RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 LINC01620Q4KN68 170 aa5.25□□□□□ -1.57
HDAC6-216ENST00000468949 TSTD3H0UI37 97 aa5.24□□□□□ -1.57
HDAC6-216ENST00000468949 TIMM17BO60830 172 aa5.24□□□□□ -1.57
HDAC6-216ENST00000468949 TLX1NBP0CAT3 122 aa5.24□□□□□ -1.57
HDAC6-216ENST00000468949 PTTG1IPP53801 180 aa5.24□□□□□ -1.57
HDAC6-216ENST00000468949 SRSF9Q13242 221 aaKnown RBP eCLIP5.24□□□□□ -1.57
HDAC6-216ENST00000468949 LBHQ53QV2 105 aaPredicted RBP5.24□□□□□ -1.57
HDAC6-216ENST00000468949 MIR7-3HGQ8N6C7 128 aa5.24□□□□□ -1.57
HDAC6-216ENST00000468949 RYR1P21817 5038 aa5.23□□□□□ -1.57
HDAC6-216ENST00000468949 A0A096LNI7 61 aa5.23□□□□□ -1.57
HDAC6-216ENST00000468949 DLEU1O43261 78 aa5.23□□□□□ -1.57
HDAC6-216ENST00000468949 Q6ZRP5 223 aa5.23□□□□□ -1.57
HDAC6-216ENST00000468949 BOD1L2Q8IYS8 172 aa5.23□□□□□ -1.57
HDAC6-216ENST00000468949 UQCR10Q9UDW1 63 aa5.23□□□□□ -1.57
HDAC6-216ENST00000468949 CDK2AP2O75956 126 aa5.22□□□□□ -1.57
HDAC6-216ENST00000468949 HNRNPA3P51991 378 aaKnown RBP5.22□□□□□ -1.57
HDAC6-216ENST00000468949 NPC2P61916 151 aa5.22□□□□□ -1.57
HDAC6-216ENST00000468949 DAND5Q8N907 189 aa5.22□□□□□ -1.57
HDAC6-216ENST00000468949 HIST1H4GQ99525 98 aa5.22□□□□□ -1.57
HDAC6-216ENST00000468949 SND1-IT1Q9HBX3 110 aa5.22□□□□□ -1.57
HDAC6-216ENST00000468949 XAGE1AQ9HD64 81 aa5.22□□□□□ -1.57
HDAC6-216ENST00000468949 LRP1BQ9NZR2 4599 aa5.22□□□□□ -1.57
HDAC6-216ENST00000468949 CHTF8P0CG12 524 aa5.21□□□□□ -1.58
HDAC6-216ENST00000468949 RPL24P83731 157 aaKnown RBP5.21□□□□□ -1.58
HDAC6-216ENST00000468949 SDIM1Q6ZPB5 146 aa5.21□□□□□ -1.58
HDAC6-216ENST00000468949 Q6ZVH6 145 aa5.21□□□□□ -1.58
HDAC6-216ENST00000468949 FAM19A5Q7Z5A7 132 aaPredicted RBP5.21□□□□□ -1.58
HDAC6-216ENST00000468949 NKAPP1Q8N9T2 125 aa5.21□□□□□ -1.58
HDAC6-216ENST00000468949 SPANXDQ9BXN6 97 aa5.21□□□□□ -1.58
HDAC6-216ENST00000468949 PRO1933Q9H354 126 aa5.21□□□□□ -1.58
HDAC6-216ENST00000468949 SPANXCQ9NY87 97 aa5.21□□□□□ -1.58
HDAC6-216ENST00000468949 IFITM1P13164 125 aa5.2□□□□□ -1.58
HDAC6-216ENST00000468949 KRTAP10-1P60331 282 aa5.2□□□□□ -1.58
HDAC6-216ENST00000468949 SPACA4Q8TDM5 124 aa5.2□□□□□ -1.58
HDAC6-216ENST00000468949 SPANXB1Q9NS25 103 aaPredicted RBP5.2□□□□□ -1.58
HDAC6-216ENST00000468949 TP73-AS1Q9UF72 201 aa5.2□□□□□ -1.58
HDAC6-216ENST00000468949 HIGD1BQ9P298 99 aa5.19□□□□□ -1.58
HDAC6-216ENST00000468949 APOBP04114 4563 aaKnown RBP5.19□□□□□ -1.58
HDAC6-216ENST00000468949 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
HDAC6-216ENST00000468949 HSPG2P98160 4391 aa5.18□□□□□ -1.58
HDAC6-216ENST00000468949 M0QXV9 152 aa5.18□□□□□ -1.58
HDAC6-216ENST00000468949 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
HDAC6-216ENST00000468949 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
HDAC6-216ENST00000468949 ADAMTSL4-AS1Q5T5F5 129 aa5.18□□□□□ -1.58
HDAC6-216ENST00000468949 XP32Q5T750 250 aa5.18□□□□□ -1.58
HDAC6-216ENST00000468949 LINC00308Q8TCZ7 52 aa5.18□□□□□ -1.58
HDAC6-216ENST00000468949 LITAFQ99732 161 aa5.18□□□□□ -1.58
HDAC6-216ENST00000468949 A0A087WYN8 130 aa5.17□□□□□ -1.58
HDAC6-216ENST00000468949 NCR3O14931 201 aa5.17□□□□□ -1.58
HDAC6-216ENST00000468949 UBE2BP63146 152 aa5.17□□□□□ -1.58
HDAC6-216ENST00000468949 HSD52Q0P140 79 aa5.17□□□□□ -1.58
HDAC6-216ENST00000468949 TAL2Q16559 108 aa5.17□□□□□ -1.58
HDAC6-216ENST00000468949 C2orf91Q6ZV80 131 aa5.17□□□□□ -1.58
HDAC6-216ENST00000468949 C7orf33Q8WU49 177 aa5.17□□□□□ -1.58
HDAC6-216ENST00000468949 PCLOQ9Y6V0 5065 aa5.16□□□□□ -1.58
HDAC6-216ENST00000468949 FAM168BA1KXE4 195 aa5.16□□□□□ -1.58
HDAC6-216ENST00000468949 S100A7L2Q5SY68 101 aa5.16□□□□□ -1.58
HDAC6-216ENST00000468949 Q6ZSA8 131 aa5.16□□□□□ -1.58
HDAC6-216ENST00000468949 SCXQ7RTU7 201 aa5.16□□□□□ -1.58
HDAC6-216ENST00000468949 MUSTN1Q8IVN3 82 aa5.16□□□□□ -1.58
HDAC6-216ENST00000468949 PANO1I0J062 215 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 M0R143 59 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 NDUFC2O95298 119 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 SERTAD4-AS1Q5TG53 156 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 MRPL55Q7Z7F7 128 aaKnown RBP5.15□□□□□ -1.59
HDAC6-216ENST00000468949 OR13C6PQ8NH95 151 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 PPDPFQ9H3Y8 114 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 PLAC8Q9NZF1 115 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 FAM30AQ9NZY2 134 aa5.15□□□□□ -1.59
HDAC6-216ENST00000468949 ABCA13Q86UQ4 5058 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 LOC107984156A0A0G2JMH3 177 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 A0A1W2PNN7 141 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 GAGE10A6NGK3 116 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 M0R378 163 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 VPREB1P12018 145 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 HAMPP81172 84 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 SOSTDC1Q6X4U4 206 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 ARL17AQ8IVW1 177 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 CEND1Q8N111 149 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 CIRBP-AS1Q8TBR5 109 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 RAB37Q96AX2 223 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 C22orf24Q9Y442 160 aa5.14□□□□□ -1.59
HDAC6-216ENST00000468949 IGLV5-37A0A075B6J1 123 aa5.13□□□□□ -1.59
HDAC6-216ENST00000468949 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
HDAC6-216ENST00000468949 TRBV10-2A0A0K0K1G8 114 aa5.13□□□□□ -1.59
HDAC6-216ENST00000468949 A4D1N5 150 aa5.13□□□□□ -1.59
HDAC6-216ENST00000468949 A6NDN8 102 aa5.13□□□□□ -1.59
HDAC6-216ENST00000468949 DDTP30046 118 aa5.13□□□□□ -1.59
HDAC6-216ENST00000468949 PHF5AQ7RTV0 110 aaKnown RBP5.13□□□□□ -1.59
HDAC6-216ENST00000468949 KRTAP17-1Q9BYP8 105 aa5.13□□□□□ -1.59
HDAC6-216ENST00000468949 IGKV2-28A0A075B6P5 120 aa5.12□□□□□ -1.59
HDAC6-216ENST00000468949 IGKV2D-28P01615 120 aa5.12□□□□□ -1.59
HDAC6-216ENST00000468949 Q8N1X5 172 aa5.12□□□□□ -1.59
HDAC6-216ENST00000468949 RPL37AP8A6NKH3 93 aa5.11□□□□□ -1.59
HDAC6-216ENST00000468949 HINT1P49773 126 aaPredicted RBP5.11□□□□□ -1.59
HDAC6-216ENST00000468949 PRR3P79522 188 aaKnown RBP5.11□□□□□ -1.59
HDAC6-216ENST00000468949 BATFQ16520 125 aa5.11□□□□□ -1.59
HDAC6-216ENST00000468949 Q1RN00 199 aa5.11□□□□□ -1.59
HDAC6-216ENST00000468949 LINC00167Q96N53 147 aa5.11□□□□□ -1.59
HDAC6-216ENST00000468949 TMEM126AQ9H061 195 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms