RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 MYMXA0A1B0GTQ4 84 aa12.29□□□□□ -0.44
SNX13-206ENST00000474067 H0Y8G0 127 aa12.29□□□□□ -0.44
SNX13-206ENST00000474067 SERF1AO75920 110 aa12.29□□□□□ -0.44
SNX13-206ENST00000474067 IGKV2D-28P01615 120 aa12.29□□□□□ -0.44
SNX13-206ENST00000474067 HERVK_113P61574 105 aa12.29□□□□□ -0.44
SNX13-206ENST00000474067 SLC7A5P1Q8MH63 180 aa12.28□□□□□ -0.44
SNX13-206ENST00000474067 CRYGAP11844 174 aa12.27□□□□□ -0.45
SNX13-206ENST00000474067 S100A12P80511 92 aa12.27□□□□□ -0.45
SNX13-206ENST00000474067 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
SNX13-206ENST00000474067 NDUFA12Q9UI09 145 aa12.25□□□□□ -0.45
SNX13-206ENST00000474067 M0R378 163 aa12.24□□□□□ -0.45
SNX13-206ENST00000474067 DPM2O94777 84 aa12.24□□□□□ -0.45
SNX13-206ENST00000474067 FAM19A1Q7Z5A9 133 aa12.24□□□□□ -0.45
SNX13-206ENST00000474067 TMEM126AQ9H061 195 aa12.24□□□□□ -0.45
SNX13-206ENST00000474067 COLCA2A8K830 154 aa12.23□□□□□ -0.45
SNX13-206ENST00000474067 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
SNX13-206ENST00000474067 NMUP48645 174 aa12.22□□□□□ -0.45
SNX13-206ENST00000474067 A0A0U1RRA0 63 aa12.21□□□□□ -0.45
SNX13-206ENST00000474067 LEPROTO15243 131 aa12.21□□□□□ -0.45
SNX13-206ENST00000474067 SMIM13P0DJ93 91 aa12.21□□□□□ -0.45
SNX13-206ENST00000474067 FABP4P15090 132 aa12.21□□□□□ -0.45
SNX13-206ENST00000474067 FAM229BQ4G0N7 80 aa12.21□□□□□ -0.45
SNX13-206ENST00000474067 KRTAP13-1Q8IUC0 172 aa12.21□□□□□ -0.45
SNX13-206ENST00000474067 IGKCP01834 107 aa12.2□□□□□ -0.46
SNX13-206ENST00000474067 BOD1L2Q8IYS8 172 aa12.2□□□□□ -0.46
SNX13-206ENST00000474067 MIR7-3HGQ8N6C7 128 aa12.2□□□□□ -0.46
SNX13-206ENST00000474067 TYMSOSQ8TAI1 123 aa12.2□□□□□ -0.46
SNX13-206ENST00000474067 LGALS3P17931 250 aaKnown RBP12.19□□□□□ -0.46
SNX13-206ENST00000474067 MIEN1Q9BRT3 115 aa12.19□□□□□ -0.46
SNX13-206ENST00000474067 SCO1O75880 301 aa12.18□□□□□ -0.46
SNX13-206ENST00000474067 J3QQQ9 107 aa12.17□□□□□ -0.46
SNX13-206ENST00000474067 PRYO14603 147 aa12.17□□□□□ -0.46
SNX13-206ENST00000474067 LINC00310P59036 64 aa12.17□□□□□ -0.46
SNX13-206ENST00000474067 PRLHP81277 87 aa12.16□□□□□ -0.46
SNX13-206ENST00000474067 TMEM238C9JI98 176 aa12.15□□□□□ -0.46
SNX13-206ENST00000474067 ZNF706Q9Y5V0 76 aaPredicted RBP12.15□□□□□ -0.46
SNX13-206ENST00000474067 CTAG1AP78358 180 aa12.13□□□□□ -0.47
SNX13-206ENST00000474067 A0A087X002 238 aa12.12□□□□□ -0.47
SNX13-206ENST00000474067 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
SNX13-206ENST00000474067 HIGD2AQ9BW72 106 aa12.11□□□□□ -0.47
SNX13-206ENST00000474067 LOC107984156A0A0G2JMH3 177 aa12.1□□□□□ -0.47
SNX13-206ENST00000474067 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
SNX13-206ENST00000474067 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
SNX13-206ENST00000474067 ARL17AQ8IVW1 177 aa12.1□□□□□ -0.47
SNX13-206ENST00000474067 Q8NDZ9 215 aa12.1□□□□□ -0.47
SNX13-206ENST00000474067 CBY1Q9Y3M2 126 aa12.1□□□□□ -0.47
SNX13-206ENST00000474067 NCR3O14931 201 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BKO60814 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BJP06899 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BOP23527 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BBP33778 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BDP58876 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BCP62807 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 PRR4Q16378 134 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST2H2BEQ16778 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BHQ93079 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BNQ99877 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 HIST1H2BMQ99879 126 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 KCNQ1DNQ9H478 68 aa12.09□□□□□ -0.47
SNX13-206ENST00000474067 E9PLD3 99 aa12.08□□□□□ -0.48
SNX13-206ENST00000474067 PMCHL2Q9BQD1 86 aa12.08□□□□□ -0.48
SNX13-206ENST00000474067 SYS1-DBNDD2H3BUS1 97 aa12.07□□□□□ -0.48
SNX13-206ENST00000474067 NDUFC2O95298 119 aa12.07□□□□□ -0.48
SNX13-206ENST00000474067 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
SNX13-206ENST00000474067 SPANXB1Q9NS25 103 aaPredicted RBP12.07□□□□□ -0.48
SNX13-206ENST00000474067 PET117Q6UWS5 81 aa12.06□□□□□ -0.48
SNX13-206ENST00000474067 SPRR1AP35321 89 aa12.05□□□□□ -0.48
SNX13-206ENST00000474067 LINC00304Q8N9R0 145 aa12.05□□□□□ -0.48
SNX13-206ENST00000474067 UBR4Q5T4S7 5183 aa12.05□□□□□ -0.48
SNX13-206ENST00000474067 TSPAN13O95857 204 aa12.04□□□□□ -0.48
SNX13-206ENST00000474067 DDTP30046 118 aa12.04□□□□□ -0.48
SNX13-206ENST00000474067 S100A7L2Q5SY68 101 aa12.04□□□□□ -0.48
SNX13-206ENST00000474067 ANAPC11Q9NYG5 84 aa12.04□□□□□ -0.48
SNX13-206ENST00000474067 TRBV10-3A0A0K0K1G6 114 aa12.03□□□□□ -0.48
SNX13-206ENST00000474067 AKR1D1P51857 326 aa12.03□□□□□ -0.48
SNX13-206ENST00000474067 DAND5Q8N907 189 aa12.02□□□□□ -0.49
SNX13-206ENST00000474067 C20orf202A1L168 122 aa12.01□□□□□ -0.49
SNX13-206ENST00000474067 KRTAP13-2Q52LG2 175 aa12.01□□□□□ -0.49
SNX13-206ENST00000474067 LINC01545Q5VT33 79 aa12.01□□□□□ -0.49
SNX13-206ENST00000474067 SPAG11AQ6PDA7 123 aa12.01□□□□□ -0.49
SNX13-206ENST00000474067 SPRR4Q96PI1 79 aa12.01□□□□□ -0.49
SNX13-206ENST00000474067 JOSD1Q15040 202 aaPredicted RBP12□□□□□ -0.49
SNX13-206ENST00000474067 A0A0J9YXY3 114 aa11.99□□□□□ -0.49
SNX13-206ENST00000474067 HINT1P49773 126 aaPredicted RBP11.99□□□□□ -0.49
SNX13-206ENST00000474067 TIMM17BO60830 172 aa11.98□□□□□ -0.49
SNX13-206ENST00000474067 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
SNX13-206ENST00000474067 LRP2P98164 4655 aa11.97□□□□□ -0.49
SNX13-206ENST00000474067 COA6Q5JTJ3 125 aaKnown RBP11.97□□□□□ -0.49
SNX13-206ENST00000474067 KRTAP4-16G5E9R7 235 aaPredicted RBP11.96□□□□□ -0.49
SNX13-206ENST00000474067 SMCR5Q8TEV8 140 aa11.96□□□□□ -0.49
SNX13-206ENST00000474067 COPS9Q8WXC6 57 aa11.96□□□□□ -0.49
SNX13-206ENST00000474067 TRAV23DV6A0A075B6W5 121 aa11.94□□□□□ -0.5
SNX13-206ENST00000474067 IGLV6-57P01721 117 aa11.94□□□□□ -0.5
SNX13-206ENST00000474067 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
SNX13-206ENST00000474067 ZNF815PA8K554 130 aa11.93□□□□□ -0.5
SNX13-206ENST00000474067 B5MCH6 92 aa11.93□□□□□ -0.5
SNX13-206ENST00000474067 KRTDAPP60985 99 aa11.93□□□□□ -0.5
SNX13-206ENST00000474067 Q6ZRX8 168 aa11.93□□□□□ -0.5
SNX13-206ENST00000474067 C3orf79P0CE67 100 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 195.4 ms