RNA–Protein interactions for RNA: ENST00000469017.6

SPIN1-203, Transcript of spindlin 1, humanhuman

TSL 2

Gene SPIN1, Length 2,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-203ENST00000469017 TSTD3H0UI37 97 aa12.87□□□□□ -0.35
SPIN1-203ENST00000469017 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPIN1-203ENST00000469017 HNRNPA3P51991 378 aaKnown RBP12.86□□□□□ -0.35
SPIN1-203ENST00000469017 MUSTN1Q8IVN3 82 aa12.85□□□□□ -0.35
SPIN1-203ENST00000469017 LINC00308Q8TCZ7 52 aa12.85□□□□□ -0.35
SPIN1-203ENST00000469017 HIST1H4GQ99525 98 aa12.85□□□□□ -0.35
SPIN1-203ENST00000469017 SPANXDQ9BXN6 97 aa12.85□□□□□ -0.35
SPIN1-203ENST00000469017 SPANXCQ9NY87 97 aa12.85□□□□□ -0.35
SPIN1-203ENST00000469017 HIGD1BQ9P298 99 aa12.85□□□□□ -0.35
SPIN1-203ENST00000469017 PRR3P79522 188 aaKnown RBP12.84□□□□□ -0.35
SPIN1-203ENST00000469017 DPH3Q96FX2 82 aa12.84□□□□□ -0.35
SPIN1-203ENST00000469017 SERTAD4-AS1Q5TG53 156 aa12.84□□□□□ -0.35
SPIN1-203ENST00000469017 SPANXB1Q9NS25 103 aaPredicted RBP12.84□□□□□ -0.35
SPIN1-203ENST00000469017 A0A1W2PNN7 141 aa12.83□□□□□ -0.36
SPIN1-203ENST00000469017 KRTAP7-1Q8IUC3 87 aa12.83□□□□□ -0.36
SPIN1-203ENST00000469017 FAM19A5Q7Z5A7 132 aaPredicted RBP12.82□□□□□ -0.36
SPIN1-203ENST00000469017 SPACA4Q8TDM5 124 aa12.82□□□□□ -0.36
SPIN1-203ENST00000469017 APOBP04114 4563 aaKnown RBP12.81□□□□□ -0.36
SPIN1-203ENST00000469017 CTAG1AP78358 180 aa12.81□□□□□ -0.36
SPIN1-203ENST00000469017 PCP4L1A6NKN8 68 aa12.8□□□□□ -0.36
SPIN1-203ENST00000469017 A0A087WYN8 130 aa12.78□□□□□ -0.36
SPIN1-203ENST00000469017 DDTP30046 118 aa12.77□□□□□ -0.36
SPIN1-203ENST00000469017 NCR3O14931 201 aa12.77□□□□□ -0.37
SPIN1-203ENST00000469017 Q6ZVH6 145 aa12.76□□□□□ -0.37
SPIN1-203ENST00000469017 VPREB1P12018 145 aa12.76□□□□□ -0.37
SPIN1-203ENST00000469017 FXYD2P54710 66 aa12.76□□□□□ -0.37
SPIN1-203ENST00000469017 Q6ZSA8 131 aa12.76□□□□□ -0.37
SPIN1-203ENST00000469017 CEND1Q8N111 149 aa12.76□□□□□ -0.37
SPIN1-203ENST00000469017 LOC107984156A0A0G2JMH3 177 aa12.75□□□□□ -0.37
SPIN1-203ENST00000469017 A4D1N5 150 aa12.75□□□□□ -0.37
SPIN1-203ENST00000469017 ARL17AQ8IVW1 177 aa12.75□□□□□ -0.37
SPIN1-203ENST00000469017 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
SPIN1-203ENST00000469017 IFITM1P13164 125 aa12.74□□□□□ -0.37
SPIN1-203ENST00000469017 HSD52Q0P140 79 aa12.74□□□□□ -0.37
SPIN1-203ENST00000469017 LINC00474Q9P2X8 69 aa12.74□□□□□ -0.37
SPIN1-203ENST00000469017 GAGE10A6NGK3 116 aa12.74□□□□□ -0.37
SPIN1-203ENST00000469017 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
SPIN1-203ENST00000469017 CIRBP-AS1Q8TBR5 109 aa12.74□□□□□ -0.37
SPIN1-203ENST00000469017 HINT1P49773 126 aaPredicted RBP12.73□□□□□ -0.37
SPIN1-203ENST00000469017 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
SPIN1-203ENST00000469017 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
SPIN1-203ENST00000469017 PHF5AQ7RTV0 110 aaKnown RBP12.72□□□□□ -0.37
SPIN1-203ENST00000469017 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
SPIN1-203ENST00000469017 M0QXV9 152 aa12.71□□□□□ -0.38
SPIN1-203ENST00000469017 TAL2Q16559 108 aa12.71□□□□□ -0.38
SPIN1-203ENST00000469017 RPL24P83731 157 aaKnown RBP12.69□□□□□ -0.38
SPIN1-203ENST00000469017 NKAPP1Q8N9T2 125 aa12.69□□□□□ -0.38
SPIN1-203ENST00000469017 PLAC8Q9NZF1 115 aa12.69□□□□□ -0.38
SPIN1-203ENST00000469017 PLA2G2DQ9UNK4 145 aa12.69□□□□□ -0.38
SPIN1-203ENST00000469017 RPL37AP8A6NKH3 93 aa12.68□□□□□ -0.38
SPIN1-203ENST00000469017 LINC00337Q8N6G1 96 aa12.68□□□□□ -0.38
SPIN1-203ENST00000469017 XGP55808 180 aa12.68□□□□□ -0.38
SPIN1-203ENST00000469017 BVES-AS1Q5T3Y7 98 aa12.68□□□□□ -0.38
SPIN1-203ENST00000469017 C7orf33Q8WU49 177 aa12.68□□□□□ -0.38
SPIN1-203ENST00000469017 KRTAP11-1Q8IUC1 163 aa12.67□□□□□ -0.38
SPIN1-203ENST00000469017 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
SPIN1-203ENST00000469017 NDUFC2O95298 119 aa12.66□□□□□ -0.38
SPIN1-203ENST00000469017 BATFQ16520 125 aa12.66□□□□□ -0.38
SPIN1-203ENST00000469017 K7ERJ3 54 aa12.66□□□□□ -0.38
SPIN1-203ENST00000469017 CFC1BP0CG36 223 aa12.66□□□□□ -0.38
SPIN1-203ENST00000469017 CFC1P0CG37 223 aa12.66□□□□□ -0.38
SPIN1-203ENST00000469017 MRPL55Q7Z7F7 128 aaKnown RBP12.66□□□□□ -0.38
SPIN1-203ENST00000469017 LINC00167Q96N53 147 aa12.66□□□□□ -0.38
SPIN1-203ENST00000469017 NHP2Q9NX24 153 aaKnown RBP12.65□□□□□ -0.38
SPIN1-203ENST00000469017 OR13C6PQ8NH95 151 aa12.65□□□□□ -0.39
SPIN1-203ENST00000469017 IGLV5-37A0A075B6J1 123 aa12.64□□□□□ -0.39
SPIN1-203ENST00000469017 KIAA1109Q2LD37 5005 aa12.64□□□□□ -0.39
SPIN1-203ENST00000469017 HSPG2P98160 4391 aa12.64□□□□□ -0.39
SPIN1-203ENST00000469017 FAT1Q14517 4588 aa12.63□□□□□ -0.39
SPIN1-203ENST00000469017 TRBV10-3A0A0K0K1G6 114 aa12.63□□□□□ -0.39
SPIN1-203ENST00000469017 A6NDN8 102 aa12.63□□□□□ -0.39
SPIN1-203ENST00000469017 EPM2AB3EWF7 344 aa12.63□□□□□ -0.39
SPIN1-203ENST00000469017 M0R378 163 aa12.63□□□□□ -0.39
SPIN1-203ENST00000469017 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
SPIN1-203ENST00000469017 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
SPIN1-203ENST00000469017 S100A7L2Q5SY68 101 aa12.61□□□□□ -0.39
SPIN1-203ENST00000469017 RYR1P21817 5038 aa12.61□□□□□ -0.39
SPIN1-203ENST00000469017 VPS13BQ7Z7G8 4022 aa12.61□□□□□ -0.39
SPIN1-203ENST00000469017 TMEM238LA0A1B0GVL6 79 aa12.6□□□□□ -0.39
SPIN1-203ENST00000469017 A6NJY4 79 aa12.6□□□□□ -0.39
SPIN1-203ENST00000469017 H7C2G1 150 aa12.6□□□□□ -0.39
SPIN1-203ENST00000469017 UBE2BP63146 152 aa12.6□□□□□ -0.39
SPIN1-203ENST00000469017 TRBV10-2A0A0K0K1G8 114 aa12.58□□□□□ -0.39
SPIN1-203ENST00000469017 M0R143 59 aa12.58□□□□□ -0.39
SPIN1-203ENST00000469017 RAB37Q96AX2 223 aa12.58□□□□□ -0.39
SPIN1-203ENST00000469017 IGLV1-50A0A075B6I6 118 aa12.57□□□□□ -0.4
SPIN1-203ENST00000469017 RPL13AP40429 203 aaKnown RBP12.57□□□□□ -0.4
SPIN1-203ENST00000469017 SNHG12Q9BXW3 62 aa12.57□□□□□ -0.4
SPIN1-203ENST00000469017 IGLV6-57P01721 117 aa12.57□□□□□ -0.4
SPIN1-203ENST00000469017 LBHQ53QV2 105 aaPredicted RBP12.56□□□□□ -0.4
SPIN1-203ENST00000469017 A0A0B4J2C4 111 aa12.55□□□□□ -0.4
SPIN1-203ENST00000469017 TRAV13-2A0A0B4J235 113 aa12.55□□□□□ -0.4
SPIN1-203ENST00000469017 TMEM126AQ9H061 195 aa12.53□□□□□ -0.4
SPIN1-203ENST00000469017 PRO1854Q9UHT4 67 aa12.53□□□□□ -0.4
SPIN1-203ENST00000469017 BIRC6Q9NR09 4857 aa12.53□□□□□ -0.4
SPIN1-203ENST00000469017 A0A1B0GWB2 263 aa12.52□□□□□ -0.4
SPIN1-203ENST00000469017 PSORS1C2Q9UIG4 136 aa12.52□□□□□ -0.41
SPIN1-203ENST00000469017 TRAV23DV6A0A075B6W5 121 aa12.51□□□□□ -0.41
SPIN1-203ENST00000469017 SMIM11BQ8TCY0 68 aa12.51□□□□□ -0.41
SPIN1-203ENST00000469017 NAA38Q9BRA0 125 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms