RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KRTAP10-11P60412 298 aa7.3□□□□□ -1.24
VPS52-217ENST00000478934 CYSRT1A8MQ03 144 aa7.3□□□□□ -1.24
VPS52-217ENST00000478934 SPAG11BQ08648 103 aa7.3□□□□□ -1.24
VPS52-217ENST00000478934 Q8N814 137 aa7.3□□□□□ -1.24
VPS52-217ENST00000478934 CMYA5Q8N3K9 4069 aa7.29□□□□□ -1.24
VPS52-217ENST00000478934 LELP1Q5T871 98 aa7.29□□□□□ -1.24
VPS52-217ENST00000478934 LYPD5Q6UWN5 251 aa7.29□□□□□ -1.24
VPS52-217ENST00000478934 S100A7L2Q5SY68 101 aa7.29□□□□□ -1.24
VPS52-217ENST00000478934 WFDC10BQ8IUB3 73 aa7.29□□□□□ -1.24
VPS52-217ENST00000478934 IMUPQ9GZP8 106 aa7.29□□□□□ -1.24
VPS52-217ENST00000478934 XAGE1AQ9HD64 81 aa7.29□□□□□ -1.24
VPS52-217ENST00000478934 RPL18AQ02543 176 aaKnown RBP7.28□□□□□ -1.24
VPS52-217ENST00000478934 OBSCN-AS1Q96MR7 158 aa7.28□□□□□ -1.24
VPS52-217ENST00000478934 C9orf153Q5TBE3 101 aa7.27□□□□□ -1.25
VPS52-217ENST00000478934 LINC01561Q8N1V8 128 aa7.27□□□□□ -1.25
VPS52-217ENST00000478934 HIGD2BQ4VC39 106 aa7.27□□□□□ -1.25
VPS52-217ENST00000478934 TMEM126AQ9H061 195 aa7.27□□□□□ -1.25
VPS52-217ENST00000478934 Q6ZTC4 211 aa7.26□□□□□ -1.25
VPS52-217ENST00000478934 HIST1H4AP62805 103 aaKnown RBP7.26□□□□□ -1.25
VPS52-217ENST00000478934 COX17Q14061 63 aa7.26□□□□□ -1.25
VPS52-217ENST00000478934 CYSTM1Q9H1C7 97 aa7.26□□□□□ -1.25
VPS52-217ENST00000478934 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
VPS52-217ENST00000478934 KPRPQ5T749 579 aaPredicted RBP7.25□□□□□ -1.25
VPS52-217ENST00000478934 C6orf48Q9UBA6 75 aa7.25□□□□□ -1.25
VPS52-217ENST00000478934 M0R2N4 97 aa7.24□□□□□ -1.25
VPS52-217ENST00000478934 NDUFC2O95298 119 aa7.24□□□□□ -1.25
VPS52-217ENST00000478934 C3orf22Q8N5N4 141 aa7.24□□□□□ -1.25
VPS52-217ENST00000478934 NBEAL1Q6ZS30 2694 aa7.24□□□□□ -1.25
VPS52-217ENST00000478934 CCKP06307 115 aa7.24□□□□□ -1.25
VPS52-217ENST00000478934 COL6A5A8TX70 2615 aa7.23□□□□□ -1.25
VPS52-217ENST00000478934 A0A1B0GX51 115 aa7.23□□□□□ -1.25
VPS52-217ENST00000478934 C2orf48Q96LS8 159 aa7.22□□□□□ -1.25
VPS52-217ENST00000478934 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
VPS52-217ENST00000478934 TMEM256-PLSCR3K7ERE1 68 aa7.22□□□□□ -1.25
VPS52-217ENST00000478934 FAM19A1Q7Z5A9 133 aa7.22□□□□□ -1.25
VPS52-217ENST00000478934 LINC00167Q96N53 147 aa7.22□□□□□ -1.25
VPS52-217ENST00000478934 A0A0J9YWU9 116 aa7.21□□□□□ -1.25
VPS52-217ENST00000478934 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.25
VPS52-217ENST00000478934 PRB2P02812 416 aaPredicted RBP7.21□□□□□ -1.25
VPS52-217ENST00000478934 ESRGQ1W209 222 aa7.21□□□□□ -1.25
VPS52-217ENST00000478934 LINC00575Q6W349 94 aa7.21□□□□□ -1.25
VPS52-217ENST00000478934 LAMTOR3Q9UHA4 124 aa7.21□□□□□ -1.25
VPS52-217ENST00000478934 UQCRQO14949 82 aa7.21□□□□□ -1.26
VPS52-217ENST00000478934 WIPF1O43516 503 aa7.21□□□□□ -1.26
VPS52-217ENST00000478934 Q6JHZ5 121 aa7.21□□□□□ -1.26
VPS52-217ENST00000478934 KRTAP24-1Q3LI83 254 aa7.2□□□□□ -1.26
VPS52-217ENST00000478934 Q6ZQY7 126 aa7.2□□□□□ -1.26
VPS52-217ENST00000478934 COX7CP15954 63 aa7.2□□□□□ -1.26
VPS52-217ENST00000478934 TRAV23DV6A0A075B6W5 121 aa7.19□□□□□ -1.26
VPS52-217ENST00000478934 JMJD7-PLA2G4BH0Y9G9 81 aa7.19□□□□□ -1.26
VPS52-217ENST00000478934 KRTAP26-1Q6PEX3 210 aa7.19□□□□□ -1.26
VPS52-217ENST00000478934 USP17L23D6RBM5 183 aa7.18□□□□□ -1.26
VPS52-217ENST00000478934 IGLV6-57P01721 117 aa7.18□□□□□ -1.26
VPS52-217ENST00000478934 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
VPS52-217ENST00000478934 Q6ZRU5 148 aa7.18□□□□□ -1.26
VPS52-217ENST00000478934 CAMK2N2Q96S95 79 aa7.18□□□□□ -1.26
VPS52-217ENST00000478934 ZNF561-AS1K7EIQ3 104 aa7.17□□□□□ -1.26
VPS52-217ENST00000478934 ATOX1O00244 68 aa7.17□□□□□ -1.26
VPS52-217ENST00000478934 C15orf56Q8N910 161 aa7.17□□□□□ -1.26
VPS52-217ENST00000478934 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
VPS52-217ENST00000478934 BAHCC1Q9P281 2608 aa7.16□□□□□ -1.26
VPS52-217ENST00000478934 DNAH3Q8TD57 4116 aa7.16□□□□□ -1.26
VPS52-217ENST00000478934 IGKV2D-24A0A075B6R9 120 aa7.15□□□□□ -1.26
VPS52-217ENST00000478934 Q6ZQT0 140 aa7.15□□□□□ -1.26
VPS52-217ENST00000478934 DEFB131BA0A096LNP1 70 aa7.14□□□□□ -1.27
VPS52-217ENST00000478934 GVQW2A0A096LPI5 108 aaPredicted RBP7.14□□□□□ -1.27
VPS52-217ENST00000478934 HAMPP81172 84 aa7.14□□□□□ -1.27
VPS52-217ENST00000478934 SCXQ7RTU7 201 aa7.14□□□□□ -1.27
VPS52-217ENST00000478934 LYSTQ99698 3801 aa7.14□□□□□ -1.27
VPS52-217ENST00000478934 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
VPS52-217ENST00000478934 ZNF73O43830 326 aaPredicted RBP7.13□□□□□ -1.27
VPS52-217ENST00000478934 VPREB1P12018 145 aa7.13□□□□□ -1.27
VPS52-217ENST00000478934 Q6ZRP5 223 aa7.13□□□□□ -1.27
VPS52-217ENST00000478934 DIRC1Q969H9 104 aa7.13□□□□□ -1.27
VPS52-217ENST00000478934 GHRHP01286 108 aa7.13□□□□□ -1.27
VPS52-217ENST00000478934 C11orf45Q8TAV5 145 aa7.13□□□□□ -1.27
VPS52-217ENST00000478934 UPK3BQ9BT76 320 aa7.13□□□□□ -1.27
VPS52-217ENST00000478934 MGAM2Q2M2H8 2515 aa7.12□□□□□ -1.27
VPS52-217ENST00000478934 CRYGAP11844 174 aa7.12□□□□□ -1.27
VPS52-217ENST00000478934 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
VPS52-217ENST00000478934 EGFEM1PQ0D2K5 195 aa7.12□□□□□ -1.27
VPS52-217ENST00000478934 CASC10Q5T4H9 136 aa7.12□□□□□ -1.27
VPS52-217ENST00000478934 DSCR8Q96T75 97 aa7.12□□□□□ -1.27
VPS52-217ENST00000478934 MRAPQ8TCY5 172 aa7.11□□□□□ -1.27
VPS52-217ENST00000478934 C1orf43Q9BWL3 253 aa7.11□□□□□ -1.27
VPS52-217ENST00000478934 CSMD3Q7Z407 3707 aa7.11□□□□□ -1.27
VPS52-217ENST00000478934 H3BNG1 76 aa7.1□□□□□ -1.27
VPS52-217ENST00000478934 COX7BP24311 80 aa7.1□□□□□ -1.27
VPS52-217ENST00000478934 Q6ZVQ6 151 aa7.1□□□□□ -1.27
VPS52-217ENST00000478934 LINC01547P58512 204 aaPredicted RBP7.09□□□□□ -1.27
VPS52-217ENST00000478934 HUWE1Q7Z6Z7 4374 aaKnown RBP7.09□□□□□ -1.27
VPS52-217ENST00000478934 NDUFC2-KCTD14E9PQ53 114 aa7.09□□□□□ -1.27
VPS52-217ENST00000478934 MUC7Q8TAX7 377 aa7.09□□□□□ -1.27
VPS52-217ENST00000478934 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
VPS52-217ENST00000478934 ELOF1P60002 83 aaKnown RBP7.08□□□□□ -1.28
VPS52-217ENST00000478934 LINC01556Q5JQF7 62 aa7.08□□□□□ -1.28
VPS52-217ENST00000478934 DEFB105AQ8NG35 78 aa7.08□□□□□ -1.28
VPS52-217ENST00000478934 DNAH10Q8IVF4 4471 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 TENM2Q9NT68 2774 aa7.07□□□□□ -1.28
VPS52-217ENST00000478934 COL7A1Q02388 2944 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms