RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 RPL24P83731 157 aaKnown RBP4.38□□□□□ -1.71
SND1-205ENST00000467238 SYCNQ0VAF6 134 aa4.38□□□□□ -1.71
SND1-205ENST00000467238 LINC01600Q96MT4 127 aa4.38□□□□□ -1.71
SND1-205ENST00000467238 CSDC2Q9Y534 153 aaKnown RBP4.38□□□□□ -1.71
SND1-205ENST00000467238 PPP1R17O96001 155 aa4.37□□□□□ -1.71
SND1-205ENST00000467238 FCER1GP30273 86 aa4.37□□□□□ -1.71
SND1-205ENST00000467238 CAMPP49913 170 aa4.37□□□□□ -1.71
SND1-205ENST00000467238 C2orf91Q6ZV80 131 aa4.37□□□□□ -1.71
SND1-205ENST00000467238 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
SND1-205ENST00000467238 UBE2D4Q9Y2X8 147 aa4.37□□□□□ -1.71
SND1-205ENST00000467238 H3BUT2 72 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 COX7A2LO14548 114 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 HBDP02042 147 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 SMAGPQ0VAQ4 97 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 MRPL51Q4U2R6 128 aaKnown RBP4.36□□□□□ -1.71
SND1-205ENST00000467238 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
SND1-205ENST00000467238 FAM104BQ5XKR9 115 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 SPINK6Q6UWN8 80 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 Q6ZUT4 128 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 SPANXDQ9BXN6 97 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 CYSLTR1Q9Y271 337 aa4.36□□□□□ -1.71
SND1-205ENST00000467238 IGLV4-69A0A075B6H9 119 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 TRAV13-1A0A0B4J241 112 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 A0A0J9YXV3 536 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 LOC107984640A0A0U1RRK4 108 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 A0A1W2PNN7 141 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 ATP5LO75964 103 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 CKS1BP61024 79 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 RPL32P62910 135 aaKnown RBP4.35□□□□□ -1.71
SND1-205ENST00000467238 GAGE2BQ13066 116 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 SRSF9Q13242 221 aaKnown RBP eCLIP4.35□□□□□ -1.71
SND1-205ENST00000467238 Q6ZRP5 223 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 Q6ZVH6 145 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 URB1-AS1Q96HZ7 61 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 C2orf48Q96LS8 159 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 CAMK2N2Q96S95 79 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 TIMM21Q9BVV7 248 aa4.35□□□□□ -1.71
SND1-205ENST00000467238 H0Y8G0 127 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.34□□□□□ -1.71
SND1-205ENST00000467238 APOMO95445 188 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 KRTAP10-8P60410 259 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 C5orf38Q86SI9 138 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 ORMDL3Q8N138 153 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 Q8N9P0 234 aaPredicted RBP4.34□□□□□ -1.71
SND1-205ENST00000467238 FAM104AQ969W3 186 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 C20orf78Q9BR46 151 aa4.34□□□□□ -1.71
SND1-205ENST00000467238 LINC01546A6NGU7 62 aa4.33□□□□□ -1.72
SND1-205ENST00000467238 LINC01549A6NIU2 74 aa4.33□□□□□ -1.72
SND1-205ENST00000467238 CKS2P33552 79 aa4.33□□□□□ -1.72
SND1-205ENST00000467238 RPL39P62891 51 aaKnown RBP4.33□□□□□ -1.72
SND1-205ENST00000467238 SPAG11BQ08648 103 aa4.33□□□□□ -1.72
SND1-205ENST00000467238 C9orf116Q5BN46 136 aaPredicted RBP4.33□□□□□ -1.72
SND1-205ENST00000467238 IFI27L1Q96BM0 104 aa4.33□□□□□ -1.72
SND1-205ENST00000467238 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
SND1-205ENST00000467238 NXT2Q9NPJ8 142 aaKnown RBP4.33□□□□□ -1.72
SND1-205ENST00000467238 IGHV3OR16-9A0A0B4J2B5 98 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 D6R8Y8 96 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 E9PLD3 99 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 H3BMG7 143 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 NPYP01303 97 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 MRPS36P82909 103 aaKnown RBP4.32□□□□□ -1.72
SND1-205ENST00000467238 RPL18AQ02543 176 aaKnown RBP4.32□□□□□ -1.72
SND1-205ENST00000467238 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 OPRPNQ99935 248 aaPredicted RBP4.32□□□□□ -1.72
SND1-205ENST00000467238 SPANXB1Q9NS25 103 aaPredicted RBP4.32□□□□□ -1.72
SND1-205ENST00000467238 SPANXCQ9NY87 97 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 MRPL35Q9NZE8 188 aaKnown RBP4.32□□□□□ -1.72
SND1-205ENST00000467238 PSORS1C2Q9UIG4 136 aa4.32□□□□□ -1.72
SND1-205ENST00000467238 PRSS47A8MTI9 375 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 F8WDY8 70 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 K7EMI3 77 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 M0QXV9 152 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 DPM2O94777 84 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 PLNP26678 52 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 PHF5AQ7RTV0 110 aaKnown RBP4.31□□□□□ -1.72
SND1-205ENST00000467238 CEND1Q8N111 149 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
SND1-205ENST00000467238 GEMIN7Q9H840 131 aaKnown RBP4.31□□□□□ -1.72
SND1-205ENST00000467238 MUC2Q02817 5179 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 TRBV20-1A0A075B6N2 111 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 IGLV5-39A0A0G2JS06 123 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 A0A1B0GWB2 263 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 NDUFA1O15239 70 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 TSPAN13O95857 204 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 IGKCP01834 107 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 TLX1NBP0CAT3 122 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 NMUP48645 174 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 C1orf137Q5JT78 98 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 LINC00173Q6ZV60 143 aa4.3□□□□□ -1.72
SND1-205ENST00000467238 IFI27P40305 119 aaPredicted RBP4.29□□□□□ -1.72
SND1-205ENST00000467238 UNQ6190/PRO20217Q6UXQ8 127 aa4.29□□□□□ -1.72
SND1-205ENST00000467238 PPDPFLQ8WWR9 84 aa4.29□□□□□ -1.72
SND1-205ENST00000467238 RAB37Q96AX2 223 aa4.29□□□□□ -1.72
SND1-205ENST00000467238 C6orf48Q9UBA6 75 aa4.29□□□□□ -1.72
SND1-205ENST00000467238 PYGO1Q9Y3Y4 419 aa4.29□□□□□ -1.72
SND1-205ENST00000467238 IGLV4-3A0A075B6K6 122 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 A0A087WZ39 114 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 TRAV12-1A0A0B4J245 112 aa4.28□□□□□ -1.72
SND1-205ENST00000467238 FAM168BA1KXE4 195 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms