RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 EXOC3-AS1Q8N2X6 119 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 FER1L6-AS1Q8NA97 138 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 ATP6V0E2Q8NHE4 81 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 MRAP2Q96G30 205 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 LINC01600Q96MT4 127 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 VPS25Q9BRG1 176 aa1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 RNASE7Q9H1E1 156 aaKnown RBP1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 NXT2Q9NPJ8 142 aaKnown RBP1.99□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRAV4A0A0B4J268 109 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRAV21A0A0B4J279 112 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 A0A1B0GV72 72 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 TMEM238C9JI98 176 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 F5H768 121 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 IGHV3-53P01767 116 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 DEFB130BP0DP73 79 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 DEFB130AP0DP74 79 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 MGST1P10620 155 aaKnown RBP1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 FGF6P10767 208 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 FABP2P12104 132 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 HRES1P13985 223 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 HTN3P15516 51 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 CCL18P55774 89 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 BATFQ16520 125 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 AMMECR1LQ6DCA0 310 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 Q6ZQT7 251 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 FAM19A2Q8N3H0 131 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 ZNRF2Q8NHG8 242 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 Q8TAT8 98 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 PTH2Q96A98 100 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 AGPAT4-IT1Q9H0P7 198 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 NOP10Q9NPE3 64 aaKnown RBP1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 SPANXCQ9NY87 97 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 ICOSQ9Y6W8 199 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 FAT2Q9NYQ8 4349 aa1.98□□□□□ -2.09
CDC42BPA-212ENST00000478573 DNAH2Q9P225 4427 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRGV2A0A075B6R0 118 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 A0A096LPF7 62 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRGV1A0A0A0MS02 117 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRAV12-1A0A0B4J245 112 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 MUC21A0A0G2JKD1 596 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 NBDYA0A0U1RRE5 68 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 MUC21A0A140T8X8 626 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 A0A1W2PPM0 123 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 A8MWP4 228 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 TMEM262E9PQX1 116 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 M0R2P5 195 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 PPP1R17O96001 155 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 HBDP02042 147 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 ORM1P02763 201 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 SMIM13P0DJ93 91 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 FCER1GP30273 86 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 RNASE4P34096 147 aaKnown RBP1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 CRYBA4P53673 196 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 Q6ZTI0 123 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 C2orf91Q6ZV80 131 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 GOLT1AQ6ZVE7 132 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 Q86TA4 180 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 SIGMAR1Q99720 223 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 PRO0255Q9UI72 69 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 LINC00588Q9Y4M8 146 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 PKD1P98161 4303 aa1.97□□□□□ -2.09
CDC42BPA-212ENST00000478573 TRBV20-1A0A075B6N2 111 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRAV8-1A0A0A6YYK1 113 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 C8orf87E5RJ46 101 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 H3BMG7 143 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 PRM2P04554 102 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 IGLC6P0CF74 106 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 LINC00694P0DN24 101 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 HTN1P15515 57 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 PLNP26678 52 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 GNG5P63218 68 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 RHOHQ15669 191 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 C1orf134Q5TEV5 83 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 C10orf126Q8N4M7 172 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 IFI27L1Q96BM0 104 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 PRELID3AQ96N28 172 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 MAP1LC3AQ9H492 121 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 MRPL16Q9NX20 251 aaKnown RBP1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 SPCS1Q9Y6A9 102 aa1.96□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRGV4A0A0C4DH28 118 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 A0A0J9YY99 117 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 TRBV6-4A0A1B0GX49 114 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 A0A1W2PNN7 141 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 FABP5P3A8MUU1 101 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 A8MWV9 139 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 M0R381 172 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 DPM2O94777 84 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 IGLV6-57P01721 117 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 P0C880 135 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 PRB4P10163 310 aaPredicted RBP1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 RNASE3P12724 160 aaKnown RBP1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 ASIPP42127 132 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 KRTAP25-1Q3LHN0 102 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 Q6Q795 121 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 Q6ZRN7 208 aaPredicted RBP1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 Q8N8P6 123 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 UBE2WQ96B02 151 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 C20orf78Q9BR46 151 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 PRADC1Q9BSG0 188 aa1.95□□□□□ -2.1
CDC42BPA-212ENST00000478573 TP73-AS1Q9UF72 201 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms