RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 FAM240AA0A1B0GVK7 77 aa7.67□□□□□ -1.18
NUP188-205ENST00000477069 K7EIL1 84 aa7.67□□□□□ -1.18
NUP188-205ENST00000477069 C15orf56Q8N910 161 aa7.66□□□□□ -1.18
NUP188-205ENST00000477069 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
NUP188-205ENST00000477069 TMEM126AQ9H061 195 aa7.66□□□□□ -1.18
NUP188-205ENST00000477069 LINC00167Q96N53 147 aa7.65□□□□□ -1.18
NUP188-205ENST00000477069 NCR3O14931 201 aa7.65□□□□□ -1.18
NUP188-205ENST00000477069 LECT2O14960 151 aa7.65□□□□□ -1.19
NUP188-205ENST00000477069 DNAH10OSP0CZ25 163 aa7.65□□□□□ -1.19
NUP188-205ENST00000477069 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
NUP188-205ENST00000477069 DNAL4O96015 105 aa7.63□□□□□ -1.19
NUP188-205ENST00000477069 OBSCN-AS1Q96MR7 158 aa7.63□□□□□ -1.19
NUP188-205ENST00000477069 HIGD2BQ4VC39 106 aa7.63□□□□□ -1.19
NUP188-205ENST00000477069 A0A1B0GX51 115 aa7.62□□□□□ -1.19
NUP188-205ENST00000477069 IGLV6-57P01721 117 aa7.62□□□□□ -1.19
NUP188-205ENST00000477069 C9orf129Q5T035 196 aaKnown RBP7.62□□□□□ -1.19
NUP188-205ENST00000477069 C15orf53Q8NAA6 179 aa7.62□□□□□ -1.19
NUP188-205ENST00000477069 C2orf48Q96LS8 159 aa7.62□□□□□ -1.19
NUP188-205ENST00000477069 ZNF561-AS1K7EIQ3 104 aa7.62□□□□□ -1.19
NUP188-205ENST00000477069 C1orf43Q9BWL3 253 aa7.62□□□□□ -1.19
NUP188-205ENST00000477069 CAMK2N2Q96S95 79 aa7.61□□□□□ -1.19
NUP188-205ENST00000477069 Q6ZRU5 148 aa7.61□□□□□ -1.19
NUP188-205ENST00000477069 Q8N814 137 aa7.61□□□□□ -1.19
NUP188-205ENST00000477069 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
NUP188-205ENST00000477069 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
NUP188-205ENST00000477069 C6orf99Q4VX62 202 aa7.6□□□□□ -1.19
NUP188-205ENST00000477069 SLPIP03973 132 aa7.6□□□□□ -1.19
NUP188-205ENST00000477069 ACYP1P07311 99 aa7.6□□□□□ -1.19
NUP188-205ENST00000477069 NHLRC4P0CG21 123 aaPredicted RBP7.6□□□□□ -1.19
NUP188-205ENST00000477069 SDIM1Q6ZPB5 146 aa7.6□□□□□ -1.19
NUP188-205ENST00000477069 COL6A5A8TX70 2615 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 INAFM2P0DMQ5 153 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 S100A7L2Q5SY68 101 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 NBEAL1Q6ZS30 2694 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 DYNC2H1Q8NCM8 4307 aaKnown RBP7.59□□□□□ -1.19
NUP188-205ENST00000477069 F8WDY8 70 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 RPL18AQ02543 176 aaKnown RBP7.59□□□□□ -1.19
NUP188-205ENST00000477069 MRAPQ8TCY5 172 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 XAGE1AQ9HD64 81 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 ORMDL1Q9P0S3 153 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 NOTCH1P46531 2555 aa7.59□□□□□ -1.19
NUP188-205ENST00000477069 IGKV2D-24A0A075B6R9 120 aa7.58□□□□□ -1.2
NUP188-205ENST00000477069 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
NUP188-205ENST00000477069 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
NUP188-205ENST00000477069 SNCGO76070 127 aa7.57□□□□□ -1.2
NUP188-205ENST00000477069 VPREB1P12018 145 aa7.57□□□□□ -1.2
NUP188-205ENST00000477069 LINC00575Q6W349 94 aa7.57□□□□□ -1.2
NUP188-205ENST00000477069 SMCR5Q8TEV8 140 aa7.57□□□□□ -1.2
NUP188-205ENST00000477069 TTC32Q5I0X7 151 aa7.56□□□□□ -1.2
NUP188-205ENST00000477069 Q6Q795 121 aa7.56□□□□□ -1.2
NUP188-205ENST00000477069 TRBV10-3A0A0K0K1G6 114 aa7.56□□□□□ -1.2
NUP188-205ENST00000477069 UPK3BQ9BT76 320 aa7.56□□□□□ -1.2
NUP188-205ENST00000477069 COL7A1Q02388 2944 aa7.55□□□□□ -1.2
NUP188-205ENST00000477069 C5orf47Q569G3 176 aa7.55□□□□□ -1.2
NUP188-205ENST00000477069 Q6ZRP5 223 aa7.55□□□□□ -1.2
NUP188-205ENST00000477069 C14orf132Q9NPU4 83 aa7.55□□□□□ -1.2
NUP188-205ENST00000477069 TRAV23DV6A0A075B6W5 121 aa7.54□□□□□ -1.2
NUP188-205ENST00000477069 SYCNQ0VAF6 134 aa7.54□□□□□ -1.2
NUP188-205ENST00000477069 TRBV7-7A0A0K0K1E9 115 aa7.53□□□□□ -1.2
NUP188-205ENST00000477069 LYSTQ99698 3801 aa7.53□□□□□ -1.2
NUP188-205ENST00000477069 TMEM256-PLSCR3K7ERE1 68 aa7.53□□□□□ -1.2
NUP188-205ENST00000477069 hADV29S1A0JD25 119 aa7.52□□□□□ -1.21
NUP188-205ENST00000477069 GAGE2BQ13066 116 aa7.52□□□□□ -1.21
NUP188-205ENST00000477069 GAGE2EQ4V326 116 aa7.52□□□□□ -1.21
NUP188-205ENST00000477069 CASC10Q5T4H9 136 aa7.52□□□□□ -1.21
NUP188-205ENST00000477069 GAGE2AQ6NT46 116 aa7.52□□□□□ -1.21
NUP188-205ENST00000477069 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.21
NUP188-205ENST00000477069 NDUFV3P56181 108 aaKnown RBP7.52□□□□□ -1.21
NUP188-205ENST00000477069 MDFIQ99750 246 aa7.52□□□□□ -1.21
NUP188-205ENST00000477069 M0R378 163 aa7.51□□□□□ -1.21
NUP188-205ENST00000477069 TLX1NBP0CAT3 122 aa7.51□□□□□ -1.21
NUP188-205ENST00000477069 DIRC1Q969H9 104 aa7.51□□□□□ -1.21
NUP188-205ENST00000477069 ZNF73O43830 326 aaPredicted RBP7.51□□□□□ -1.21
NUP188-205ENST00000477069 TRBV7-6A0A0J9YX20 115 aa7.51□□□□□ -1.21
NUP188-205ENST00000477069 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
NUP188-205ENST00000477069 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
NUP188-205ENST00000477069 USP17L23D6RBM5 183 aa7.5□□□□□ -1.21
NUP188-205ENST00000477069 JMJD7-PLA2G4BH0Y9G9 81 aa7.5□□□□□ -1.21
NUP188-205ENST00000477069 DNAH10Q8IVF4 4471 aa7.5□□□□□ -1.21
NUP188-205ENST00000477069 CCKP06307 115 aa7.48□□□□□ -1.21
NUP188-205ENST00000477069 RMI2Q96E14 147 aa7.48□□□□□ -1.21
NUP188-205ENST00000477069 IMUPQ9GZP8 106 aa7.48□□□□□ -1.21
NUP188-205ENST00000477069 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
NUP188-205ENST00000477069 COX7BP24311 80 aa7.47□□□□□ -1.21
NUP188-205ENST00000477069 SERTAD4-AS1Q5TG53 156 aa7.47□□□□□ -1.21
NUP188-205ENST00000477069 LINC00846Q9NV44 126 aa7.47□□□□□ -1.21
NUP188-205ENST00000477069 CSMD3Q7Z407 3707 aa7.46□□□□□ -1.21
NUP188-205ENST00000477069 Q6ZQY7 126 aa7.46□□□□□ -1.21
NUP188-205ENST00000477069 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
NUP188-205ENST00000477069 B9D2Q9BPU9 175 aa7.46□□□□□ -1.22
NUP188-205ENST00000477069 KRTAP1-5Q9BYS1 174 aa7.46□□□□□ -1.22
NUP188-205ENST00000477069 DNAH7Q8WXX0 4024 aa7.45□□□□□ -1.22
NUP188-205ENST00000477069 H3BQ85 93 aa7.45□□□□□ -1.22
NUP188-205ENST00000477069 APLNQ9ULZ1 77 aa7.45□□□□□ -1.22
NUP188-205ENST00000477069 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
NUP188-205ENST00000477069 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.45□□□□□ -1.22
NUP188-205ENST00000477069 KCNQ1DNQ9H478 68 aa7.45□□□□□ -1.22
NUP188-205ENST00000477069 LOC107984640A0A0U1RRK4 108 aa7.44□□□□□ -1.22
NUP188-205ENST00000477069 PLECQ15149 4684 aaKnown RBP7.44□□□□□ -1.22
NUP188-205ENST00000477069 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms