RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 LRCOL1A6NCL2 159 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 C11orf86A6NJI1 115 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 IBA57-AS1B1ANH7 110 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 PPP1R17O96001 155 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 SPINK8P0C7L1 97 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 C3orf79P0CE67 100 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 UBE2D1P51668 147 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 TSPEAR-AS2P59090 65 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 KRTDAPP60985 99 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 ORMDL2Q53FV1 153 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 COA6Q5JTJ3 125 aaKnown RBP2.33□□□□□ -2.04
COL9A1-206ENST00000470652 MRPL52Q86TS9 123 aaKnown RBP2.33□□□□□ -2.04
COL9A1-206ENST00000470652 C15orf56Q8N910 161 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 IFI27L1Q96BM0 104 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 CHCHD1Q96BP2 118 aaKnown RBP2.33□□□□□ -2.04
COL9A1-206ENST00000470652 TMEM141Q96I45 108 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 AMELXQ99217 191 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 TTTY13Q9BZ97 58 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 CST9LQ9H4G1 147 aa2.33□□□□□ -2.04
COL9A1-206ENST00000470652 MRPL35Q9NZE8 188 aaKnown RBP2.33□□□□□ -2.04
COL9A1-206ENST00000470652 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 LEPROTL1O95214 131 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 CRPP02741 224 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 ZNF22P17026 224 aaPredicted RBP2.32□□□□□ -2.04
COL9A1-206ENST00000470652 MRPS36P82909 103 aaKnown RBP2.32□□□□□ -2.04
COL9A1-206ENST00000470652 C1orf134Q5TEV5 83 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 C2orf82Q6UX34 121 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 TEX43Q6ZNM6 134 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 OR10D4PQ8NGN7 298 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 CHAC1Q9BUX1 264 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 SPANXA1Q9NS26 97 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 CDKN2A-AS1Q9UH64 79 aa2.32□□□□□ -2.04
COL9A1-206ENST00000470652 A0A087WTM6 91 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 IGKV2D-26A0A0A0MRZ7 120 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 IGHV3OR16-9A0A0B4J2B5 98 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 LOC105371267A0A1B0GV96 52 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.31□□□□□ -2.04
COL9A1-206ENST00000470652 SYS1-DBNDD2H3BUS1 97 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 CHTF8P0CG12 524 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 ZNF25P17030 456 aaPredicted RBP2.31□□□□□ -2.04
COL9A1-206ENST00000470652 PMVKQ15126 192 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 C9orf116Q5BN46 136 aaPredicted RBP2.31□□□□□ -2.04
COL9A1-206ENST00000470652 Q6ZN92 141 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 LINC00469Q8N7U9 141 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 PACRGQ96M98 296 aaPredicted RBP2.31□□□□□ -2.04
COL9A1-206ENST00000470652 TIMM17AQ99595 171 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 TIMM21Q9BVV7 248 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 VCX2Q9H322 139 aa2.31□□□□□ -2.04
COL9A1-206ENST00000470652 CHTOPQ9Y3Y2 248 aaKnown RBP2.31□□□□□ -2.04
COL9A1-206ENST00000470652 HERC2O95714 4834 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 PSCAO43653 123 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 ATP5LO75964 103 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 S100A6P06703 90 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 IGLC3P0DOY3 106 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 S100A2P29034 98 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 SS18Q15532 418 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 TMEM170BQ5T4T1 132 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 ORAOV1Q8WV07 137 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 ZNF625Q96I27 306 aaPredicted RBP2.3□□□□□ -2.04
COL9A1-206ENST00000470652 TOMM7Q9P0U1 55 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 CSDC2Q9Y534 153 aaKnown RBP2.3□□□□□ -2.04
COL9A1-206ENST00000470652 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
COL9A1-206ENST00000470652 F8VRH5 84 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 F8WDY8 70 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 K7EMI3 77 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 COX7A2LO14548 114 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 AKR1D1P51857 326 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 SPAG11BQ08648 103 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 KIAA0087Q14695 138 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 MIAQ16674 131 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 TTC32Q5I0X7 151 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 PYY3Q5JQD4 70 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 LINC01545Q5VT33 79 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 UNQ6190/PRO20217Q6UXQ8 127 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 Q6ZRU5 148 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 PCP2Q8IVA1 136 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 C10orf126Q8N4M7 172 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 Q8N814 137 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 Q8NDZ9 215 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 PLEKHB2Q96CS7 222 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 C2orf88Q9BSF0 95 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 MAP1LC3CQ9BXW4 147 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 GEMIN7Q9H840 131 aaKnown RBP2.29□□□□□ -2.04
COL9A1-206ENST00000470652 HSPB8Q9UJY1 196 aa2.29□□□□□ -2.04
COL9A1-206ENST00000470652 GVQW2A0A096LPI5 108 aaPredicted RBP2.28□□□□□ -2.04
COL9A1-206ENST00000470652 TRAV12-1A0A0B4J245 112 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 TINCRA0A1B0GVN0 87 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 TMEM223A0PJW6 202 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 DPM2O94777 84 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 IGKCP01834 107 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 FAM19A3Q7Z5A8 133 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 CAMK2N1Q7Z7J9 78 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 DAND5Q8N907 189 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 C6orf48Q9UBA6 75 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 VPS13BQ7Z7G8 4022 aa2.28□□□□□ -2.04
COL9A1-206ENST00000470652 A0A096LNI7 61 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 TRAV8-4A0A0B4J246 113 aa2.27□□□□□ -2.05
COL9A1-206ENST00000470652 IGHV1-58A0A0C4DH39 117 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms