RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
SMARCD3-208ENST00000472789 ADAMTSL4-AS1Q5T5F5 129 aa6.85□□□□□ -1.31
SMARCD3-208ENST00000472789 Q6ZRU5 148 aa6.85□□□□□ -1.31
SMARCD3-208ENST00000472789 MIR7-3HGQ8N6C7 128 aa6.85□□□□□ -1.31
SMARCD3-208ENST00000472789 LITAFQ99732 161 aa6.85□□□□□ -1.31
SMARCD3-208ENST00000472789 C6orf48Q9UBA6 75 aa6.85□□□□□ -1.31
SMARCD3-208ENST00000472789 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
SMARCD3-208ENST00000472789 BVES-AS1Q5T3Y7 98 aa6.84□□□□□ -1.31
SMARCD3-208ENST00000472789 C10orf25Q5T742 122 aa6.84□□□□□ -1.31
SMARCD3-208ENST00000472789 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.31
SMARCD3-208ENST00000472789 LINC00308Q8TCZ7 52 aa6.84□□□□□ -1.31
SMARCD3-208ENST00000472789 FAT1Q14517 4588 aa6.84□□□□□ -1.31
SMARCD3-208ENST00000472789 BATFQ16520 125 aa6.83□□□□□ -1.32
SMARCD3-208ENST00000472789 LOC107984640A0A0U1RRK4 108 aa6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 CDK2AP2O75956 126 aa6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 TLX1NBP0CAT3 122 aa6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 HAMPP81172 84 aa6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 LBHQ53QV2 105 aaPredicted RBP6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 C9orf116Q5BN46 136 aaPredicted RBP6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 DAND5Q8N907 189 aa6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 MYCBP2O75592 4640 aa6.82□□□□□ -1.32
SMARCD3-208ENST00000472789 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
SMARCD3-208ENST00000472789 SLPIP03973 132 aa6.81□□□□□ -1.32
SMARCD3-208ENST00000472789 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
SMARCD3-208ENST00000472789 C9orf163Q8N9P6 203 aa6.81□□□□□ -1.32
SMARCD3-208ENST00000472789 SRRM2Q9UQ35 2752 aaKnown RBP6.81□□□□□ -1.32
SMARCD3-208ENST00000472789 DMBT1Q9UGM3 2413 aaPredicted RBP6.81□□□□□ -1.32
SMARCD3-208ENST00000472789 A4D1N5 150 aa6.8□□□□□ -1.32
SMARCD3-208ENST00000472789 NPC2P61916 151 aa6.8□□□□□ -1.32
SMARCD3-208ENST00000472789 RPL18AQ02543 176 aaKnown RBP6.8□□□□□ -1.32
SMARCD3-208ENST00000472789 COL5A1-AS1Q5SY13 56 aa6.8□□□□□ -1.32
SMARCD3-208ENST00000472789 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
SMARCD3-208ENST00000472789 SND1-IT1Q9HBX3 110 aa6.8□□□□□ -1.32
SMARCD3-208ENST00000472789 FAM30AQ9NZY2 134 aa6.8□□□□□ -1.32
SMARCD3-208ENST00000472789 NDUFC2O95298 119 aa6.79□□□□□ -1.32
SMARCD3-208ENST00000472789 FXYD2P54710 66 aa6.79□□□□□ -1.32
SMARCD3-208ENST00000472789 DPH3Q96FX2 82 aa6.79□□□□□ -1.32
SMARCD3-208ENST00000472789 SNHG12Q9BXW3 62 aa6.79□□□□□ -1.32
SMARCD3-208ENST00000472789 NHP2Q9NX24 153 aaKnown RBP6.79□□□□□ -1.32
SMARCD3-208ENST00000472789 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
SMARCD3-208ENST00000472789 TRAV13-2A0A0B4J235 113 aa6.78□□□□□ -1.32
SMARCD3-208ENST00000472789 GAGE2EQ4V326 116 aa6.78□□□□□ -1.32
SMARCD3-208ENST00000472789 GAGE2DQ9UEU5 116 aa6.78□□□□□ -1.32
SMARCD3-208ENST00000472789 A0A0B4J2C4 111 aa6.77□□□□□ -1.33
SMARCD3-208ENST00000472789 XGP55808 180 aa6.77□□□□□ -1.33
SMARCD3-208ENST00000472789 SDIM1Q6ZPB5 146 aa6.77□□□□□ -1.33
SMARCD3-208ENST00000472789 Q6ZRP5 223 aa6.77□□□□□ -1.33
SMARCD3-208ENST00000472789 PRO1854Q9UHT4 67 aa6.77□□□□□ -1.33
SMARCD3-208ENST00000472789 CBY1Q9Y3M2 126 aa6.77□□□□□ -1.33
SMARCD3-208ENST00000472789 IGKV2-24A0A0C4DH68 120 aa6.76□□□□□ -1.33
SMARCD3-208ENST00000472789 CFC1BP0CG36 223 aa6.76□□□□□ -1.33
SMARCD3-208ENST00000472789 CFC1P0CG37 223 aa6.76□□□□□ -1.33
SMARCD3-208ENST00000472789 GAGE2BQ13066 116 aa6.76□□□□□ -1.33
SMARCD3-208ENST00000472789 SOSTDC1Q6X4U4 206 aa6.76□□□□□ -1.33
SMARCD3-208ENST00000472789 XAGE1AQ9HD64 81 aa6.76□□□□□ -1.33
SMARCD3-208ENST00000472789 TRBV10-2A0A0K0K1G8 114 aa6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 A0A1B0GWB2 263 aa6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 SMR3BP02814 79 aaPredicted RBP6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 CHTF8P0CG12 524 aa6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 Q6ZSA8 131 aa6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 SCXQ7RTU7 201 aa6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 PLA2G2DQ9UNK4 145 aa6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.75□□□□□ -1.33
SMARCD3-208ENST00000472789 S100A7L2Q5SY68 101 aa6.74□□□□□ -1.33
SMARCD3-208ENST00000472789 Q8N1X5 172 aa6.74□□□□□ -1.33
SMARCD3-208ENST00000472789 NKAPP1Q8N9T2 125 aa6.74□□□□□ -1.33
SMARCD3-208ENST00000472789 TMEM126AQ9H061 195 aa6.74□□□□□ -1.33
SMARCD3-208ENST00000472789 VPS13BQ7Z7G8 4022 aa6.73□□□□□ -1.33
SMARCD3-208ENST00000472789 A0A096LNI7 61 aa6.73□□□□□ -1.33
SMARCD3-208ENST00000472789 PANO1I0J062 215 aa6.73□□□□□ -1.33
SMARCD3-208ENST00000472789 Q1RN00 199 aa6.73□□□□□ -1.33
SMARCD3-208ENST00000472789 OR13C6PQ8NH95 151 aa6.73□□□□□ -1.33
SMARCD3-208ENST00000472789 CIRBP-AS1Q8TBR5 109 aa6.73□□□□□ -1.33
SMARCD3-208ENST00000472789 M0R378 163 aa6.72□□□□□ -1.33
SMARCD3-208ENST00000472789 EIF4EBP3O60516 100 aaPredicted RBP6.72□□□□□ -1.33
SMARCD3-208ENST00000472789 COX6CP09669 75 aa6.71□□□□□ -1.34
SMARCD3-208ENST00000472789 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
SMARCD3-208ENST00000472789 LYRM7Q5U5X0 104 aa6.71□□□□□ -1.34
SMARCD3-208ENST00000472789 SPACA4Q8TDM5 124 aa6.71□□□□□ -1.34
SMARCD3-208ENST00000472789 A0A087WYN8 130 aa6.7□□□□□ -1.34
SMARCD3-208ENST00000472789 EPM2AB3EWF7 344 aa6.7□□□□□ -1.34
SMARCD3-208ENST00000472789 K7ERJ3 54 aa6.7□□□□□ -1.34
SMARCD3-208ENST00000472789 RPL13AP40429 203 aaKnown RBP6.7□□□□□ -1.34
SMARCD3-208ENST00000472789 PSMB2P49721 201 aa6.7□□□□□ -1.34
SMARCD3-208ENST00000472789 IGLV5-37A0A075B6J1 123 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 IGKV2-28A0A075B6P5 120 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 C9orf118A6NHY6 69 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 FAM229AH3BQW9 127 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 H7C2G1 150 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 NCR3O14931 201 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 IGKV2D-28P01615 120 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 VPREB1P12018 145 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 Q5VSD8 79 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 LINC00528Q8N1L1 170 aa6.69□□□□□ -1.34
SMARCD3-208ENST00000472789 TAX1BP3O14907 124 aa6.68□□□□□ -1.34
SMARCD3-208ENST00000472789 SCGB1C2P0DMR2 95 aa6.68□□□□□ -1.34
SMARCD3-208ENST00000472789 PRR3P79522 188 aaKnown RBP6.68□□□□□ -1.34
SMARCD3-208ENST00000472789 VAMP3Q15836 100 aa6.68□□□□□ -1.34
SMARCD3-208ENST00000472789 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
SMARCD3-208ENST00000472789 H3BUT2 72 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms