RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 MRPL55Q7Z7F7 128 aaKnown RBP8.78□□□□□ -1
ATPAF2-204ENST00000467560 IGLV5-39A0A0G2JS06 123 aa8.77□□□□□ -1.01
ATPAF2-204ENST00000467560 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
ATPAF2-204ENST00000467560 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
ATPAF2-204ENST00000467560 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
ATPAF2-204ENST00000467560 SYS1-DBNDD2H3BUS1 97 aa8.76□□□□□ -1.01
ATPAF2-204ENST00000467560 TP73-AS1Q9UF72 201 aa8.76□□□□□ -1.01
ATPAF2-204ENST00000467560 A0A087X002 238 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 BCE1O60756 84 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 DPM2O94777 84 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 S100A2P29034 98 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 LINC01545Q5VT33 79 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
ATPAF2-204ENST00000467560 TMEM223A0PJW6 202 aa8.73□□□□□ -1.01
ATPAF2-204ENST00000467560 C5orf52A6NGY3 159 aa8.73□□□□□ -1.01
ATPAF2-204ENST00000467560 H0Y8G0 127 aa8.73□□□□□ -1.01
ATPAF2-204ENST00000467560 IGKCP01834 107 aa8.73□□□□□ -1.01
ATPAF2-204ENST00000467560 RPL13AP40429 203 aaKnown RBP8.73□□□□□ -1.01
ATPAF2-204ENST00000467560 C20orf202A1L168 122 aa8.72□□□□□ -1.01
ATPAF2-204ENST00000467560 C3orf79P0CE67 100 aa8.72□□□□□ -1.01
ATPAF2-204ENST00000467560 HIST1H2BLQ99880 126 aa8.72□□□□□ -1.01
ATPAF2-204ENST00000467560 ANAPC11Q9NYG5 84 aa8.72□□□□□ -1.01
ATPAF2-204ENST00000467560 IGLV5-37A0A075B6J1 123 aa8.71□□□□□ -1.02
ATPAF2-204ENST00000467560 KRTAP13-1Q8IUC0 172 aa8.71□□□□□ -1.02
ATPAF2-204ENST00000467560 TSPAN13O95857 204 aa8.7□□□□□ -1.02
ATPAF2-204ENST00000467560 RPL28P46779 137 aaKnown RBP8.7□□□□□ -1.02
ATPAF2-204ENST00000467560 HERVK_113P61574 105 aa8.7□□□□□ -1.02
ATPAF2-204ENST00000467560 SNRPEP62304 92 aaKnown RBP8.7□□□□□ -1.02
ATPAF2-204ENST00000467560 PRR4Q16378 134 aa8.7□□□□□ -1.02
ATPAF2-204ENST00000467560 PFN2P35080 140 aa8.69□□□□□ -1.02
ATPAF2-204ENST00000467560 KRTDAPP60985 99 aa8.69□□□□□ -1.02
ATPAF2-204ENST00000467560 Q8NDZ9 215 aa8.69□□□□□ -1.02
ATPAF2-204ENST00000467560 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
ATPAF2-204ENST00000467560 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
ATPAF2-204ENST00000467560 COX17Q14061 63 aa8.68□□□□□ -1.02
ATPAF2-204ENST00000467560 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
ATPAF2-204ENST00000467560 PLEKHB2Q96CS7 222 aa8.68□□□□□ -1.02
ATPAF2-204ENST00000467560 LINC00587B1AMM8 73 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 LEPROTO15243 131 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 VPREB1P12018 145 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 NMUP48645 174 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 HERV-K104P63124 156 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 PMCHL2Q9BQD1 86 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 SND1-IT1Q9HBX3 110 aa8.66□□□□□ -1.02
ATPAF2-204ENST00000467560 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
ATPAF2-204ENST00000467560 E9PLD3 99 aa8.65□□□□□ -1.02
ATPAF2-204ENST00000467560 CRYGAP11844 174 aa8.65□□□□□ -1.02
ATPAF2-204ENST00000467560 ERG28Q9UKR5 140 aa8.65□□□□□ -1.02
ATPAF2-204ENST00000467560 MYMXA0A1B0GTQ4 84 aa8.64□□□□□ -1.03
ATPAF2-204ENST00000467560 TYMSOSQ8TAI1 123 aa8.64□□□□□ -1.03
ATPAF2-204ENST00000467560 J3QQQ9 107 aa8.63□□□□□ -1.03
ATPAF2-204ENST00000467560 UBE2AP49459 152 aa8.63□□□□□ -1.03
ATPAF2-204ENST00000467560 PRLHP81277 87 aa8.63□□□□□ -1.03
ATPAF2-204ENST00000467560 TMEM126AQ9H061 195 aa8.61□□□□□ -1.03
ATPAF2-204ENST00000467560 NDUFA12Q9UI09 145 aa8.61□□□□□ -1.03
ATPAF2-204ENST00000467560 M0R378 163 aa8.6□□□□□ -1.03
ATPAF2-204ENST00000467560 LGALS3P17931 250 aaKnown RBP8.6□□□□□ -1.03
ATPAF2-204ENST00000467560 FAM19A1Q7Z5A9 133 aa8.59□□□□□ -1.03
ATPAF2-204ENST00000467560 RETNLBQ9BQ08 111 aa8.59□□□□□ -1.03
ATPAF2-204ENST00000467560 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
ATPAF2-204ENST00000467560 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
ATPAF2-204ENST00000467560 TSPEAR-AS2P59090 65 aa8.57□□□□□ -1.04
ATPAF2-204ENST00000467560 MUC17Q685J3 4493 aa8.57□□□□□ -1.04
ATPAF2-204ENST00000467560 HSBP1L1C9JCN9 74 aa8.56□□□□□ -1.04
ATPAF2-204ENST00000467560 RPL24P83731 157 aaKnown RBP8.56□□□□□ -1.04
ATPAF2-204ENST00000467560 SCGB1D1O95968 90 aa8.55□□□□□ -1.04
ATPAF2-204ENST00000467560 LINC00304Q8N9R0 145 aa8.55□□□□□ -1.04
ATPAF2-204ENST00000467560 FAT4Q6V0I7 4981 aa8.54□□□□□ -1.04
ATPAF2-204ENST00000467560 TIMM17BO60830 172 aa8.54□□□□□ -1.04
ATPAF2-204ENST00000467560 LINC00158P58513 81 aa8.54□□□□□ -1.04
ATPAF2-204ENST00000467560 JOSD1Q15040 202 aaPredicted RBP8.54□□□□□ -1.04
ATPAF2-204ENST00000467560 MEIG1Q5JSS6 88 aa8.54□□□□□ -1.04
ATPAF2-204ENST00000467560 C3orf22Q8N5N4 141 aa8.54□□□□□ -1.04
ATPAF2-204ENST00000467560 TMA7Q9Y2S6 64 aaKnown RBP8.54□□□□□ -1.04
ATPAF2-204ENST00000467560 LOC107984156A0A0G2JMH3 177 aa8.53□□□□□ -1.04
ATPAF2-204ENST00000467560 ARL17AQ8IVW1 177 aa8.53□□□□□ -1.04
ATPAF2-204ENST00000467560 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
ATPAF2-204ENST00000467560 IGKV2D-26A0A0A0MRZ7 120 aa8.52□□□□□ -1.05
ATPAF2-204ENST00000467560 SMIM13P0DJ93 91 aa8.52□□□□□ -1.05
ATPAF2-204ENST00000467560 HIGD2AQ9BW72 106 aa8.52□□□□□ -1.05
ATPAF2-204ENST00000467560 A0A0J9YXY3 114 aa8.51□□□□□ -1.05
ATPAF2-204ENST00000467560 ZNF815PA8K554 130 aa8.51□□□□□ -1.05
ATPAF2-204ENST00000467560 ANKRD39Q53RE8 183 aa8.51□□□□□ -1.05
ATPAF2-204ENST00000467560 MIR7-3HGQ8N6C7 128 aa8.5□□□□□ -1.05
ATPAF2-204ENST00000467560 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
ATPAF2-204ENST00000467560 Q6ZVH6 145 aa8.49□□□□□ -1.05
ATPAF2-204ENST00000467560 SPRR4Q96PI1 79 aa8.49□□□□□ -1.05
ATPAF2-204ENST00000467560 NCR3O14931 201 aa8.48□□□□□ -1.05
ATPAF2-204ENST00000467560 BOD1L2Q8IYS8 172 aa8.48□□□□□ -1.05
ATPAF2-204ENST00000467560 COPS9Q8WXC6 57 aa8.48□□□□□ -1.05
ATPAF2-204ENST00000467560 KRTAP4-16G5E9R7 235 aaPredicted RBP8.46□□□□□ -1.06
ATPAF2-204ENST00000467560 NDUFC2O95298 119 aa8.46□□□□□ -1.06
ATPAF2-204ENST00000467560 SPRR1AP35321 89 aa8.46□□□□□ -1.06
ATPAF2-204ENST00000467560 SCGB1D4Q6XE38 83 aa8.46□□□□□ -1.06
ATPAF2-204ENST00000467560 LITAFQ99732 161 aa8.46□□□□□ -1.06
ATPAF2-204ENST00000467560 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms