RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 BOD1L2Q8IYS8 172 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 SPACA4Q8TDM5 124 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 MIEN1Q9BRT3 115 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 TTTY13Q9BZ97 58 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 NDUFA12Q9UI09 145 aa6.04□□□□□ -1.44
SMARCB1-206ENST00000477836 CXCL5P42830 114 aa6.03□□□□□ -1.44
SMARCB1-206ENST00000477836 CKS1BP61024 79 aa6.03□□□□□ -1.44
SMARCB1-206ENST00000477836 SCGB1D4Q6XE38 83 aa6.03□□□□□ -1.44
SMARCB1-206ENST00000477836 C15orf56Q8N910 161 aa6.03□□□□□ -1.44
SMARCB1-206ENST00000477836 GVQW2A0A096LPI5 108 aaPredicted RBP6.02□□□□□ -1.45
SMARCB1-206ENST00000477836 HERV-K104P63124 156 aa6.02□□□□□ -1.45
SMARCB1-206ENST00000477836 PRR4Q16378 134 aa6.02□□□□□ -1.45
SMARCB1-206ENST00000477836 HIGD2BQ4VC39 106 aa6.02□□□□□ -1.45
SMARCB1-206ENST00000477836 C6orf226Q5I0X4 101 aa6.02□□□□□ -1.45
SMARCB1-206ENST00000477836 ZNF561-AS1K7EIQ3 104 aa6.01□□□□□ -1.45
SMARCB1-206ENST00000477836 DDTP30046 118 aa6.01□□□□□ -1.45
SMARCB1-206ENST00000477836 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
SMARCB1-206ENST00000477836 A0A0J9YXY3 114 aa6□□□□□ -1.45
SMARCB1-206ENST00000477836 PCP4L1A6NKN8 68 aa6□□□□□ -1.45
SMARCB1-206ENST00000477836 TMEM238C9JI98 176 aa6□□□□□ -1.45
SMARCB1-206ENST00000477836 CNBPP62633 177 aaKnown RBP6□□□□□ -1.45
SMARCB1-206ENST00000477836 SRSF9Q13242 221 aaKnown RBP eCLIP6□□□□□ -1.45
SMARCB1-206ENST00000477836 KIAA0087Q14695 138 aa6□□□□□ -1.45
SMARCB1-206ENST00000477836 MEIG1Q5JSS6 88 aa6□□□□□ -1.45
SMARCB1-206ENST00000477836 C2orf82Q6UX34 121 aa5.99□□□□□ -1.45
SMARCB1-206ENST00000477836 C2orf91Q6ZV80 131 aa5.99□□□□□ -1.45
SMARCB1-206ENST00000477836 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
SMARCB1-206ENST00000477836 CAMK2N2Q96S95 79 aa5.99□□□□□ -1.45
SMARCB1-206ENST00000477836 HIGD1BQ9P298 99 aa5.99□□□□□ -1.45
SMARCB1-206ENST00000477836 F8WDY8 70 aa5.98□□□□□ -1.45
SMARCB1-206ENST00000477836 TIMM17BO60830 172 aa5.98□□□□□ -1.45
SMARCB1-206ENST00000477836 C2orf48Q96LS8 159 aa5.98□□□□□ -1.45
SMARCB1-206ENST00000477836 MUC17Q685J3 4493 aa5.97□□□□□ -1.45
SMARCB1-206ENST00000477836 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.97□□□□□ -1.45
SMARCB1-206ENST00000477836 LINC00587B1AMM8 73 aa5.97□□□□□ -1.45
SMARCB1-206ENST00000477836 CARD19Q96LW7 228 aa5.97□□□□□ -1.45
SMARCB1-206ENST00000477836 ERG28Q9UKR5 140 aa5.97□□□□□ -1.45
SMARCB1-206ENST00000477836 IGKV2-24A0A0C4DH68 120 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 TRBV30A0A0K0K1B3 111 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 SLPIP03973 132 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 HSD52Q0P140 79 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 SYCNQ0VAF6 134 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 C10orf25Q5T742 122 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 UNQ6190/PRO20217Q6UXQ8 127 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 HIST1H4GQ99525 98 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 SPANXB1Q9NS25 103 aaPredicted RBP5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 PSORS1C2Q9UIG4 136 aa5.96□□□□□ -1.46
SMARCB1-206ENST00000477836 A0A0U1RRA0 63 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 SMIM13P0DJ93 91 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 PFN2P35080 140 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 TAL2Q16559 108 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 LITAFQ99732 161 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 SPANXDQ9BXN6 97 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 SPANXCQ9NY87 97 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 C6orf48Q9UBA6 75 aa5.95□□□□□ -1.46
SMARCB1-206ENST00000477836 M0R143 59 aa5.94□□□□□ -1.46
SMARCB1-206ENST00000477836 LINC00158P58513 81 aa5.94□□□□□ -1.46
SMARCB1-206ENST00000477836 CTAG1AP78358 180 aa5.94□□□□□ -1.46
SMARCB1-206ENST00000477836 COX17Q14061 63 aa5.94□□□□□ -1.46
SMARCB1-206ENST00000477836 Q6ZRP5 223 aa5.94□□□□□ -1.46
SMARCB1-206ENST00000477836 Q6ZVH6 145 aa5.94□□□□□ -1.46
SMARCB1-206ENST00000477836 COPS9Q8WXC6 57 aa5.94□□□□□ -1.46
SMARCB1-206ENST00000477836 C9orf116Q5BN46 136 aaPredicted RBP5.93□□□□□ -1.46
SMARCB1-206ENST00000477836 MIR7-3HGQ8N6C7 128 aa5.93□□□□□ -1.46
SMARCB1-206ENST00000477836 PRR26Q8N8Z3 221 aa5.93□□□□□ -1.46
SMARCB1-206ENST00000477836 DAND5Q8N907 189 aa5.93□□□□□ -1.46
SMARCB1-206ENST00000477836 NPC2P61916 151 aa5.92□□□□□ -1.46
SMARCB1-206ENST00000477836 ADAMTSL4-AS1Q5T5F5 129 aa5.92□□□□□ -1.46
SMARCB1-206ENST00000477836 CEND1Q8N111 149 aa5.92□□□□□ -1.46
SMARCB1-206ENST00000477836 TMEM238LA0A1B0GVL6 79 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 A6NJY4 79 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 NDUFC2-KCTD14E9PQ53 114 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 IFITM1P13164 125 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 HINT1P49773 126 aaPredicted RBP5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 PTTG1IPP53801 180 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 BATFQ16520 125 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 RNF151Q2KHN1 245 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 PKIGQ9Y2B9 76 aa5.91□□□□□ -1.46
SMARCB1-206ENST00000477836 RPL24P83731 157 aaKnown RBP5.9□□□□□ -1.46
SMARCB1-206ENST00000477836 RPL18AQ02543 176 aaKnown RBP5.9□□□□□ -1.46
SMARCB1-206ENST00000477836 BVES-AS1Q5T3Y7 98 aa5.9□□□□□ -1.46
SMARCB1-206ENST00000477836 LINC00308Q8TCZ7 52 aa5.9□□□□□ -1.46
SMARCB1-206ENST00000477836 LOC107984640A0A0U1RRK4 108 aa5.89□□□□□ -1.47
SMARCB1-206ENST00000477836 TLX1NBP0CAT3 122 aa5.89□□□□□ -1.47
SMARCB1-206ENST00000477836 FXYD2P54710 66 aa5.89□□□□□ -1.47
SMARCB1-206ENST00000477836 MUSTN1Q8IVN3 82 aa5.89□□□□□ -1.47
SMARCB1-206ENST00000477836 PPDPFQ9H3Y8 114 aa5.89□□□□□ -1.47
SMARCB1-206ENST00000477836 SND1-IT1Q9HBX3 110 aa5.89□□□□□ -1.47
SMARCB1-206ENST00000477836 A0A096LNI7 61 aa5.88□□□□□ -1.47
SMARCB1-206ENST00000477836 A6NDN8 102 aa5.88□□□□□ -1.47
SMARCB1-206ENST00000477836 SOSTDC1Q6X4U4 206 aa5.88□□□□□ -1.47
SMARCB1-206ENST00000477836 A4D1N5 150 aa5.87□□□□□ -1.47
SMARCB1-206ENST00000477836 EIF4EBP3O60516 100 aaPredicted RBP5.87□□□□□ -1.47
SMARCB1-206ENST00000477836 GAGE2EQ4V326 116 aa5.87□□□□□ -1.47
SMARCB1-206ENST00000477836 SNHG12Q9BXW3 62 aa5.87□□□□□ -1.47
SMARCB1-206ENST00000477836 XAGE1AQ9HD64 81 aa5.87□□□□□ -1.47
SMARCB1-206ENST00000477836 NHP2Q9NX24 153 aaKnown RBP5.87□□□□□ -1.47
SMARCB1-206ENST00000477836 GAGE2DQ9UEU5 116 aa5.87□□□□□ -1.47
SMARCB1-206ENST00000477836 GAGE2BQ13066 116 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms