RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 NOP10Q9NPE3 64 aaKnown RBP10.56□□□□□ -0.72
CLSTN1-205ENST00000477264 TRGV2A0A075B6R0 118 aa10.55□□□□□ -0.72
CLSTN1-205ENST00000477264 LINC01547P58512 204 aaPredicted RBP10.54□□□□□ -0.72
CLSTN1-205ENST00000477264 MAST4O15021 2626 aa10.54□□□□□ -0.72
CLSTN1-205ENST00000477264 TRGV4A0A0C4DH28 118 aa10.53□□□□□ -0.72
CLSTN1-205ENST00000477264 LOC100131303A0A0U1RQF7 123 aa10.53□□□□□ -0.72
CLSTN1-205ENST00000477264 LINC00575Q6W349 94 aa10.53□□□□□ -0.72
CLSTN1-205ENST00000477264 C2CD3Q4AC94 2353 aa10.52□□□□□ -0.72
CLSTN1-205ENST00000477264 CMC4P56277 68 aaPredicted RBP10.52□□□□□ -0.72
CLSTN1-205ENST00000477264 C9orf66Q5T8R8 295 aa10.52□□□□□ -0.72
CLSTN1-205ENST00000477264 MUC7Q8TAX7 377 aa10.52□□□□□ -0.72
CLSTN1-205ENST00000477264 Q6ZVQ6 151 aa10.52□□□□□ -0.73
CLSTN1-205ENST00000477264 C11orf68Q9H3H3 251 aaKnown RBP10.51□□□□□ -0.73
CLSTN1-205ENST00000477264 WNK1Q9H4A3 2382 aa10.5□□□□□ -0.73
CLSTN1-205ENST00000477264 NIPBLQ6KC79 2804 aaeCLIP10.5□□□□□ -0.73
CLSTN1-205ENST00000477264 PLAC8L1A1L4L8 177 aa10.5□□□□□ -0.73
CLSTN1-205ENST00000477264 KRTAP10-3P60369 221 aa10.5□□□□□ -0.73
CLSTN1-205ENST00000477264 LINC00336Q6ZUF6 198 aa10.5□□□□□ -0.73
CLSTN1-205ENST00000477264 A0A1B0GUV1 79 aa10.49□□□□□ -0.73
CLSTN1-205ENST00000477264 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
CLSTN1-205ENST00000477264 F8WEM9 126 aa10.49□□□□□ -0.73
CLSTN1-205ENST00000477264 LAMTOR3Q9UHA4 124 aa10.48□□□□□ -0.73
CLSTN1-205ENST00000477264 IGHV4-28A0A0C4DH34 117 aa10.48□□□□□ -0.73
CLSTN1-205ENST00000477264 ERC2-IT1O76042 136 aa10.48□□□□□ -0.73
CLSTN1-205ENST00000477264 HAMPP81172 84 aa10.48□□□□□ -0.73
CLSTN1-205ENST00000477264 RMI2Q96E14 147 aa10.46□□□□□ -0.73
CLSTN1-205ENST00000477264 FP248Q71RG6 208 aaPredicted RBP10.46□□□□□ -0.74
CLSTN1-205ENST00000477264 TRAV10A0A0B4J240 114 aa10.45□□□□□ -0.74
CLSTN1-205ENST00000477264 TRBV7-4A0A0J9YYF1 115 aa10.45□□□□□ -0.74
CLSTN1-205ENST00000477264 JMJD1CQ15652 2540 aa10.45□□□□□ -0.74
CLSTN1-205ENST00000477264 SNURFQ9Y675 71 aa10.44□□□□□ -0.74
CLSTN1-205ENST00000477264 TRBV7-6A0A0J9YX20 115 aa10.43□□□□□ -0.74
CLSTN1-205ENST00000477264 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-205ENST00000477264 KIAA0087Q14695 138 aa10.43□□□□□ -0.74
CLSTN1-205ENST00000477264 GIG44P09565 113 aaPredicted RBP10.42□□□□□ -0.74
CLSTN1-205ENST00000477264 MIFP14174 115 aa10.42□□□□□ -0.74
CLSTN1-205ENST00000477264 Q8N3U1 123 aa10.42□□□□□ -0.74
CLSTN1-205ENST00000477264 C1orf43Q9BWL3 253 aa10.42□□□□□ -0.74
CLSTN1-205ENST00000477264 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
CLSTN1-205ENST00000477264 TEP1Q99973 2627 aaKnown RBP10.4□□□□□ -0.74
CLSTN1-205ENST00000477264 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
CLSTN1-205ENST00000477264 NREPQ16612 68 aa10.39□□□□□ -0.75
CLSTN1-205ENST00000477264 M0R2N4 97 aa10.39□□□□□ -0.75
CLSTN1-205ENST00000477264 IGLV6-57P01721 117 aa10.39□□□□□ -0.75
CLSTN1-205ENST00000477264 KRTAP24-1Q3LI83 254 aa10.38□□□□□ -0.75
CLSTN1-205ENST00000477264 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.38□□□□□ -0.75
CLSTN1-205ENST00000477264 Q6ZQY7 126 aa10.38□□□□□ -0.75
CLSTN1-205ENST00000477264 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
CLSTN1-205ENST00000477264 TM2D3Q9BRN9 247 aa10.38□□□□□ -0.75
CLSTN1-205ENST00000477264 ATRQ13535 2644 aa10.38□□□□□ -0.75
CLSTN1-205ENST00000477264 F8WDY8 70 aa10.37□□□□□ -0.75
CLSTN1-205ENST00000477264 TMEM254Q8TBM7 123 aa10.37□□□□□ -0.75
CLSTN1-205ENST00000477264 TENM1Q9UKZ4 2725 aa10.37□□□□□ -0.75
CLSTN1-205ENST00000477264 SPATA3Q8NHX4 192 aa10.36□□□□□ -0.75
CLSTN1-205ENST00000477264 LINC00612Q8N6U2 182 aa10.36□□□□□ -0.75
CLSTN1-205ENST00000477264 GYPEP15421 78 aa10.35□□□□□ -0.75
CLSTN1-205ENST00000477264 Q8NDZ9 215 aa10.35□□□□□ -0.75
CLSTN1-205ENST00000477264 DIRC1Q969H9 104 aa10.35□□□□□ -0.75
CLSTN1-205ENST00000477264 BPY2O14599 106 aa10.34□□□□□ -0.75
CLSTN1-205ENST00000477264 RPL35AP18077 110 aaKnown RBP10.34□□□□□ -0.75
CLSTN1-205ENST00000477264 CHCHD10Q8WYQ3 142 aaPredicted RBP10.34□□□□□ -0.75
CLSTN1-205ENST00000477264 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
CLSTN1-205ENST00000477264 A0A0J9YWU9 116 aa10.32□□□□□ -0.76
CLSTN1-205ENST00000477264 PRYO14603 147 aa10.32□□□□□ -0.76
CLSTN1-205ENST00000477264 IGHV4-30-4P0DP06 118 aa10.32□□□□□ -0.76
CLSTN1-205ENST00000477264 COX7BP24311 80 aa10.32□□□□□ -0.76
CLSTN1-205ENST00000477264 C9orf116Q5BN46 136 aaPredicted RBP10.31□□□□□ -0.76
CLSTN1-205ENST00000477264 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
CLSTN1-205ENST00000477264 LINC00269Q8N2A0 174 aa10.31□□□□□ -0.76
CLSTN1-205ENST00000477264 PRO0255Q9UI72 69 aa10.31□□□□□ -0.76
CLSTN1-205ENST00000477264 BRK1Q8WUW1 75 aa10.3□□□□□ -0.76
CLSTN1-205ENST00000477264 C19orf73Q9NVV2 129 aa10.3□□□□□ -0.76
CLSTN1-205ENST00000477264 A0A0U1RQV1 116 aa10.29□□□□□ -0.76
CLSTN1-205ENST00000477264 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
CLSTN1-205ENST00000477264 GVQW2A0A096LPI5 108 aaPredicted RBP10.29□□□□□ -0.76
CLSTN1-205ENST00000477264 SPAG11BQ08648 103 aa10.29□□□□□ -0.76
CLSTN1-205ENST00000477264 REG3AQ06141 175 aa10.28□□□□□ -0.76
CLSTN1-205ENST00000477264 ESRGQ1W209 222 aa10.28□□□□□ -0.76
CLSTN1-205ENST00000477264 ELOF1P60002 83 aaKnown RBP10.28□□□□□ -0.76
CLSTN1-205ENST00000477264 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
CLSTN1-205ENST00000477264 VWFP04275 2813 aa10.28□□□□□ -0.76
CLSTN1-205ENST00000477264 DEFB130BP0DP73 79 aa10.27□□□□□ -0.77
CLSTN1-205ENST00000477264 DEFB130AP0DP74 79 aa10.27□□□□□ -0.77
CLSTN1-205ENST00000477264 FUSP35637 526 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLSTN1-205ENST00000477264 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
CLSTN1-205ENST00000477264 OCR1Q9BZK8 76 aa10.26□□□□□ -0.77
CLSTN1-205ENST00000477264 WFDC10AQ9H1F0 79 aa10.26□□□□□ -0.77
CLSTN1-205ENST00000477264 FBN1P35555 2871 aaKnown RBP10.26□□□□□ -0.77
CLSTN1-205ENST00000477264 ANGP03950 147 aaKnown RBP10.26□□□□□ -0.77
CLSTN1-205ENST00000477264 IGKV4-1P06312 121 aa10.26□□□□□ -0.77
CLSTN1-205ENST00000477264 ZNF73O43830 326 aaPredicted RBP10.25□□□□□ -0.77
CLSTN1-205ENST00000477264 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
CLSTN1-205ENST00000477264 UNQ6190/PRO20217Q6UXQ8 127 aa10.24□□□□□ -0.77
CLSTN1-205ENST00000477264 V9GYY9 64 aa10.24□□□□□ -0.77
CLSTN1-205ENST00000477264 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
CLSTN1-205ENST00000477264 C10orf25Q5T742 122 aa10.22□□□□□ -0.77
CLSTN1-205ENST00000477264 FAM229BQ4G0N7 80 aa10.21□□□□□ -0.77
CLSTN1-205ENST00000477264 CELA1Q9UNI1 258 aa10.21□□□□□ -0.77
CLSTN1-205ENST00000477264 Q6ZTC4 211 aa10.21□□□□□ -0.78
CLSTN1-205ENST00000477264 TRRAPQ9Y4A5 3859 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms