RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 VPREB1P12018 145 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 ADCYAP1P18509 176 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 CTAG1AP78358 180 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 KIAA1644Q3SXP7 199 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 SPRR4Q96PI1 79 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 GNB1LQ9BYB4 327 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 SND1-IT1Q9HBX3 110 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 ERG28Q9UKR5 140 aa3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 ZNF706Q9Y5V0 76 aaPredicted RBP3.78□□□□□ -1.8
RTFDC1-206ENST00000477485 MT-ND4LP03901 98 aa3.77□□□□□ -1.81
RTFDC1-206ENST00000477485 PMVKQ15126 192 aa3.77□□□□□ -1.81
RTFDC1-206ENST00000477485 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
RTFDC1-206ENST00000477485 IGLV5-45A0A087WSX0 123 aa3.76□□□□□ -1.81
RTFDC1-206ENST00000477485 IGLV9-49A0A0B4J1Y8 123 aa3.76□□□□□ -1.81
RTFDC1-206ENST00000477485 A0A0U1RRA0 63 aa3.76□□□□□ -1.81
RTFDC1-206ENST00000477485 A0A1B0GVG6 124 aa3.76□□□□□ -1.81
RTFDC1-206ENST00000477485 CST9LQ9H4G1 147 aa3.76□□□□□ -1.81
RTFDC1-206ENST00000477485 SMCO4Q9NRQ5 59 aa3.76□□□□□ -1.81
RTFDC1-206ENST00000477485 SPINK1P00995 79 aa3.75□□□□□ -1.81
RTFDC1-206ENST00000477485 MOBPQ13875 183 aa3.75□□□□□ -1.81
RTFDC1-206ENST00000477485 FAM19A2Q8N3H0 131 aa3.75□□□□□ -1.81
RTFDC1-206ENST00000477485 Q8NDZ9 215 aa3.75□□□□□ -1.81
RTFDC1-206ENST00000477485 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
RTFDC1-206ENST00000477485 ETDCA0A1B0GVM5 59 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 NCR3O14931 201 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 ATP6V1G1O75348 118 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 LINC00158P58513 81 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 COX17Q14061 63 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 GAGE2AQ6NT46 116 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 FA2HQ7L5A8 372 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 SMCR5Q8TEV8 140 aa3.74□□□□□ -1.81
RTFDC1-206ENST00000477485 LINC01549A6NIU2 74 aa3.73□□□□□ -1.81
RTFDC1-206ENST00000477485 PRYO14603 147 aa3.73□□□□□ -1.81
RTFDC1-206ENST00000477485 TMEM170BQ5T4T1 132 aa3.73□□□□□ -1.81
RTFDC1-206ENST00000477485 IGLV5-39A0A0G2JS06 123 aa3.72□□□□□ -1.81
RTFDC1-206ENST00000477485 IGLC3P0DOY3 106 aa3.72□□□□□ -1.81
RTFDC1-206ENST00000477485 ZNF22P17026 224 aaPredicted RBP3.72□□□□□ -1.81
RTFDC1-206ENST00000477485 S100A12P80511 92 aa3.72□□□□□ -1.81
RTFDC1-206ENST00000477485 MEIG1Q5JSS6 88 aa3.72□□□□□ -1.81
RTFDC1-206ENST00000477485 C9orf153Q5TBE3 101 aa3.72□□□□□ -1.81
RTFDC1-206ENST00000477485 BOD1L2Q8IYS8 172 aa3.72□□□□□ -1.81
RTFDC1-206ENST00000477485 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
RTFDC1-206ENST00000477485 SLC25A20O43772 301 aa3.71□□□□□ -1.82
RTFDC1-206ENST00000477485 XP32Q5T750 250 aa3.71□□□□□ -1.82
RTFDC1-206ENST00000477485 SFTA2Q6UW10 78 aa3.71□□□□□ -1.82
RTFDC1-206ENST00000477485 Q8N377 158 aa3.71□□□□□ -1.82
RTFDC1-206ENST00000477485 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
RTFDC1-206ENST00000477485 M0R2T5 61 aa3.7□□□□□ -1.82
RTFDC1-206ENST00000477485 CFC1BP0CG36 223 aa3.7□□□□□ -1.82
RTFDC1-206ENST00000477485 SMIM13P0DJ93 91 aa3.7□□□□□ -1.82
RTFDC1-206ENST00000477485 S100PP25815 95 aa3.7□□□□□ -1.82
RTFDC1-206ENST00000477485 PMCHL1Q16048 86 aa3.7□□□□□ -1.82
RTFDC1-206ENST00000477485 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
RTFDC1-206ENST00000477485 TRBV10-3A0A0K0K1G6 114 aa3.69□□□□□ -1.82
RTFDC1-206ENST00000477485 C9orf92A6NGG3 77 aa3.69□□□□□ -1.82
RTFDC1-206ENST00000477485 FABP9Q0Z7S8 132 aa3.69□□□□□ -1.82
RTFDC1-206ENST00000477485 PCOTHQ58A44 107 aa3.69□□□□□ -1.82
RTFDC1-206ENST00000477485 BAGE3Q86Y29 109 aa3.69□□□□□ -1.82
RTFDC1-206ENST00000477485 LINC01546A6NGU7 62 aa3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 LINC00310P59036 64 aa3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 RPS29P62273 56 aaKnown RBP3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 MT1HP80294 61 aa3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 LINC00483Q53H64 154 aa3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 SSBP3-AS1Q7Z2R9 100 aa3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 MIR7-3HGQ8N6C7 128 aa3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 KCNQ1DNQ9H478 68 aa3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 CHTOPQ9Y3Y2 248 aaKnown RBP3.68□□□□□ -1.82
RTFDC1-206ENST00000477485 TRAV9-1A0A075B6T8 112 aa3.67□□□□□ -1.82
RTFDC1-206ENST00000477485 B5MCH6 92 aa3.67□□□□□ -1.82
RTFDC1-206ENST00000477485 ERC2-IT1O76042 136 aa3.67□□□□□ -1.82
RTFDC1-206ENST00000477485 HBDP02042 147 aa3.67□□□□□ -1.82
RTFDC1-206ENST00000477485 HRCT1Q6UXD1 115 aa3.67□□□□□ -1.82
RTFDC1-206ENST00000477485 A0A096LNJ9 63 aa3.66□□□□□ -1.82
RTFDC1-206ENST00000477485 KRTAP4-16G5E9R7 235 aaPredicted RBP3.66□□□□□ -1.82
RTFDC1-206ENST00000477485 DDTP30046 118 aa3.66□□□□□ -1.82
RTFDC1-206ENST00000477485 SPRR1AP35321 89 aa3.66□□□□□ -1.82
RTFDC1-206ENST00000477485 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
RTFDC1-206ENST00000477485 TMEM223A0PJW6 202 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 C9orf118A6NHY6 69 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 LINC00614P0C842 121 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 COX19Q49B96 90 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 S100A7L2Q5SY68 101 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 Q9BRP9 147 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 LIMD2Q9BT23 127 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 MAP1LC3CQ9BXW4 147 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 SEC11CQ9BY50 192 aa3.65□□□□□ -1.83
RTFDC1-206ENST00000477485 LINC00587B1AMM8 73 aa3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 H0Y8G0 127 aa3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 KRTAP10-6P60371 365 aaPredicted RBP3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 HERV-K104P63124 156 aa3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 JOSD1Q15040 202 aaPredicted RBP3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 Q6ZRX8 168 aa3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 C18orf32Q8TCD1 76 aa3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 MIEN1Q9BRT3 115 aa3.64□□□□□ -1.83
RTFDC1-206ENST00000477485 MYMXA0A1B0GTQ4 84 aa3.63□□□□□ -1.83
RTFDC1-206ENST00000477485 IGLV6-57P01721 117 aa3.63□□□□□ -1.83
RTFDC1-206ENST00000477485 KRTAP19-2Q3LHN2 52 aa3.63□□□□□ -1.83
RTFDC1-206ENST00000477485 ST20-AS1Q8NBB2 130 aa3.63□□□□□ -1.83
RTFDC1-206ENST00000477485 URB1-AS1Q96HZ7 61 aa3.63□□□□□ -1.83
RTFDC1-206ENST00000477485 TRAPPC1Q9Y5R8 145 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms