RNA–Protein interactions for RNA: ENST00000467613.5

UBP1-208, Transcript of upstream binding protein 1, human

TSL 5

Gene UBP1, Length 659 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBP1-208	ENST00000467613	CAMK2N2	Q96S95	79 aa		4.21	□□□□□ -1.74
UBP1-208	ENST00000467613	TP73-AS1	Q9UF72	201 aa		4.21	□□□□□ -1.74
UBP1-208	ENST00000467613	BIRC6	Q9NR09	4857 aa		4.21	□□□□□ -1.74
UBP1-208	ENST00000467613	EPPK1	P58107	5090 aa	Known RBP	4.21	□□□□□ -1.74
UBP1-208	ENST00000467613	NDUFC2-KCTD14	E9PQ53	114 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	TSTD3	H0UI37	97 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	ADAMTSL4-AS1	Q5T5F5	129 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613		Q6ZVH6	145 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	CARD19	Q96LW7	228 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	SPANXD	Q9BXN6	97 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	PRO1933	Q9H354	126 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	SPANXC	Q9NY87	97 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	ERG28	Q9UKR5	140 aa		4.2	□□□□□ -1.74
UBP1-208	ENST00000467613	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.19	□□□□□ -1.74
UBP1-208	ENST00000467613		A0A1B0GVY2	172 aa		4.19	□□□□□ -1.74
UBP1-208	ENST00000467613	TMEM238	C9JI98	176 aa		4.19	□□□□□ -1.74
UBP1-208	ENST00000467613	TAL2	Q16559	108 aa		4.19	□□□□□ -1.74
UBP1-208	ENST00000467613	C9orf116	Q5BN46	136 aa	Predicted RBP	4.19	□□□□□ -1.74
UBP1-208	ENST00000467613	SMIM13	P0DJ93	91 aa		4.18	□□□□□ -1.74
UBP1-208	ENST00000467613	CIRBP	Q14011	172 aa	Known RBP	4.18	□□□□□ -1.74
UBP1-208	ENST00000467613	SCGB1D4	Q6XE38	83 aa		4.18	□□□□□ -1.74
UBP1-208	ENST00000467613	SDIM1	Q6ZPB5	146 aa		4.18	□□□□□ -1.74
UBP1-208	ENST00000467613		Q6ZRP5	223 aa		4.18	□□□□□ -1.74
UBP1-208	ENST00000467613	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	LOC107984640	A0A0U1RRK4	108 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	EPM2A	B3EWF7	344 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	IFITM1	P13164	125 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	DDT	P30046	118 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	MEIG1	Q5JSS6	88 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	MIR7-3HG	Q8N6C7	128 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	PLA2G2D	Q9UNK4	145 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	PKIG	Q9Y2B9	76 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	RYR1	P21817	5038 aa		4.17	□□□□□ -1.74
UBP1-208	ENST00000467613	VPS13B	Q7Z7G8	4022 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	C16orf90	A8MZG2	172 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	PFN2	P35080	140 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	HNRNPA3	P51991	378 aa	Known RBP	4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	LINC00158	P58513	81 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	HSD52	Q0P140	79 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	C9orf129	Q5T035	196 aa	Known RBP	4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	SOSTDC1	Q6X4U4	206 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	LINC00308	Q8TCZ7	52 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	SND1-IT1	Q9HBX3	110 aa		4.16	□□□□□ -1.74
UBP1-208	ENST00000467613	IGLV5-52	A0A0A0MRZ9	124 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613	NDUFC2	O95298	119 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613	GCSH	P23434	173 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613		Q6ZSA8	131 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613	MUSTN1	Q8IVN3	82 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613	CEND1	Q8N111	149 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613	DAND5	Q8N907	189 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613	COPS9	Q8WXC6	57 aa		4.15	□□□□□ -1.75
UBP1-208	ENST00000467613	IGLV5-37	A0A075B6J1	123 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613		A0A096LNI7	61 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613		A0A0U1RRA0	63 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	CTAG1A	P78358	180 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	KRTAP7-1	Q8IUC3	87 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613		Q8NDZ9	215 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	SPACA4	Q8TDM5	124 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	HIST1H4G	Q99525	98 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	LINC00474	Q9P2X8	69 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	HSPG2	P98160	4391 aa		4.14	□□□□□ -1.75
UBP1-208	ENST00000467613	FAT1	Q14517	4588 aa		4.13	□□□□□ -1.75
UBP1-208	ENST00000467613		A0A1B0GWB2	263 aa		4.13	□□□□□ -1.75
UBP1-208	ENST00000467613	PANO1	I0J062	215 aa		4.13	□□□□□ -1.75
UBP1-208	ENST00000467613	VPREB1	P12018	145 aa		4.13	□□□□□ -1.75
UBP1-208	ENST00000467613	FXYD2	P54710	66 aa		4.13	□□□□□ -1.75
UBP1-208	ENST00000467613	RPL24	P83731	157 aa	Known RBP	4.13	□□□□□ -1.75
UBP1-208	ENST00000467613	RPL18A	Q02543	176 aa	Known RBP	4.13	□□□□□ -1.75
UBP1-208	ENST00000467613	BVES-AS1	Q5T3Y7	98 aa		4.13	□□□□□ -1.75
UBP1-208	ENST00000467613	KIAA1109	Q2LD37	5005 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	IGKV2-28	A0A075B6P5	120 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	TRBV10-2	A0A0K0K1G8	114 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613		A4D1N5	150 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	IGKV2D-28	P01615	120 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	FUS	P35637	526 aa	Known RBP eCLIP	4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	LINC01620	Q4KN68	170 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	GAGE2E	Q4V326	116 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	XAGE1A	Q9HD64	81 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613	GAGE2D	Q9UEU5	116 aa		4.12	□□□□□ -1.75
UBP1-208	ENST00000467613		A0A0B4J2C4	111 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613		M0R143	59 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613	CFC1B	P0CG36	223 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613	CFC1	P0CG37	223 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613	KRTAP10-1	P60331	282 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613	GAGE2B	Q13066	116 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613	SERTAD4-AS1	Q5TG53	156 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613	PLAC8	Q9NZF1	115 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613	PKHD1L1	Q86WI1	4243 aa		4.11	□□□□□ -1.75
UBP1-208	ENST00000467613		A0A1W2PNN7	141 aa		4.1	□□□□□ -1.75
UBP1-208	ENST00000467613	FAM168B	A1KXE4	195 aa		4.1	□□□□□ -1.75
UBP1-208	ENST00000467613	CHTF8	P0CG12	524 aa		4.1	□□□□□ -1.75
UBP1-208	ENST00000467613	NPC2	P61916	151 aa		4.1	□□□□□ -1.75
UBP1-208	ENST00000467613	LINC00337	Q8N6G1	96 aa		4.1	□□□□□ -1.75
UBP1-208	ENST00000467613	SNHG12	Q9BXW3	62 aa		4.1	□□□□□ -1.75
UBP1-208	ENST00000467613	SRRM2	Q9UQ35	2752 aa	Known RBP	4.1	□□□□□ -1.75
UBP1-208	ENST00000467613		A0A087WYN8	130 aa		4.09	□□□□□ -1.75
UBP1-208	ENST00000467613	IGKV2-24	A0A0C4DH68	120 aa		4.09	□□□□□ -1.75
UBP1-208	ENST00000467613		M0R378	163 aa		4.09	□□□□□ -1.75
UBP1-208	ENST00000467613	IGLV6-57	P01721	117 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms