX3-204ENST00000479341 IFITM1P13164 125 aa11.67□□□□□ -0.54
RUNX3-204ENST00000479341 C12orf57Q99622 126 aa11.67□□□□□ -0.54
RUNX3-204ENST00000479341 MIEN1Q9BRT3 115 aa11.67□□□□□ -0.54
RUNX3-204ENST00000479341 PPDPFQ9H3Y8 114 aa11.67□□□□□ -0.54
RUNX3-204ENST00000479341 C22orf24Q9Y442 160 aa11.67□□□□□ -0.54
RUNX3-204ENST00000479341 UQCR10Q9UDW1 63 aa11.66□□□□□ -0.54
RUNX3-204ENST00000479341 M0QXV9 152 aa11.65□□□□□ -0.54
RUNX3-204ENST00000479341 SRSF9Q13242 221 aaKnown RBP eCLIP11.65□□□□□ -0.54
RUNX3-204ENST00000479341 PHF5AQ7RTV0 110 aaKnown RBP11.65□□□□□ -0.54
RUNX3-204ENST00000479341 MUSTN1Q8IVN3 82 aa11.65□□□□□ -0.54
RUNX3-204ENST00000479341 LINC00518Q8N0U6 118 aa11.65□□□□□ -0.54
RUNX3-204ENST00000479341 KRTAP4-5Q9BYR2 181 aa11.65□□□□□ -0.54
RUNX3-204ENST00000479341 NDUFC2O95298 119 aa11.64□□□□□ -0.55
RUNX3-204ENST00000479341 PRO1933Q9H354 126 aa11.64□□□□□ -0.55
RUNX3-204ENST00000479341 PRR3P79522 188 aaKnown RBP11.63□□□□□ -0.55
RUNX3-204ENST00000479341 NKAPP1Q8N9T2 125 aa11.63□□□□□ -0.55
RUNX3-204ENST00000479341 COPS9Q8WXC6 57 aa11.63□□□□□ -0.55
RUNX3-204ENST00000479341 LBHQ53QV2 105 aaPredicted RBP11.62□□□□□ -0.55
RUNX3-204ENST00000479341 MRPL55Q7Z7F7 128 aaKnown RBP11.62□□□□□ -0.55
RUNX3-204ENST00000479341 SMR3BP02814 79 aaPredicted RBP11.61□□□□□ -0.55
RUNX3-204ENST00000479341 C7orf33Q8WU49 177 aa11.61□□□□□ -0.55
RUNX3-204ENST00000479341 LINC00167Q96N53 147 aa11.61□□□□□ -0.55
RUNX3-204ENST00000479341 HIST1H4GQ99525 98 aa11.61□□□□□ -0.55
RUNX3-204ENST00000479341 M0R378 163 aa11.6□□□□□ -0.55
RUNX3-204ENST00000479341 TRBV10-2A0A0K0K1G8 114 aa11.59□□□□□ -0.55
RUNX3-204ENST00000479341 KRTAP11-1Q8IUC1 163 aa11.59□□□□□ -0.55
RUNX3-204ENST00000479341 GAGE10A6NGK3 116 aa11.58□□□□□ -0.56
RUNX3-204ENST00000479341 NCR3O14931 201 aa11.58□□□□□ -0.56
RUNX3-204ENST00000479341 TAL2Q16559 108 aa11.58□□□□□ -0.56
RUNX3-204ENST00000479341 IGKV2-28A0A075B6P5 120 aa11.57□□□□□ -0.56
RUNX3-204ENST00000479341 IGKV2D-28P01615 120 aa11.57□□□□□ -0.56
RUNX3-204ENST00000479341 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
RUNX3-204ENST00000479341 RPL37AP8A6NKH3 93 aa11.55□□□□□ -0.56
RUNX3-204ENST00000479341 HNRNPA3P51991 378 aaKnown RBP11.55□□□□□ -0.56
RUNX3-204ENST00000479341 UBE2BP63146 152 aa11.55□□□□□ -0.56
RUNX3-204ENST00000479341 IGLV1-50A0A075B6I6 118 aa11.54□□□□□ -0.56
RUNX3-204ENST00000479341 A4D1N5 150 aa11.54□□□□□ -0.56
RUNX3-204ENST00000479341 HSD52Q0P140 79 aa11.53□□□□□ -0.56
RUNX3-204ENST00000479341 CEND1Q8N111 149 aa11.53□□□□□ -0.56
RUNX3-204ENST00000479341 TSTD3H0UI37 97 aa11.52□□□□□ -0.57
RUNX3-204ENST00000479341 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.57
RUNX3-204ENST00000479341 TRBV10-3A0A0K0K1G6 114 aa11.51□□□□□ -0.57
RUNX3-204ENST00000479341 IGLV6-57P01721 117 aa11.51□□□□□ -0.57
RUNX3-204ENST00000479341 Q8N1X5 172 aa11.51□□□□□ -0.57
RUNX3-204ENST00000479341 LINC00337Q8N6G1 96 aa11.51□□□□□ -0.57
RUNX3-204ENST00000479341 DDTP30046 118 aa11.5□□□□□ -0.57
RUNX3-204ENST00000479341 RPL37AP61513 92 aaKnown RBP11.5□□□□□ -0.57
RUNX3-204ENST00000479341 FAM229AH3BQW9 127 aa11.49□□□□□ -0.57
RUNX3-204ENST00000479341 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
RUNX3-204ENST00000479341 KCNQ1DNQ9H478 68 aa11.49□□□□□ -0.57
RUNX3-204ENST00000479341 KRTAP10-4P60372 401 aaPredicted RBP11.48□□□□□ -0.57
RUNX3-204ENST00000479341 FXYD2P54710 66 aa11.47□□□□□ -0.57
RUNX3-204ENST00000479341 OR13C6PQ8NH95 151 aa11.47□□□□□ -0.57
RUNX3-204ENST00000479341 TMEM126AQ9H061 195 aa11.47□□□□□ -0.57
RUNX3-204ENST00000479341 Q5VSD8 79 aa11.46□□□□□ -0.57
RUNX3-204ENST00000479341 FAT1Q14517 4588 aa11.45□□□□□ -0.58
RUNX3-204ENST00000479341 TRAV13-2A0A0B4J235 113 aa11.45□□□□□ -0.58
RUNX3-204ENST00000479341 PRYO14603 147 aa11.45□□□□□ -0.58
RUNX3-204ENST00000479341 PLA2G1BP04054 148 aaKnown RBP11.45□□□□□ -0.58
RUNX3-204ENST00000479341 CTAG1AP78358 180 aa11.45□□□□□ -0.58
RUNX3-204ENST00000479341 C1orf137Q5JT78 98 aa11.45□□□□□ -0.58
RUNX3-204ENST00000479341 A6NDN8 102 aa11.44□□□□□ -0.58
RUNX3-204ENST00000479341 CFC1BP0CG36 223 aa11.44□□□□□ -0.58
RUNX3-204ENST00000479341 CFC1P0CG37 223 aa11.44□□□□□ -0.58
RUNX3-204ENST00000479341 SPRR1AP35321 89 aa11.44□□□□□ -0.58
RUNX3-204ENST00000479341 REG3GQ6UW15 175 aa11.44□□□□□ -0.58
RUNX3-204ENST00000479341 TMEM238LA0A1B0GVL6 79 aa11.43□□□□□ -0.58
RUNX3-204ENST00000479341 A6NJY4 79 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms