RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 BORCS7Q96B45 105 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 GEMIN7Q9H840 131 aaKnown RBP3.94□□□□□ -1.78
PTPRN-214ENST00000477819 CBY1Q9Y3M2 126 aa3.94□□□□□ -1.78
PTPRN-214ENST00000477819 MUC12Q9UKN1 5478 aa3.93□□□□□ -1.78
PTPRN-214ENST00000477819 HIGD1CA8MV81 97 aa3.93□□□□□ -1.78
PTPRN-214ENST00000477819 PDE6DO43924 150 aa3.93□□□□□ -1.78
PTPRN-214ENST00000477819 FAM231DQ6ZW35 169 aa3.93□□□□□ -1.78
PTPRN-214ENST00000477819 SLC7A5P1Q8MH63 180 aa3.93□□□□□ -1.78
PTPRN-214ENST00000477819 Q8NDZ9 215 aa3.93□□□□□ -1.78
PTPRN-214ENST00000477819 TMEM141Q96I45 108 aa3.93□□□□□ -1.78
PTPRN-214ENST00000477819 EIF5A2Q9GZV4 153 aaKnown RBP3.93□□□□□ -1.78
PTPRN-214ENST00000477819 ZNF706Q9Y5V0 76 aaPredicted RBP3.93□□□□□ -1.78
PTPRN-214ENST00000477819 IGLV5-39A0A0G2JS06 123 aa3.92□□□□□ -1.78
PTPRN-214ENST00000477819 IFI27P40305 119 aaPredicted RBP3.92□□□□□ -1.78
PTPRN-214ENST00000477819 TEX43Q6ZNM6 134 aa3.92□□□□□ -1.78
PTPRN-214ENST00000477819 SMCR5Q8TEV8 140 aa3.92□□□□□ -1.78
PTPRN-214ENST00000477819 S100ZQ8WXG8 99 aa3.92□□□□□ -1.78
PTPRN-214ENST00000477819 C20orf78Q9BR46 151 aa3.92□□□□□ -1.78
PTPRN-214ENST00000477819 SMIM2Q9BVW6 85 aa3.92□□□□□ -1.78
PTPRN-214ENST00000477819 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
PTPRN-214ENST00000477819 TRBV24-1A0A075B6N3 115 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 MT1FP04733 61 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 LINC00483Q53H64 154 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 GAGE2AQ6NT46 116 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 MPLKIPQ8TAP9 179 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 PYGO1Q9Y3Y4 419 aa3.91□□□□□ -1.78
PTPRN-214ENST00000477819 SMLR1H3BR10 107 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 NPYP01303 97 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 IGLV6-57P01721 117 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 CKS2P33552 79 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 RAB14P61106 215 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 FAM104BQ5XKR9 115 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 SSBP3-AS1Q7Z2R9 100 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 LINC01551Q86U37 167 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 TIMM17AQ99595 171 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 C2orf88Q9BSF0 95 aa3.9□□□□□ -1.79
PTPRN-214ENST00000477819 PFN2P35080 140 aa3.89□□□□□ -1.79
PTPRN-214ENST00000477819 CXCL5P42830 114 aa3.89□□□□□ -1.79
PTPRN-214ENST00000477819 RIGQ13278 110 aa3.89□□□□□ -1.79
PTPRN-214ENST00000477819 AKAP14Q86UN6 197 aa3.89□□□□□ -1.79
PTPRN-214ENST00000477819 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
PTPRN-214ENST00000477819 AMELXQ99217 191 aa3.89□□□□□ -1.79
PTPRN-214ENST00000477819 LINC00846Q9NV44 126 aa3.89□□□□□ -1.79
PTPRN-214ENST00000477819 SMIM1B2RUZ4 78 aa3.88□□□□□ -1.79
PTPRN-214ENST00000477819 D6R8Y8 96 aa3.88□□□□□ -1.79
PTPRN-214ENST00000477819 RPL37P61927 97 aaKnown RBP3.88□□□□□ -1.79
PTPRN-214ENST00000477819 C2orf66Q6UXQ4 117 aa3.88□□□□□ -1.79
PTPRN-214ENST00000477819 SND1-IT1Q9HBX3 110 aa3.88□□□□□ -1.79
PTPRN-214ENST00000477819 LOC389332A0A1B0GUA5 103 aa3.87□□□□□ -1.79
PTPRN-214ENST00000477819 LINC00862A6NCI5 91 aa3.87□□□□□ -1.79
PTPRN-214ENST00000477819 TEX46H3BTG2 121 aa3.87□□□□□ -1.79
PTPRN-214ENST00000477819 ERC2-IT1O76042 136 aa3.87□□□□□ -1.79
PTPRN-214ENST00000477819 RAB5AP20339 215 aa3.87□□□□□ -1.79
PTPRN-214ENST00000477819 FAM19A3Q7Z5A8 133 aa3.87□□□□□ -1.79
PTPRN-214ENST00000477819 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
PTPRN-214ENST00000477819 HERVK_113P63121 156 aa3.86□□□□□ -1.79
PTPRN-214ENST00000477819 RPL24P83731 157 aaKnown RBP3.86□□□□□ -1.79
PTPRN-214ENST00000477819 HRCT1Q6UXD1 115 aa3.86□□□□□ -1.79
PTPRN-214ENST00000477819 LINC00299Q6ZSB3 139 aa3.86□□□□□ -1.79
PTPRN-214ENST00000477819 BATF3Q9NR55 127 aa3.86□□□□□ -1.79
PTPRN-214ENST00000477819 CEBPGP53567 150 aa3.85□□□□□ -1.79
PTPRN-214ENST00000477819 PDZD11Q5EBL8 140 aa3.85□□□□□ -1.79
PTPRN-214ENST00000477819 C9orf153Q5TBE3 101 aa3.85□□□□□ -1.79
PTPRN-214ENST00000477819 IGIPA6NJ69 53 aa3.84□□□□□ -1.79
PTPRN-214ENST00000477819 SPINK8P0C7L1 97 aa3.84□□□□□ -1.79
PTPRN-214ENST00000477819 V9GYV3 84 aa3.84□□□□□ -1.79
PTPRN-214ENST00000477819 KANTRA0A1W2PQU2 76 aa3.83□□□□□ -1.8
PTPRN-214ENST00000477819 ATP5LO75964 103 aa3.83□□□□□ -1.8
PTPRN-214ENST00000477819 ZNF345Q14585 488 aa3.83□□□□□ -1.8
PTPRN-214ENST00000477819 OSTCQ9NRP0 149 aa3.83□□□□□ -1.8
PTPRN-214ENST00000477819 CYSLTR1Q9Y271 337 aa3.83□□□□□ -1.8
PTPRN-214ENST00000477819 ETDCA0A1B0GVM5 59 aa3.82□□□□□ -1.8
PTPRN-214ENST00000477819 SEC11AP67812 179 aa3.82□□□□□ -1.8
PTPRN-214ENST00000477819 KIAA1644Q3SXP7 199 aa3.82□□□□□ -1.8
PTPRN-214ENST00000477819 ZNF625Q96I27 306 aaPredicted RBP3.82□□□□□ -1.8
PTPRN-214ENST00000477819 NAT8BQ9UHF3 227 aa3.82□□□□□ -1.8
PTPRN-214ENST00000477819 ERG28Q9UKR5 140 aa3.82□□□□□ -1.8
PTPRN-214ENST00000477819 PAM16Q9Y3D7 125 aa3.82□□□□□ -1.8
PTPRN-214ENST00000477819 SPRR1AP35321 89 aa3.81□□□□□ -1.8
PTPRN-214ENST00000477819 FAM74A3Q4VXF1 159 aa3.81□□□□□ -1.8
PTPRN-214ENST00000477819 UQCC3Q6UW78 93 aa3.81□□□□□ -1.8
PTPRN-214ENST00000477819 TMEM136Q6ZRR5 245 aa3.81□□□□□ -1.8
PTPRN-214ENST00000477819 PRELID3AQ96N28 172 aa3.81□□□□□ -1.8
PTPRN-214ENST00000477819 MRPL54Q6P161 138 aaKnown RBP3.8□□□□□ -1.8
PTPRN-214ENST00000477819 Q9BRP9 147 aa3.8□□□□□ -1.8
PTPRN-214ENST00000477819 LIMD2Q9BT23 127 aa3.8□□□□□ -1.8
PTPRN-214ENST00000477819 IGLV5-45A0A087WSX0 123 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 TINCRA0A1B0GVN0 87 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 TMEM250H0YL14 139 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 NCR3O14931 201 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 PPBPP02775 128 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 MT3P25713 68 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 ORMDL3Q8N138 153 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 SMIM7Q9BQ49 75 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 KCNQ1DNQ9H478 68 aa3.79□□□□□ -1.8
PTPRN-214ENST00000477819 SMIM27A0A1W2PRY6 76 aa3.78□□□□□ -1.8
PTPRN-214ENST00000477819 C20orf202A1L168 122 aa3.78□□□□□ -1.8
PTPRN-214ENST00000477819 H7C2G1 150 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms