RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 COL5A1-AS1Q5SY13 56 aa7.8□□□□□ -1.16
SCNM1-205ENST00000471039 C2orf91Q6ZV80 131 aa7.8□□□□□ -1.16
SCNM1-205ENST00000471039 PCP2Q8IVA1 136 aa7.8□□□□□ -1.16
SCNM1-205ENST00000471039 RPL37AP61513 92 aaKnown RBP7.79□□□□□ -1.16
SCNM1-205ENST00000471039 BATFQ16520 125 aa7.79□□□□□ -1.16
SCNM1-205ENST00000471039 TMEM223A0PJW6 202 aa7.78□□□□□ -1.16
SCNM1-205ENST00000471039 HINT1P49773 126 aaPredicted RBP7.78□□□□□ -1.16
SCNM1-205ENST00000471039 HSD52Q0P140 79 aa7.78□□□□□ -1.16
SCNM1-205ENST00000471039 GAGE2EQ4V326 116 aa7.78□□□□□ -1.16
SCNM1-205ENST00000471039 GAGE2DQ9UEU5 116 aa7.78□□□□□ -1.16
SCNM1-205ENST00000471039 MYMXA0A1B0GTQ4 84 aa7.77□□□□□ -1.17
SCNM1-205ENST00000471039 A0A1W2PNN7 141 aa7.77□□□□□ -1.17
SCNM1-205ENST00000471039 C7orf33Q8WU49 177 aa7.77□□□□□ -1.17
SCNM1-205ENST00000471039 SRRM2Q9UQ35 2752 aaKnown RBP7.77□□□□□ -1.17
SCNM1-205ENST00000471039 FAM168BA1KXE4 195 aa7.76□□□□□ -1.17
SCNM1-205ENST00000471039 INAFM2P0DMQ5 153 aa7.76□□□□□ -1.17
SCNM1-205ENST00000471039 C9orf129Q5T035 196 aaKnown RBP7.76□□□□□ -1.17
SCNM1-205ENST00000471039 BVES-AS1Q5T3Y7 98 aa7.76□□□□□ -1.17
SCNM1-205ENST00000471039 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
SCNM1-205ENST00000471039 TP73-AS1Q9UF72 201 aa7.76□□□□□ -1.17
SCNM1-205ENST00000471039 LEPROTO15243 131 aa7.75□□□□□ -1.17
SCNM1-205ENST00000471039 TAL2Q16559 108 aa7.75□□□□□ -1.17
SCNM1-205ENST00000471039 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
SCNM1-205ENST00000471039 ZNF815PA8K554 130 aa7.74□□□□□ -1.17
SCNM1-205ENST00000471039 LGALS3P17931 250 aaKnown RBP7.74□□□□□ -1.17
SCNM1-205ENST00000471039 SFTA2Q6UW10 78 aa7.74□□□□□ -1.17
SCNM1-205ENST00000471039 KRTAP7-1Q8IUC3 87 aa7.74□□□□□ -1.17
SCNM1-205ENST00000471039 ZNF625Q96I27 306 aaPredicted RBP7.74□□□□□ -1.17
SCNM1-205ENST00000471039 J3QQQ9 107 aa7.73□□□□□ -1.17
SCNM1-205ENST00000471039 PRR3P79522 188 aaKnown RBP7.73□□□□□ -1.17
SCNM1-205ENST00000471039 PHF5AQ7RTV0 110 aaKnown RBP7.73□□□□□ -1.17
SCNM1-205ENST00000471039 TTTY13Q9BZ97 58 aa7.73□□□□□ -1.17
SCNM1-205ENST00000471039 XAGE1AQ9HD64 81 aa7.73□□□□□ -1.17
SCNM1-205ENST00000471039 A6NDN8 102 aa7.72□□□□□ -1.17
SCNM1-205ENST00000471039 M0QXV9 152 aa7.72□□□□□ -1.17
SCNM1-205ENST00000471039 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
SCNM1-205ENST00000471039 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
SCNM1-205ENST00000471039 A0A1B0GV90 55 aa7.71□□□□□ -1.18
SCNM1-205ENST00000471039 TSPEAR-AS2P59090 65 aa7.71□□□□□ -1.18
SCNM1-205ENST00000471039 SERTAD4-AS1Q5TG53 156 aa7.71□□□□□ -1.18
SCNM1-205ENST00000471039 SCGB1D4Q6XE38 83 aa7.71□□□□□ -1.18
SCNM1-205ENST00000471039 PFN2P35080 140 aa7.7□□□□□ -1.18
SCNM1-205ENST00000471039 COX17Q14061 63 aa7.69□□□□□ -1.18
SCNM1-205ENST00000471039 CEND1Q8N111 149 aa7.69□□□□□ -1.18
SCNM1-205ENST00000471039 HIST1H4GQ99525 98 aa7.69□□□□□ -1.18
SCNM1-205ENST00000471039 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
SCNM1-205ENST00000471039 NDUFA12Q9UI09 145 aa7.68□□□□□ -1.18
SCNM1-205ENST00000471039 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
SCNM1-205ENST00000471039 HERV-K104P63124 156 aa7.67□□□□□ -1.18
SCNM1-205ENST00000471039 KRTAP11-1Q8IUC1 163 aa7.67□□□□□ -1.18
SCNM1-205ENST00000471039 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
SCNM1-205ENST00000471039 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
SCNM1-205ENST00000471039 PLA2G2DQ9UNK4 145 aa7.67□□□□□ -1.18
SCNM1-205ENST00000471039 TMEM238LA0A1B0GVL6 79 aa7.66□□□□□ -1.18
SCNM1-205ENST00000471039 A6NJY4 79 aa7.66□□□□□ -1.18
SCNM1-205ENST00000471039 SRSF9Q13242 221 aaKnown RBP eCLIP7.66□□□□□ -1.18
SCNM1-205ENST00000471039 FLG2Q5D862 2391 aaPredicted RBP7.66□□□□□ -1.18
SCNM1-205ENST00000471039 IGLV5-37A0A075B6J1 123 aa7.65□□□□□ -1.18
SCNM1-205ENST00000471039 TAX1BP3O14907 124 aa7.65□□□□□ -1.18
SCNM1-205ENST00000471039 SMIM13P0DJ93 91 aa7.65□□□□□ -1.18
SCNM1-205ENST00000471039 FXYD2P54710 66 aa7.65□□□□□ -1.18
SCNM1-205ENST00000471039 UBE2BP63146 152 aa7.65□□□□□ -1.18
SCNM1-205ENST00000471039 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
SCNM1-205ENST00000471039 C22orf24Q9Y442 160 aa7.65□□□□□ -1.18
SCNM1-205ENST00000471039 A0A0U1RRA0 63 aa7.64□□□□□ -1.19
SCNM1-205ENST00000471039 TMEM238C9JI98 176 aa7.64□□□□□ -1.19
SCNM1-205ENST00000471039 TIMM17BO60830 172 aa7.64□□□□□ -1.19
SCNM1-205ENST00000471039 LINC00158P58513 81 aa7.64□□□□□ -1.19
SCNM1-205ENST00000471039 MRPL55Q7Z7F7 128 aaKnown RBP7.64□□□□□ -1.19
SCNM1-205ENST00000471039 LRP1Q07954 4544 aaKnown RBP7.63□□□□□ -1.19
SCNM1-205ENST00000471039 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
SCNM1-205ENST00000471039 VPREB1P12018 145 aa7.63□□□□□ -1.19
SCNM1-205ENST00000471039 C1orf137Q5JT78 98 aa7.63□□□□□ -1.19
SCNM1-205ENST00000471039 Q6ZVH6 145 aa7.63□□□□□ -1.19
SCNM1-205ENST00000471039 Q8NDZ9 215 aa7.63□□□□□ -1.19
SCNM1-205ENST00000471039 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
SCNM1-205ENST00000471039 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
SCNM1-205ENST00000471039 A0A1B0GWB2 263 aa7.61□□□□□ -1.19
SCNM1-205ENST00000471039 C9orf118A6NHY6 69 aa7.61□□□□□ -1.19
SCNM1-205ENST00000471039 NHP2Q9NX24 153 aaKnown RBP7.61□□□□□ -1.19
SCNM1-205ENST00000471039 KRTAP29-1A8MX34 341 aaPredicted RBP7.6□□□□□ -1.19
SCNM1-205ENST00000471039 LINC00167Q96N53 147 aa7.6□□□□□ -1.19
SCNM1-205ENST00000471039 SPANXDQ9BXN6 97 aa7.6□□□□□ -1.19
SCNM1-205ENST00000471039 SPANXCQ9NY87 97 aa7.6□□□□□ -1.19
SCNM1-205ENST00000471039 GAGE10A6NGK3 116 aa7.59□□□□□ -1.19
SCNM1-205ENST00000471039 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
SCNM1-205ENST00000471039 RPL24P83731 157 aaKnown RBP7.59□□□□□ -1.19
SCNM1-205ENST00000471039 SPINK6Q6UWN8 80 aa7.59□□□□□ -1.19
SCNM1-205ENST00000471039 COPS9Q8WXC6 57 aa7.59□□□□□ -1.19
SCNM1-205ENST00000471039 RPL37AP8A6NKH3 93 aa7.58□□□□□ -1.2
SCNM1-205ENST00000471039 OXTP01178 125 aa7.58□□□□□ -1.2
SCNM1-205ENST00000471039 IFITM1P13164 125 aa7.58□□□□□ -1.2
SCNM1-205ENST00000471039 VAMP3Q15836 100 aa7.58□□□□□ -1.2
SCNM1-205ENST00000471039 DAND5Q8N907 189 aa7.58□□□□□ -1.2
SCNM1-205ENST00000471039 LITAFQ99732 161 aa7.58□□□□□ -1.2
SCNM1-205ENST00000471039 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
SCNM1-205ENST00000471039 IGKV2-28A0A075B6P5 120 aa7.56□□□□□ -1.2
SCNM1-205ENST00000471039 H3BUT2 72 aa7.56□□□□□ -1.2
SCNM1-205ENST00000471039 IGKV2D-28P01615 120 aa7.56□□□□□ -1.2
SCNM1-205ENST00000471039 PPDPFQ9H3Y8 114 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms