RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 PMCHL2Q9BQD1 86 aa9.13□□□□□ -0.95
TMEM39A-205ENST00000468676 IGLV5-37A0A075B6J1 123 aa9.12□□□□□ -0.95
TMEM39A-205ENST00000468676 LEPROTO15243 131 aa9.12□□□□□ -0.95
TMEM39A-205ENST00000468676 SRSF9Q13242 221 aaKnown RBP eCLIP9.12□□□□□ -0.95
TMEM39A-205ENST00000468676 PET117Q6UWS5 81 aa9.12□□□□□ -0.95
TMEM39A-205ENST00000468676 MRPL55Q7Z7F7 128 aaKnown RBP9.12□□□□□ -0.95
TMEM39A-205ENST00000468676 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
TMEM39A-205ENST00000468676 NDUFA12Q9UI09 145 aa9.12□□□□□ -0.95
TMEM39A-205ENST00000468676 LINC00158P58513 81 aa9.11□□□□□ -0.95
TMEM39A-205ENST00000468676 NKAPP1Q8N9T2 125 aa9.11□□□□□ -0.95
TMEM39A-205ENST00000468676 RPL24P83731 157 aaKnown RBP9.1□□□□□ -0.95
TMEM39A-205ENST00000468676 LINC01545Q5VT33 79 aa9.1□□□□□ -0.95
TMEM39A-205ENST00000468676 J3QQQ9 107 aa9.09□□□□□ -0.95
TMEM39A-205ENST00000468676 NMUP48645 174 aa9.09□□□□□ -0.95
TMEM39A-205ENST00000468676 MEIG1Q5JSS6 88 aa9.09□□□□□ -0.95
TMEM39A-205ENST00000468676 REG3GQ6UW15 175 aa9.09□□□□□ -0.95
TMEM39A-205ENST00000468676 KRTAP11-1Q8IUC1 163 aa9.09□□□□□ -0.95
TMEM39A-205ENST00000468676 IGLV7-43P04211 117 aa9.08□□□□□ -0.96
TMEM39A-205ENST00000468676 LGALS3P17931 250 aaKnown RBP9.08□□□□□ -0.96
TMEM39A-205ENST00000468676 C3orf79P0CE67 100 aa9.07□□□□□ -0.96
TMEM39A-205ENST00000468676 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
TMEM39A-205ENST00000468676 LINC00167Q96N53 147 aa9.07□□□□□ -0.96
TMEM39A-205ENST00000468676 E9PLD3 99 aa9.06□□□□□ -0.96
TMEM39A-205ENST00000468676 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
TMEM39A-205ENST00000468676 KRTDAPP60985 99 aa9.06□□□□□ -0.96
TMEM39A-205ENST00000468676 DIRC1Q969H9 104 aa9.06□□□□□ -0.96
TMEM39A-205ENST00000468676 C20orf202A1L168 122 aa9.05□□□□□ -0.96
TMEM39A-205ENST00000468676 VPREB1P12018 145 aa9.05□□□□□ -0.96
TMEM39A-205ENST00000468676 AKR1D1P51857 326 aa9.05□□□□□ -0.96
TMEM39A-205ENST00000468676 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
TMEM39A-205ENST00000468676 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
TMEM39A-205ENST00000468676 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
TMEM39A-205ENST00000468676 GAGE10A6NGK3 116 aa9.03□□□□□ -0.96
TMEM39A-205ENST00000468676 RPL37AP8A6NKH3 93 aa9.03□□□□□ -0.96
TMEM39A-205ENST00000468676 S100A6P06703 90 aa9.03□□□□□ -0.96
TMEM39A-205ENST00000468676 LINC01600Q96MT4 127 aa9.03□□□□□ -0.96
TMEM39A-205ENST00000468676 S100A2P29034 98 aa9.02□□□□□ -0.97
TMEM39A-205ENST00000468676 FAT3Q8TDW7 4589 aa9.02□□□□□ -0.97
TMEM39A-205ENST00000468676 H0Y9J4 135 aa9.01□□□□□ -0.97
TMEM39A-205ENST00000468676 BCE1O60756 84 aa9.01□□□□□ -0.97
TMEM39A-205ENST00000468676 HERC1Q15751 4861 aa9□□□□□ -0.97
TMEM39A-205ENST00000468676 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
TMEM39A-205ENST00000468676 M0R378 163 aa9□□□□□ -0.97
TMEM39A-205ENST00000468676 ZNF861PO60384 105 aa9□□□□□ -0.97
TMEM39A-205ENST00000468676 BOD1L2Q8IYS8 172 aa9□□□□□ -0.97
TMEM39A-205ENST00000468676 HIST3H2BBQ8N257 126 aa9□□□□□ -0.97
TMEM39A-205ENST00000468676 LOC107984156A0A0G2JMH3 177 aa8.99□□□□□ -0.97
TMEM39A-205ENST00000468676 RPL28P46779 137 aaKnown RBP8.99□□□□□ -0.97
TMEM39A-205ENST00000468676 ARL17AQ8IVW1 177 aa8.99□□□□□ -0.97
TMEM39A-205ENST00000468676 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
TMEM39A-205ENST00000468676 IGKV2D-26A0A0A0MRZ7 120 aa8.98□□□□□ -0.97
TMEM39A-205ENST00000468676 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
TMEM39A-205ENST00000468676 MT1HL1P0DM35 61 aa8.98□□□□□ -0.97
TMEM39A-205ENST00000468676 Q8NDZ9 215 aa8.98□□□□□ -0.97
TMEM39A-205ENST00000468676 HIST1H2BLQ99880 126 aa8.98□□□□□ -0.97
TMEM39A-205ENST00000468676 MIEN1Q9BRT3 115 aa8.98□□□□□ -0.97
TMEM39A-205ENST00000468676 A0A0J9YXY3 114 aa8.97□□□□□ -0.97
TMEM39A-205ENST00000468676 SNRPEP62304 92 aaKnown RBP8.96□□□□□ -0.98
TMEM39A-205ENST00000468676 ZNF815PA8K554 130 aa8.95□□□□□ -0.98
TMEM39A-205ENST00000468676 TIMM17BO60830 172 aa8.95□□□□□ -0.98
TMEM39A-205ENST00000468676 UBE2AP49459 152 aa8.95□□□□□ -0.98
TMEM39A-205ENST00000468676 DAND5Q8N907 189 aa8.95□□□□□ -0.98
TMEM39A-205ENST00000468676 TMEM126AQ9H061 195 aa8.94□□□□□ -0.98
TMEM39A-205ENST00000468676 TRBV10-2A0A0K0K1G8 114 aa8.93□□□□□ -0.98
TMEM39A-205ENST00000468676 NDUFC2O95298 119 aa8.93□□□□□ -0.98
TMEM39A-205ENST00000468676 KRTAP10-8P60410 259 aa8.93□□□□□ -0.98
TMEM39A-205ENST00000468676 TMEM238C9JI98 176 aa8.92□□□□□ -0.98
TMEM39A-205ENST00000468676 NCR3O14931 201 aa8.92□□□□□ -0.98
TMEM39A-205ENST00000468676 S100A12P80511 92 aa8.92□□□□□ -0.98
TMEM39A-205ENST00000468676 ADAMTSL4-AS1Q5T5F5 129 aa8.92□□□□□ -0.98
TMEM39A-205ENST00000468676 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
TMEM39A-205ENST00000468676 ATOH7Q8N100 152 aa8.92□□□□□ -0.98
TMEM39A-205ENST00000468676 SPANXB1Q9NS25 103 aaPredicted RBP8.92□□□□□ -0.98
TMEM39A-205ENST00000468676 PRYO14603 147 aa8.91□□□□□ -0.98
TMEM39A-205ENST00000468676 LORP23490 312 aaPredicted RBP8.91□□□□□ -0.98
TMEM39A-205ENST00000468676 FAM19A1Q7Z5A9 133 aa8.91□□□□□ -0.98
TMEM39A-205ENST00000468676 C5orf52A6NGY3 159 aa8.9□□□□□ -0.98
TMEM39A-205ENST00000468676 ANKRD39Q53RE8 183 aa8.9□□□□□ -0.98
TMEM39A-205ENST00000468676 LITAFQ99732 161 aa8.9□□□□□ -0.98
TMEM39A-205ENST00000468676 KCNQ1DNQ9H478 68 aa8.9□□□□□ -0.98
TMEM39A-205ENST00000468676 HSBP1L1C9JCN9 74 aa8.89□□□□□ -0.99
TMEM39A-205ENST00000468676 KRTAP1-4P0C5Y4 121 aa8.89□□□□□ -0.99
TMEM39A-205ENST00000468676 SCGB1D4Q6XE38 83 aa8.89□□□□□ -0.99
TMEM39A-205ENST00000468676 TTTY13Q9BZ97 58 aa8.89□□□□□ -0.99
TMEM39A-205ENST00000468676 TRBV10-3A0A0K0K1G6 114 aa8.88□□□□□ -0.99
TMEM39A-205ENST00000468676 RPL13AP40429 203 aaKnown RBP8.88□□□□□ -0.99
TMEM39A-205ENST00000468676 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
TMEM39A-205ENST00000468676 DDTP30046 118 aa8.87□□□□□ -0.99
TMEM39A-205ENST00000468676 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
TMEM39A-205ENST00000468676 LINC00337Q8N6G1 96 aa8.87□□□□□ -0.99
TMEM39A-205ENST00000468676 COPS9Q8WXC6 57 aa8.87□□□□□ -0.99
TMEM39A-205ENST00000468676 CBY1Q9Y3M2 126 aa8.87□□□□□ -0.99
TMEM39A-205ENST00000468676 TNXBP22105 4242 aa8.87□□□□□ -0.99
TMEM39A-205ENST00000468676 SPRR1AP35321 89 aa8.86□□□□□ -0.99
TMEM39A-205ENST00000468676 NPC2P61916 151 aa8.86□□□□□ -0.99
TMEM39A-205ENST00000468676 PRLHP81277 87 aa8.86□□□□□ -0.99
TMEM39A-205ENST00000468676 S100A7L2Q5SY68 101 aa8.86□□□□□ -0.99
TMEM39A-205ENST00000468676 PRR26Q8N8Z3 221 aa8.86□□□□□ -0.99
TMEM39A-205ENST00000468676 SPANXCQ9NY87 97 aa8.86□□□□□ -0.99
TMEM39A-205ENST00000468676 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms