RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 LRP1BQ9NZR2 4599 aa8.66□□□□□ -1.02
SMARCAL1-211ENST00000479008 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
SMARCAL1-211ENST00000479008 SRSF9Q13242 221 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMARCAL1-211ENST00000479008 SOSTDC1Q6X4U4 206 aa8.66□□□□□ -1.02
SMARCAL1-211ENST00000479008 Q6ZSA8 131 aa8.66□□□□□ -1.02
SMARCAL1-211ENST00000479008 HIGD1BQ9P298 99 aa8.66□□□□□ -1.02
SMARCAL1-211ENST00000479008 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
SMARCAL1-211ENST00000479008 A0A087WYN8 130 aa8.64□□□□□ -1.03
SMARCAL1-211ENST00000479008 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
SMARCAL1-211ENST00000479008 TSTD3H0UI37 97 aa8.64□□□□□ -1.03
SMARCAL1-211ENST00000479008 EIF4EBP3O60516 100 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-211ENST00000479008 Q6ZVH6 145 aa8.64□□□□□ -1.03
SMARCAL1-211ENST00000479008 FAM19A5Q7Z5A7 132 aaPredicted RBP8.64□□□□□ -1.03
SMARCAL1-211ENST00000479008 IFITM1P13164 125 aa8.63□□□□□ -1.03
SMARCAL1-211ENST00000479008 HNRNPA3P51991 378 aaKnown RBP8.63□□□□□ -1.03
SMARCAL1-211ENST00000479008 HAMPP81172 84 aa8.63□□□□□ -1.03
SMARCAL1-211ENST00000479008 SERTAD4-AS1Q5TG53 156 aa8.63□□□□□ -1.03
SMARCAL1-211ENST00000479008 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
SMARCAL1-211ENST00000479008 HIST1H4GQ99525 98 aa8.63□□□□□ -1.03
SMARCAL1-211ENST00000479008 PLA2G2DQ9UNK4 145 aa8.63□□□□□ -1.03
SMARCAL1-211ENST00000479008 LOC107984156A0A0G2JMH3 177 aa8.62□□□□□ -1.03
SMARCAL1-211ENST00000479008 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
SMARCAL1-211ENST00000479008 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
SMARCAL1-211ENST00000479008 ARL17AQ8IVW1 177 aa8.62□□□□□ -1.03
SMARCAL1-211ENST00000479008 Q8NDZ9 215 aa8.62□□□□□ -1.03
SMARCAL1-211ENST00000479008 COPS9Q8WXC6 57 aa8.62□□□□□ -1.03
SMARCAL1-211ENST00000479008 VPREB1P12018 145 aa8.61□□□□□ -1.03
SMARCAL1-211ENST00000479008 RPL24P83731 157 aaKnown RBP8.61□□□□□ -1.03
SMARCAL1-211ENST00000479008 CIRBP-AS1Q8TBR5 109 aa8.61□□□□□ -1.03
SMARCAL1-211ENST00000479008 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
SMARCAL1-211ENST00000479008 NKAPP1Q8N9T2 125 aa8.6□□□□□ -1.03
SMARCAL1-211ENST00000479008 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
SMARCAL1-211ENST00000479008 IGLV5-37A0A075B6J1 123 aa8.59□□□□□ -1.03
SMARCAL1-211ENST00000479008 M0QXV9 152 aa8.59□□□□□ -1.03
SMARCAL1-211ENST00000479008 NCR3O14931 201 aa8.59□□□□□ -1.03
SMARCAL1-211ENST00000479008 TAL2Q16559 108 aa8.59□□□□□ -1.03
SMARCAL1-211ENST00000479008 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
SMARCAL1-211ENST00000479008 C22orf24Q9Y442 160 aa8.59□□□□□ -1.03
SMARCAL1-211ENST00000479008 APOBP04114 4563 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-211ENST00000479008 EPM2AB3EWF7 344 aa8.58□□□□□ -1.04
SMARCAL1-211ENST00000479008 NDUFC2O95298 119 aa8.58□□□□□ -1.04
SMARCAL1-211ENST00000479008 XGP55808 180 aa8.58□□□□□ -1.04
SMARCAL1-211ENST00000479008 PRR3P79522 188 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-211ENST00000479008 HSD52Q0P140 79 aa8.58□□□□□ -1.04
SMARCAL1-211ENST00000479008 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
SMARCAL1-211ENST00000479008 CEND1Q8N111 149 aa8.57□□□□□ -1.04
SMARCAL1-211ENST00000479008 A4D1N5 150 aa8.56□□□□□ -1.04
SMARCAL1-211ENST00000479008 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
SMARCAL1-211ENST00000479008 GAGE10A6NGK3 116 aa8.55□□□□□ -1.04
SMARCAL1-211ENST00000479008 M0R378 163 aa8.55□□□□□ -1.04
SMARCAL1-211ENST00000479008 CTAG1AP78358 180 aa8.55□□□□□ -1.04
SMARCAL1-211ENST00000479008 LBHQ53QV2 105 aaPredicted RBP8.55□□□□□ -1.04
SMARCAL1-211ENST00000479008 C7orf33Q8WU49 177 aa8.55□□□□□ -1.04
SMARCAL1-211ENST00000479008 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
SMARCAL1-211ENST00000479008 TRBV10-2A0A0K0K1G8 114 aa8.54□□□□□ -1.04
SMARCAL1-211ENST00000479008 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
SMARCAL1-211ENST00000479008 LINC00167Q96N53 147 aa8.54□□□□□ -1.04
SMARCAL1-211ENST00000479008 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
SMARCAL1-211ENST00000479008 DDTP30046 118 aa8.53□□□□□ -1.04
SMARCAL1-211ENST00000479008 FXYD2P54710 66 aa8.53□□□□□ -1.04
SMARCAL1-211ENST00000479008 UBE2BP63146 152 aa8.53□□□□□ -1.04
SMARCAL1-211ENST00000479008 RPL37AP8A6NKH3 93 aa8.52□□□□□ -1.05
SMARCAL1-211ENST00000479008 TMEM238LA0A1B0GVL6 79 aa8.51□□□□□ -1.05
SMARCAL1-211ENST00000479008 A6NJY4 79 aa8.51□□□□□ -1.05
SMARCAL1-211ENST00000479008 S100A7L2Q5SY68 101 aa8.51□□□□□ -1.05
SMARCAL1-211ENST00000479008 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
SMARCAL1-211ENST00000479008 OR13C6PQ8NH95 151 aa8.51□□□□□ -1.05
SMARCAL1-211ENST00000479008 TRBV10-3A0A0K0K1G6 114 aa8.5□□□□□ -1.05
SMARCAL1-211ENST00000479008 SMR3BP02814 79 aaPredicted RBP8.5□□□□□ -1.05
SMARCAL1-211ENST00000479008 HINT1P49773 126 aaPredicted RBP8.5□□□□□ -1.05
SMARCAL1-211ENST00000479008 KRTAP11-1Q8IUC1 163 aa8.5□□□□□ -1.05
SMARCAL1-211ENST00000479008 IGLV1-50A0A075B6I6 118 aa8.49□□□□□ -1.05
SMARCAL1-211ENST00000479008 A6NDN8 102 aa8.49□□□□□ -1.05
SMARCAL1-211ENST00000479008 M0R143 59 aa8.49□□□□□ -1.05
SMARCAL1-211ENST00000479008 BVES-AS1Q5T3Y7 98 aa8.49□□□□□ -1.05
SMARCAL1-211ENST00000479008 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
SMARCAL1-211ENST00000479008 PCP4L1A6NKN8 68 aa8.48□□□□□ -1.05
SMARCAL1-211ENST00000479008 IGLV6-57P01721 117 aa8.48□□□□□ -1.05
SMARCAL1-211ENST00000479008 CFC1BP0CG36 223 aa8.48□□□□□ -1.05
SMARCAL1-211ENST00000479008 CFC1P0CG37 223 aa8.48□□□□□ -1.05
SMARCAL1-211ENST00000479008 RAB37Q96AX2 223 aa8.48□□□□□ -1.05
SMARCAL1-211ENST00000479008 NHP2Q9NX24 153 aaKnown RBP8.48□□□□□ -1.05
SMARCAL1-211ENST00000479008 A0A0B4J2C4 111 aa8.47□□□□□ -1.05
SMARCAL1-211ENST00000479008 LINC00528Q8N1L1 170 aa8.47□□□□□ -1.05
SMARCAL1-211ENST00000479008 TMEM126AQ9H061 195 aa8.47□□□□□ -1.05
SMARCAL1-211ENST00000479008 HSPG2P98160 4391 aa8.46□□□□□ -1.05
SMARCAL1-211ENST00000479008 PSORS1C2Q9UIG4 136 aa8.46□□□□□ -1.06
SMARCAL1-211ENST00000479008 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
SMARCAL1-211ENST00000479008 PRYO14603 147 aa8.45□□□□□ -1.06
SMARCAL1-211ENST00000479008 RPL13AP40429 203 aaKnown RBP8.45□□□□□ -1.06
SMARCAL1-211ENST00000479008 RYR1P21817 5038 aa8.45□□□□□ -1.06
SMARCAL1-211ENST00000479008 K7ERJ3 54 aa8.44□□□□□ -1.06
SMARCAL1-211ENST00000479008 BATFQ16520 125 aa8.44□□□□□ -1.06
SMARCAL1-211ENST00000479008 REG3GQ6UW15 175 aa8.44□□□□□ -1.06
SMARCAL1-211ENST00000479008 KCNQ1DNQ9H478 68 aa8.44□□□□□ -1.06
SMARCAL1-211ENST00000479008 BIRC6Q9NR09 4857 aa8.44□□□□□ -1.06
SMARCAL1-211ENST00000479008 C1orf137Q5JT78 98 aa8.43□□□□□ -1.06
SMARCAL1-211ENST00000479008 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
SMARCAL1-211ENST00000479008 CBY1Q9Y3M2 126 aa8.43□□□□□ -1.06
SMARCAL1-211ENST00000479008 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 299.7 ms