RNA–Protein interactions for RNA: ENST00000466764.5

RBM3-204, Transcript of RNA binding motif protein 3, human

TSL 3

Gene RBM3, Length 1,375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM3-204	ENST00000466764		E9PLD3	99 aa		10.41	□□□□□ -0.74
RBM3-204	ENST00000466764	LGALS3	P17931	250 aa	Known RBP	10.41	□□□□□ -0.74
RBM3-204	ENST00000466764	ATOH7	Q8N100	152 aa		10.41	□□□□□ -0.74
RBM3-204	ENST00000466764	C20orf202	A1L168	122 aa		10.4	□□□□□ -0.74
RBM3-204	ENST00000466764	COX17	Q14061	63 aa		10.4	□□□□□ -0.74
RBM3-204	ENST00000466764	PSORS1C2	Q9UIG4	136 aa		10.4	□□□□□ -0.74
RBM3-204	ENST00000466764	C22orf24	Q9Y442	160 aa		10.4	□□□□□ -0.74
RBM3-204	ENST00000466764	HERV-K104	P63124	156 aa		10.39	□□□□□ -0.75
RBM3-204	ENST00000466764	IGKV2D-26	A0A0A0MRZ7	120 aa		10.39	□□□□□ -0.75
RBM3-204	ENST00000466764	UBE2B	P63146	152 aa		10.39	□□□□□ -0.75
RBM3-204	ENST00000466764		Q8NDZ9	215 aa		10.39	□□□□□ -0.75
RBM3-204	ENST00000466764	C5orf52	A6NGY3	159 aa		10.38	□□□□□ -0.75
RBM3-204	ENST00000466764	MIR7-3HG	Q8N6C7	128 aa		10.38	□□□□□ -0.75
RBM3-204	ENST00000466764	LRP1	Q07954	4544 aa	Known RBP	10.37	□□□□□ -0.75
RBM3-204	ENST00000466764	DAND5	Q8N907	189 aa		10.37	□□□□□ -0.75
RBM3-204	ENST00000466764	TTTY13	Q9BZ97	58 aa		10.37	□□□□□ -0.75
RBM3-204	ENST00000466764	PLA2G2D	Q9UNK4	145 aa		10.37	□□□□□ -0.75
RBM3-204	ENST00000466764	GAGE10	A6NGK3	116 aa		10.36	□□□□□ -0.75
RBM3-204	ENST00000466764	NMU	P48645	174 aa		10.36	□□□□□ -0.75
RBM3-204	ENST00000466764	ANKRD39	Q53RE8	183 aa		10.36	□□□□□ -0.75
RBM3-204	ENST00000466764	C1orf137	Q5JT78	98 aa		10.36	□□□□□ -0.75
RBM3-204	ENST00000466764	MRPL55	Q7Z7F7	128 aa	Known RBP	10.36	□□□□□ -0.75
RBM3-204	ENST00000466764	FAT3	Q8TDW7	4589 aa		10.35	□□□□□ -0.75
RBM3-204	ENST00000466764	IGLV5-37	A0A075B6J1	123 aa		10.35	□□□□□ -0.75
RBM3-204	ENST00000466764	VPREB1	P12018	145 aa		10.35	□□□□□ -0.75
RBM3-204	ENST00000466764	NKAPP1	Q8N9T2	125 aa		10.34	□□□□□ -0.75
RBM3-204	ENST00000466764	LINC00167	Q96N53	147 aa		10.34	□□□□□ -0.75
RBM3-204	ENST00000466764	TP73-AS1	Q9UF72	201 aa		10.34	□□□□□ -0.75
RBM3-204	ENST00000466764		A0A0J9YXY3	114 aa		10.33	□□□□□ -0.76
RBM3-204	ENST00000466764	RPL37AP8	A6NKH3	93 aa		10.33	□□□□□ -0.76
RBM3-204	ENST00000466764	LBH	Q53QV2	105 aa	Predicted RBP	10.33	□□□□□ -0.76
RBM3-204	ENST00000466764	ZNF815P	A8K554	130 aa		10.31	□□□□□ -0.76
RBM3-204	ENST00000466764	LINC00587	B1AMM8	73 aa		10.3	□□□□□ -0.76
RBM3-204	ENST00000466764	BOD1L2	Q8IYS8	172 aa		10.3	□□□□□ -0.76
RBM3-204	ENST00000466764	NPC2	P61916	151 aa		10.29	□□□□□ -0.76
RBM3-204	ENST00000466764	RPL24	P83731	157 aa	Known RBP	10.29	□□□□□ -0.76
RBM3-204	ENST00000466764	ADAMTSL4-AS1	Q5T5F5	129 aa		10.29	□□□□□ -0.76
RBM3-204	ENST00000466764	TMA7	Q9Y2S6	64 aa	Known RBP	10.29	□□□□□ -0.76
RBM3-204	ENST00000466764	IGKV2-28	A0A075B6P5	120 aa		10.28	□□□□□ -0.76
RBM3-204	ENST00000466764	IGKV2D-28	P01615	120 aa		10.28	□□□□□ -0.76
RBM3-204	ENST00000466764	IGLV7-43	P04211	117 aa		10.28	□□□□□ -0.76
RBM3-204	ENST00000466764	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.28	□□□□□ -0.76
RBM3-204	ENST00000466764	NCR3	O14931	201 aa		10.27	□□□□□ -0.76
RBM3-204	ENST00000466764	SRSF9	Q13242	221 aa	Known RBP eCLIP	10.27	□□□□□ -0.76	2e-8	■■□□□ 11.8
RBM3-204	ENST00000466764	EIF4EBP3	O60516	100 aa	Predicted RBP	10.26	□□□□□ -0.77
RBM3-204	ENST00000466764	SCGB1D1	O95968	90 aa		10.26	□□□□□ -0.77
RBM3-204	ENST00000466764	AKR1D1	P51857	326 aa		10.26	□□□□□ -0.77
RBM3-204	ENST00000466764	SOSTDC1	Q6X4U4	206 aa		10.26	□□□□□ -0.77
RBM3-204	ENST00000466764	PCP2	Q8IVA1	136 aa		10.26	□□□□□ -0.77
RBM3-204	ENST00000466764	LITAF	Q99732	161 aa		10.26	□□□□□ -0.77
RBM3-204	ENST00000466764	SPINK6	Q6UWN8	80 aa		10.26	□□□□□ -0.77
RBM3-204	ENST00000466764	IGLV1-50	A0A075B6I6	118 aa		10.24	□□□□□ -0.77
RBM3-204	ENST00000466764	LOC107984156	A0A0G2JMH3	177 aa		10.23	□□□□□ -0.77
RBM3-204	ENST00000466764	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.23	□□□□□ -0.77
RBM3-204	ENST00000466764	TMEM238	C9JI98	176 aa		10.23	□□□□□ -0.77
RBM3-204	ENST00000466764		M0R378	163 aa		10.23	□□□□□ -0.77
RBM3-204	ENST00000466764	ARL17A	Q8IVW1	177 aa		10.23	□□□□□ -0.77
RBM3-204	ENST00000466764	MIEN1	Q9BRT3	115 aa		10.23	□□□□□ -0.77
RBM3-204	ENST00000466764	HSBP1L1	C9JCN9	74 aa		10.22	□□□□□ -0.77
RBM3-204	ENST00000466764	BCE1	O60756	84 aa		10.22	□□□□□ -0.77
RBM3-204	ENST00000466764	TIMM17B	O60830	172 aa		10.22	□□□□□ -0.77
RBM3-204	ENST00000466764	SCGB1D4	Q6XE38	83 aa		10.21	□□□□□ -0.78
RBM3-204	ENST00000466764	HERC1	Q15751	4861 aa		10.21	□□□□□ -0.78
RBM3-204	ENST00000466764		J3QL48	77 aa		10.2	□□□□□ -0.78
RBM3-204	ENST00000466764	LINC00308	Q8TCZ7	52 aa		10.2	□□□□□ -0.78
RBM3-204	ENST00000466764	TMEM126A	Q9H061	195 aa		10.2	□□□□□ -0.78
RBM3-204	ENST00000466764	OXT	P01178	125 aa		10.19	□□□□□ -0.78
RBM3-204	ENST00000466764	TRBV10-3	A0A0K0K1G6	114 aa		10.18	□□□□□ -0.78
RBM3-204	ENST00000466764		H0Y9J4	135 aa		10.18	□□□□□ -0.78
RBM3-204	ENST00000466764	ZNF861P	O60384	105 aa		10.18	□□□□□ -0.78
RBM3-204	ENST00000466764	REG3G	Q6UW15	175 aa		10.18	□□□□□ -0.78
RBM3-204	ENST00000466764	DIRC1	Q969H9	104 aa		10.17	□□□□□ -0.78
RBM3-204	ENST00000466764	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.17	□□□□□ -0.78
RBM3-204	ENST00000466764	UBE2A	P49459	152 aa		10.16	□□□□□ -0.78
RBM3-204	ENST00000466764	PRLH	P81277	87 aa		10.16	□□□□□ -0.78
RBM3-204	ENST00000466764	FAM19A1	Q7Z5A9	133 aa		10.16	□□□□□ -0.78
RBM3-204	ENST00000466764	NDUFC2	O95298	119 aa		10.15	□□□□□ -0.78
RBM3-204	ENST00000466764	MT1HL1	P0DM35	61 aa		10.15	□□□□□ -0.78
RBM3-204	ENST00000466764	KRTAP13-1	Q8IUC0	172 aa		10.15	□□□□□ -0.78
RBM3-204	ENST00000466764	SPANXD	Q9BXN6	97 aa		10.15	□□□□□ -0.78
RBM3-204	ENST00000466764	SPANXC	Q9NY87	97 aa		10.15	□□□□□ -0.78
RBM3-204	ENST00000466764	TRBV10-2	A0A0K0K1G8	114 aa		10.14	□□□□□ -0.79
RBM3-204	ENST00000466764	RPL28	P46779	137 aa	Known RBP	10.14	□□□□□ -0.79
RBM3-204	ENST00000466764	JOSD1	Q15040	202 aa	Predicted RBP	10.14	□□□□□ -0.79
RBM3-204	ENST00000466764	DDT	P30046	118 aa		10.14	□□□□□ -0.79
RBM3-204	ENST00000466764	TNXB	P22105	4242 aa		10.13	□□□□□ -0.79
RBM3-204	ENST00000466764	PRY	O14603	147 aa		10.13	□□□□□ -0.79
RBM3-204	ENST00000466764	LCE2B	O14633	110 aa		10.13	□□□□□ -0.79
RBM3-204	ENST00000466764	LINC01600	Q96MT4	127 aa		10.13	□□□□□ -0.79
RBM3-204	ENST00000466764	KCNQ1DN	Q9H478	68 aa		10.13	□□□□□ -0.79
RBM3-204	ENST00000466764	PAM16	Q9Y3D7	125 aa		10.13	□□□□□ -0.79
RBM3-204	ENST00000466764	KRTAP1-4	P0C5Y4	121 aa		10.11	□□□□□ -0.79
RBM3-204	ENST00000466764	SPATA45	Q537H7	98 aa		10.11	□□□□□ -0.79
RBM3-204	ENST00000466764	PYY3	Q5JQD4	70 aa		10.11	□□□□□ -0.79
RBM3-204	ENST00000466764	S100A7L2	Q5SY68	101 aa		10.11	□□□□□ -0.79
RBM3-204	ENST00000466764	IGLV6-57	P01721	117 aa		10.1	□□□□□ -0.79
RBM3-204	ENST00000466764	SPRR1A	P35321	89 aa		10.1	□□□□□ -0.79
RBM3-204	ENST00000466764	MUSTN1	Q8IVN3	82 aa		10.1	□□□□□ -0.79
RBM3-204	ENST00000466764	VAMP8	Q9BV40	100 aa		10.1	□□□□□ -0.79
RBM3-204	ENST00000466764	COX8A	P10176	69 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms