RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 PYY3Q5JQD4 70 aa9.2□□□□□ -0.94
USP11-207ENST00000478596 ERG28Q9UKR5 140 aa9.2□□□□□ -0.94
USP11-207ENST00000478596 LINC00158P58513 81 aa9.19□□□□□ -0.94
USP11-207ENST00000478596 S100A12P80511 92 aa9.19□□□□□ -0.94
USP11-207ENST00000478596 SPATA45Q537H7 98 aa9.19□□□□□ -0.94
USP11-207ENST00000478596 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
USP11-207ENST00000478596 A0A0U1RRA0 63 aa9.18□□□□□ -0.94
USP11-207ENST00000478596 GAGE2EQ4V326 116 aa9.18□□□□□ -0.94
USP11-207ENST00000478596 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
USP11-207ENST00000478596 GAGE2DQ9UEU5 116 aa9.18□□□□□ -0.94
USP11-207ENST00000478596 LINC00587B1AMM8 73 aa9.17□□□□□ -0.94
USP11-207ENST00000478596 NDUFC2-KCTD14E9PQ53 114 aa9.17□□□□□ -0.94
USP11-207ENST00000478596 TTTY13Q9BZ97 58 aa9.17□□□□□ -0.94
USP11-207ENST00000478596 A0A096LNI7 61 aa9.16□□□□□ -0.94
USP11-207ENST00000478596 CIRBPQ14011 172 aaKnown RBP9.16□□□□□ -0.94
USP11-207ENST00000478596 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
USP11-207ENST00000478596 A0A0U1RQV1 116 aa9.15□□□□□ -0.94
USP11-207ENST00000478596 CHTF8P0CG12 524 aa9.15□□□□□ -0.94
USP11-207ENST00000478596 SMIM6P0DI80 62 aa9.15□□□□□ -0.94
USP11-207ENST00000478596 SMIM13P0DJ93 91 aa9.15□□□□□ -0.94
USP11-207ENST00000478596 PCP2Q8IVA1 136 aa9.15□□□□□ -0.94
USP11-207ENST00000478596 LINC00474Q9P2X8 69 aa9.15□□□□□ -0.94
USP11-207ENST00000478596 LOC105371267A0A1B0GV96 52 aa9.14□□□□□ -0.95
USP11-207ENST00000478596 PTTG1IPP53801 180 aa9.14□□□□□ -0.95
USP11-207ENST00000478596 COX17Q14061 63 aa9.14□□□□□ -0.95
USP11-207ENST00000478596 MIEN1Q9BRT3 115 aa9.14□□□□□ -0.95
USP11-207ENST00000478596 A0A0J9YXY3 114 aa9.13□□□□□ -0.95
USP11-207ENST00000478596 SDIM1Q6ZPB5 146 aa9.13□□□□□ -0.95
USP11-207ENST00000478596 Q6ZRP5 223 aa9.13□□□□□ -0.95
USP11-207ENST00000478596 TMEM238C9JI98 176 aa9.12□□□□□ -0.95
USP11-207ENST00000478596 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
USP11-207ENST00000478596 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
USP11-207ENST00000478596 XAGE1AQ9HD64 81 aa9.12□□□□□ -0.95
USP11-207ENST00000478596 MIR7-3HGQ8N6C7 128 aa9.11□□□□□ -0.95
USP11-207ENST00000478596 DAND5Q8N907 189 aa9.11□□□□□ -0.95
USP11-207ENST00000478596 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
USP11-207ENST00000478596 COX8AP10176 69 aa9.1□□□□□ -0.95
USP11-207ENST00000478596 NPC2P61916 151 aa9.1□□□□□ -0.95
USP11-207ENST00000478596 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
USP11-207ENST00000478596 FAM19A5Q7Z5A7 132 aaPredicted RBP9.1□□□□□ -0.95
USP11-207ENST00000478596 SPACA4Q8TDM5 124 aa9.1□□□□□ -0.95
USP11-207ENST00000478596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.1□□□□□ -0.95
USP11-207ENST00000478596 SND1-IT1Q9HBX3 110 aa9.09□□□□□ -0.95
USP11-207ENST00000478596 TP73-AS1Q9UF72 201 aa9.09□□□□□ -0.95
USP11-207ENST00000478596 TIMM17BO60830 172 aa9.08□□□□□ -0.96
USP11-207ENST00000478596 KRTAP10-8P60410 259 aa9.07□□□□□ -0.96
USP11-207ENST00000478596 NKAPP1Q8N9T2 125 aa9.07□□□□□ -0.96
USP11-207ENST00000478596 PANO1I0J062 215 aa9.06□□□□□ -0.96
USP11-207ENST00000478596 SRSF9Q13242 221 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP11-207ENST00000478596 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
USP11-207ENST00000478596 BOD1L2Q8IYS8 172 aa9.06□□□□□ -0.96
USP11-207ENST00000478596 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
USP11-207ENST00000478596 C12orf57Q99622 126 aa9.06□□□□□ -0.96
USP11-207ENST00000478596 A0A087WYN8 130 aa9.05□□□□□ -0.96
USP11-207ENST00000478596 FAM168BA1KXE4 195 aa9.04□□□□□ -0.96
USP11-207ENST00000478596 M0QXV9 152 aa9.04□□□□□ -0.96
USP11-207ENST00000478596 RPL24P83731 157 aaKnown RBP9.04□□□□□ -0.96
USP11-207ENST00000478596 DLEU1O43261 78 aa9.03□□□□□ -0.96
USP11-207ENST00000478596 ADAMTSL4-AS1Q5T5F5 129 aa9.03□□□□□ -0.96
USP11-207ENST00000478596 HIST1H4GQ99525 98 aa9.03□□□□□ -0.96
USP11-207ENST00000478596 SPANXDQ9BXN6 97 aa9.03□□□□□ -0.96
USP11-207ENST00000478596 PRO1933Q9H354 126 aa9.03□□□□□ -0.96
USP11-207ENST00000478596 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
USP11-207ENST00000478596 UQCR10Q9UDW1 63 aa9.03□□□□□ -0.96
USP11-207ENST00000478596 NCR3O14931 201 aa9.02□□□□□ -0.97
USP11-207ENST00000478596 UBE2BP63146 152 aa9.02□□□□□ -0.97
USP11-207ENST00000478596 LITAFQ99732 161 aa9.02□□□□□ -0.97
USP11-207ENST00000478596 Q6ZVH6 145 aa9.01□□□□□ -0.97
USP11-207ENST00000478596 LINC00308Q8TCZ7 52 aa9.01□□□□□ -0.97
USP11-207ENST00000478596 C7orf33Q8WU49 177 aa9.01□□□□□ -0.97
USP11-207ENST00000478596 A0A1W2PNN7 141 aa9□□□□□ -0.97
USP11-207ENST00000478596 TSTD3H0UI37 97 aa9□□□□□ -0.97
USP11-207ENST00000478596 SPANXB1Q9NS25 103 aaPredicted RBP9□□□□□ -0.97
USP11-207ENST00000478596 PLAC8Q9NZF1 115 aa9□□□□□ -0.97
USP11-207ENST00000478596 FSIP2Q5CZC0 6907 aa8.99□□□□□ -0.97
USP11-207ENST00000478596 GAGE10A6NGK3 116 aa8.99□□□□□ -0.97
USP11-207ENST00000478596 IFITM1P13164 125 aa8.99□□□□□ -0.97
USP11-207ENST00000478596 LBHQ53QV2 105 aaPredicted RBP8.98□□□□□ -0.97
USP11-207ENST00000478596 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
USP11-207ENST00000478596 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
USP11-207ENST00000478596 VPREB1P12018 145 aa8.97□□□□□ -0.97
USP11-207ENST00000478596 SOSTDC1Q6X4U4 206 aa8.97□□□□□ -0.97
USP11-207ENST00000478596 C2orf91Q6ZV80 131 aa8.97□□□□□ -0.97
USP11-207ENST00000478596 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
USP11-207ENST00000478596 MUSTN1Q8IVN3 82 aa8.97□□□□□ -0.97
USP11-207ENST00000478596 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
USP11-207ENST00000478596 S100A7L2Q5SY68 101 aa8.96□□□□□ -0.98
USP11-207ENST00000478596 LINC00518Q8N0U6 118 aa8.95□□□□□ -0.98
USP11-207ENST00000478596 CRCT1Q9UGL9 99 aa8.95□□□□□ -0.98
USP11-207ENST00000478596 IGLV5-37A0A075B6J1 123 aa8.94□□□□□ -0.98
USP11-207ENST00000478596 IGKV2-28A0A075B6P5 120 aa8.94□□□□□ -0.98
USP11-207ENST00000478596 M0R378 163 aa8.94□□□□□ -0.98
USP11-207ENST00000478596 NDUFC2O95298 119 aa8.94□□□□□ -0.98
USP11-207ENST00000478596 IGKV2D-28P01615 120 aa8.94□□□□□ -0.98
USP11-207ENST00000478596 HSD52Q0P140 79 aa8.94□□□□□ -0.98
USP11-207ENST00000478596 OR13C6PQ8NH95 151 aa8.94□□□□□ -0.98
USP11-207ENST00000478596 TMEM238LA0A1B0GVL6 79 aa8.93□□□□□ -0.98
USP11-207ENST00000478596 A6NJY4 79 aa8.93□□□□□ -0.98
USP11-207ENST00000478596 RPL37AP8A6NKH3 93 aa8.93□□□□□ -0.98
USP11-207ENST00000478596 EIF4EBP3O60516 100 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms