RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PRR3P79522 188 aaKnown RBP6.5□□□□□ -1.37
USP39-214ENST00000474572 CAMK2N2Q96S95 79 aa6.5□□□□□ -1.37
USP39-214ENST00000474572 ANK2Q01484 3957 aa6.49□□□□□ -1.37
USP39-214ENST00000474572 TENM3Q9P273 2699 aa6.49□□□□□ -1.37
USP39-214ENST00000474572 IGLV6-57P01721 117 aa6.49□□□□□ -1.37
USP39-214ENST00000474572 HIGD2BQ4VC39 106 aa6.49□□□□□ -1.37
USP39-214ENST00000474572 Q6ZRU5 148 aa6.49□□□□□ -1.37
USP39-214ENST00000474572 MRAPQ8TCY5 172 aa6.49□□□□□ -1.37
USP39-214ENST00000474572 NCR3O14931 201 aa6.48□□□□□ -1.37
USP39-214ENST00000474572 MDFIQ99750 246 aa6.48□□□□□ -1.37
USP39-214ENST00000474572 PKD1L1Q8TDX9 2849 aa6.48□□□□□ -1.37
USP39-214ENST00000474572 IGKV2D-24A0A075B6R9 120 aa6.47□□□□□ -1.37
USP39-214ENST00000474572 LECT2O14960 151 aa6.47□□□□□ -1.37
USP39-214ENST00000474572 DNAL4O96015 105 aa6.47□□□□□ -1.37
USP39-214ENST00000474572 VPREB1P12018 145 aa6.47□□□□□ -1.37
USP39-214ENST00000474572 XGP55808 180 aa6.47□□□□□ -1.37
USP39-214ENST00000474572 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
USP39-214ENST00000474572 Q9HAA7 133 aa6.47□□□□□ -1.37
USP39-214ENST00000474572 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
USP39-214ENST00000474572 TLX1NBP0CAT3 122 aa6.46□□□□□ -1.38
USP39-214ENST00000474572 B9D2Q9BPU9 175 aa6.46□□□□□ -1.38
USP39-214ENST00000474572 SYCNQ0VAF6 134 aa6.45□□□□□ -1.38
USP39-214ENST00000474572 C6orf99Q4VX62 202 aa6.45□□□□□ -1.38
USP39-214ENST00000474572 S100A7L2Q5SY68 101 aa6.45□□□□□ -1.38
USP39-214ENST00000474572 Q8N814 137 aa6.45□□□□□ -1.38
USP39-214ENST00000474572 RMI2Q96E14 147 aa6.45□□□□□ -1.38
USP39-214ENST00000474572 DNAH1Q9P2D7 4330 aa6.44□□□□□ -1.38
USP39-214ENST00000474572 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
USP39-214ENST00000474572 ACYP1P07311 99 aa6.44□□□□□ -1.38
USP39-214ENST00000474572 INAFM2P0DMQ5 153 aa6.44□□□□□ -1.38
USP39-214ENST00000474572 RPL18AQ02543 176 aaKnown RBP6.44□□□□□ -1.38
USP39-214ENST00000474572 LINC00575Q6W349 94 aa6.44□□□□□ -1.38
USP39-214ENST00000474572 ORMDL1Q9P0S3 153 aa6.44□□□□□ -1.38
USP39-214ENST00000474572 SNCGO76070 127 aa6.43□□□□□ -1.38
USP39-214ENST00000474572 XAGE1AQ9HD64 81 aa6.43□□□□□ -1.38
USP39-214ENST00000474572 PLA2G2DQ9UNK4 145 aa6.43□□□□□ -1.38
USP39-214ENST00000474572 DNAH9Q9NYC9 4486 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 TRAV23DV6A0A075B6W5 121 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 TRBV7-6A0A0J9YX20 115 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 TRBV10-3A0A0K0K1G6 114 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 M0R378 163 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 Q6ZRP5 223 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
USP39-214ENST00000474572 USP17L23D6RBM5 183 aa6.41□□□□□ -1.38
USP39-214ENST00000474572 C21orf62-AS1Q17RA5 79 aa6.41□□□□□ -1.38
USP39-214ENST00000474572 C9orf129Q5T035 196 aaKnown RBP6.41□□□□□ -1.38
USP39-214ENST00000474572 Q6Q795 121 aa6.41□□□□□ -1.38
USP39-214ENST00000474572 DIRC1Q969H9 104 aa6.41□□□□□ -1.38
USP39-214ENST00000474572 IGLV5-37A0A075B6J1 123 aa6.4□□□□□ -1.38
USP39-214ENST00000474572 SLPIP03973 132 aa6.4□□□□□ -1.38
USP39-214ENST00000474572 CASC10Q5T4H9 136 aa6.4□□□□□ -1.38
USP39-214ENST00000474572 COL6A5A8TX70 2615 aa6.4□□□□□ -1.39
USP39-214ENST00000474572 hADV29S1A0JD25 119 aa6.39□□□□□ -1.39
USP39-214ENST00000474572 TMEM256-PLSCR3K7ERE1 68 aa6.39□□□□□ -1.39
USP39-214ENST00000474572 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
USP39-214ENST00000474572 DYNC2H1Q8NCM8 4307 aaKnown RBP6.39□□□□□ -1.39
USP39-214ENST00000474572 JMJD7-PLA2G4BH0Y9G9 81 aa6.38□□□□□ -1.39
USP39-214ENST00000474572 H3BQ85 93 aa6.38□□□□□ -1.39
USP39-214ENST00000474572 ZNF73O43830 326 aaPredicted RBP6.38□□□□□ -1.39
USP39-214ENST00000474572 NHLRC4P0CG21 123 aaPredicted RBP6.38□□□□□ -1.39
USP39-214ENST00000474572 KRTAP1-5Q9BYS1 174 aa6.38□□□□□ -1.39
USP39-214ENST00000474572 GHRHP01286 108 aa6.37□□□□□ -1.39
USP39-214ENST00000474572 COX7BP24311 80 aa6.37□□□□□ -1.39
USP39-214ENST00000474572 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
USP39-214ENST00000474572 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
USP39-214ENST00000474572 TRBV7-7A0A0K0K1E9 115 aa6.36□□□□□ -1.39
USP39-214ENST00000474572 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.36□□□□□ -1.39
USP39-214ENST00000474572 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
USP39-214ENST00000474572 SMCR5Q8TEV8 140 aa6.36□□□□□ -1.39
USP39-214ENST00000474572 C14orf132Q9NPU4 83 aa6.36□□□□□ -1.39
USP39-214ENST00000474572 TTC32Q5I0X7 151 aa6.35□□□□□ -1.39
USP39-214ENST00000474572 SERTAD4-AS1Q5TG53 156 aa6.35□□□□□ -1.39
USP39-214ENST00000474572 KCNQ1DNQ9H478 68 aa6.35□□□□□ -1.39
USP39-214ENST00000474572 NOTCH1P46531 2555 aa6.35□□□□□ -1.39
USP39-214ENST00000474572 NUPR2A6NF83 97 aa6.34□□□□□ -1.39
USP39-214ENST00000474572 CCKP06307 115 aa6.34□□□□□ -1.39
USP39-214ENST00000474572 LINC00643Q86TS7 51 aa6.34□□□□□ -1.39
USP39-214ENST00000474572 C7orf33Q8WU49 177 aa6.34□□□□□ -1.39
USP39-214ENST00000474572 NBEAL1Q6ZS30 2694 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 LOC107984640A0A0U1RRK4 108 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 SPRR1AP35321 89 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 CNBPP62633 177 aaKnown RBP6.33□□□□□ -1.4
USP39-214ENST00000474572 GAGE2AQ6NT46 116 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 Q6ZQY7 126 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 NKAPP1Q8N9T2 125 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 IMUPQ9GZP8 106 aa6.33□□□□□ -1.4
USP39-214ENST00000474572 PRYO14603 147 aa6.32□□□□□ -1.4
USP39-214ENST00000474572 GAGE2BQ13066 116 aa6.32□□□□□ -1.4
USP39-214ENST00000474572 UBE2DNLQ8IWF7 75 aa6.32□□□□□ -1.4
USP39-214ENST00000474572 LOC110117498A0A087WWA1 95 aa6.31□□□□□ -1.4
USP39-214ENST00000474572 A0A1B0GV72 72 aa6.31□□□□□ -1.4
USP39-214ENST00000474572 KRTAP4-16G5E9R7 235 aaPredicted RBP6.31□□□□□ -1.4
USP39-214ENST00000474572 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
USP39-214ENST00000474572 C14orf177Q52M58 125 aa6.3□□□□□ -1.4
USP39-214ENST00000474572 Q6ZQT0 140 aa6.3□□□□□ -1.4
USP39-214ENST00000474572 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
USP39-214ENST00000474572 Q6JHZ5 121 aa6.29□□□□□ -1.4
USP39-214ENST00000474572 NBDYA0A0U1RRE5 68 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms