RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 Q86TA4 180 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 LINC00269Q8N2A0 174 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 ANKRD29Q8N6D5 301 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 DAND5Q8N907 189 aa2.83□□□□□ -1.96
CKS1B-204ENST00000471245 MUC21A0A140T8X8 626 aa2.82□□□□□ -1.96
CKS1B-204ENST00000471245 DEFA3P59666 94 aa2.82□□□□□ -1.96
CKS1B-204ENST00000471245 OR10AG1Q8NH19 301 aa2.82□□□□□ -1.96
CKS1B-204ENST00000471245 CCDC32Q9BV29 185 aa2.82□□□□□ -1.96
CKS1B-204ENST00000471245 ZNF471Q9BX82 626 aaPredicted RBP2.82□□□□□ -1.96
CKS1B-204ENST00000471245 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.81□□□□□ -1.96
CKS1B-204ENST00000471245 A0A1W2PRE2 83 aa2.81□□□□□ -1.96
CKS1B-204ENST00000471245 SRP19P09132 144 aaKnown RBP2.81□□□□□ -1.96
CKS1B-204ENST00000471245 RAB5CP51148 216 aa2.81□□□□□ -1.96
CKS1B-204ENST00000471245 RAB4BP61018 213 aa2.81□□□□□ -1.96
CKS1B-204ENST00000471245 COX6A2Q02221 97 aa2.81□□□□□ -1.96
CKS1B-204ENST00000471245 Q5BKY6 102 aa2.81□□□□□ -1.96
CKS1B-204ENST00000471245 PSORS1C2Q9UIG4 136 aa2.81□□□□□ -1.96
CKS1B-204ENST00000471245 TRBV20OR9-2A0A075B6H5 130 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 A0A096LNI7 61 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 TRBV6-1A0A0K0K1D8 114 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 C19orf71A6NCJ1 209 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 IGLV6-57P01721 117 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 TPT1P13693 172 aaKnown RBP2.8□□□□□ -1.96
CKS1B-204ENST00000471245 IQCJQ1A5X6 159 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 SMIM15Q7Z3B0 74 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 PSMG3Q9BT73 122 aaPredicted RBP2.8□□□□□ -1.96
CKS1B-204ENST00000471245 DERL1Q9BUN8 251 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 TMEM167BQ9NRX6 74 aa2.8□□□□□ -1.96
CKS1B-204ENST00000471245 M0QY20 66 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 IFNA7P01567 189 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 ZNF56Q15929 161 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 SMIM20Q8N5G0 67 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 XAGE1AQ9HD64 81 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 BIN3Q9NQY0 253 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 TNFSF18Q9UNG2 199 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 ZFP30Q9Y2G7 519 aa2.79□□□□□ -1.96
CKS1B-204ENST00000471245 TRBV25-1A0A075B6N4 114 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 CTXND1A0A1B0GTU2 59 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 A0A1B0GV72 72 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 A0A1W2PNN7 141 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 GZMBP10144 247 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 CCL20P78556 96 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 SERF2P84101 59 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 RPL7L1Q6DKI1 246 aaKnown RBP2.78□□□□□ -1.96
CKS1B-204ENST00000471245 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 LINC00526Q96FQ7 95 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 AQP10Q96PS8 301 aa2.78□□□□□ -1.96
CKS1B-204ENST00000471245 GVQW2A0A096LPI5 108 aaPredicted RBP2.77□□□□□ -1.97
CKS1B-204ENST00000471245 IGHV1-24A0A0C4DH33 117 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 G3V3Q6 166 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 UBE2L6O14933 153 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 CXCL1P09341 107 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 PKIAP61925 76 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 FAM229BQ4G0N7 80 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 OR13C6PQ8NH95 151 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 TOMM6Q96B49 74 aa2.77□□□□□ -1.97
CKS1B-204ENST00000471245 MAP1LC3B2A6NCE7 125 aa2.76□□□□□ -1.97
CKS1B-204ENST00000471245 NPYP01303 97 aa2.76□□□□□ -1.97
CKS1B-204ENST00000471245 P0C880 135 aa2.76□□□□□ -1.97
CKS1B-204ENST00000471245 IGLC6P0CF74 106 aa2.76□□□□□ -1.97
CKS1B-204ENST00000471245 ZNF22P17026 224 aaPredicted RBP2.76□□□□□ -1.97
CKS1B-204ENST00000471245 HIGD2AQ9BW72 106 aa2.76□□□□□ -1.97
CKS1B-204ENST00000471245 MAP1LC3BQ9GZQ8 125 aa2.76□□□□□ -1.97
CKS1B-204ENST00000471245 IGKV3OR2-268A0A0C4DH90 116 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 LOC105371267A0A1B0GV96 52 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 MGPP08493 103 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 AKR1C3P42330 323 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 DEFA1P59665 94 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 UBE2G1P62253 170 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 SPANXN1Q5VSR9 72 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 Q6Q795 121 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 LINC00299Q6ZSB3 139 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 S100ZQ8WXG8 99 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 AP1S3Q96PC3 154 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 LINC00474Q9P2X8 69 aa2.75□□□□□ -1.97
CKS1B-204ENST00000471245 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.74□□□□□ -1.97
CKS1B-204ENST00000471245 TRAV9-1A0A075B6T8 112 aa2.74□□□□□ -1.97
CKS1B-204ENST00000471245 IGKV2-29A2NJV5 120 aaPredicted RBP2.74□□□□□ -1.97
CKS1B-204ENST00000471245 C1orf137Q5JT78 98 aa2.74□□□□□ -1.97
CKS1B-204ENST00000471245 AKR1C8PQ5T2L2 129 aa2.74□□□□□ -1.97
CKS1B-204ENST00000471245 BAGE2Q86Y30 109 aa2.74□□□□□ -1.97
CKS1B-204ENST00000471245 DIRC1Q969H9 104 aa2.74□□□□□ -1.97
CKS1B-204ENST00000471245 RPL39LQ96EH5 51 aaKnown RBP2.74□□□□□ -1.97
CKS1B-204ENST00000471245 CYSLTR1Q9Y271 337 aa2.74□□□□□ -1.97
CKS1B-204ENST00000471245 H3BPC8 53 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 MT-ND6P03923 174 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 SMIM17P0DL12 118 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 BCL2P10415 239 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 RPL35P42766 123 aaKnown RBP2.73□□□□□ -1.97
CKS1B-204ENST00000471245 XCL1P47992 114 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 FOXA3P55318 350 aaPredicted RBP2.73□□□□□ -1.97
CKS1B-204ENST00000471245 LYZL1Q6UWQ5 148 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 C2orf91Q6ZV80 131 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 PHF5AQ7RTV0 110 aaKnown RBP2.73□□□□□ -1.97
CKS1B-204ENST00000471245 MBD3L1Q8WWY6 194 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 CARD19Q96LW7 228 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 TCEAL7Q9BRU2 100 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 TTTY13Q9BZ97 58 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 NIT2Q9NQR4 276 aa2.73□□□□□ -1.97
CKS1B-204ENST00000471245 TP73-AS1Q9UF72 201 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms