RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
UFD1-206ENST00000466373 CMYA5Q8N3K9 4069 aa7.03□□□□□ -1.28
UFD1-206ENST00000466373 XAGE1AQ9HD64 81 aa7.03□□□□□ -1.28
UFD1-206ENST00000466373 KLK5Q9Y337 293 aaPredicted RBP7.03□□□□□ -1.28
UFD1-206ENST00000466373 NDUFC2O95298 119 aa7.02□□□□□ -1.29
UFD1-206ENST00000466373 RPL18AQ02543 176 aaKnown RBP7.02□□□□□ -1.29
UFD1-206ENST00000466373 Q8N814 137 aa7.02□□□□□ -1.29
UFD1-206ENST00000466373 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
UFD1-206ENST00000466373 Q6ZTC4 211 aa7.02□□□□□ -1.29
UFD1-206ENST00000466373 HIGD2BQ4VC39 106 aa7.02□□□□□ -1.29
UFD1-206ENST00000466373 KPRPQ5T749 579 aaPredicted RBP7.02□□□□□ -1.29
UFD1-206ENST00000466373 SS18L2Q9UHA2 77 aa7.02□□□□□ -1.29
UFD1-206ENST00000466373 LINC00846Q9NV44 126 aa7.01□□□□□ -1.29
UFD1-206ENST00000466373 SDIM1Q6ZPB5 146 aa7.01□□□□□ -1.29
UFD1-206ENST00000466373 OBSCN-AS1Q96MR7 158 aa7□□□□□ -1.29
UFD1-206ENST00000466373 COL6A5A8TX70 2615 aa7□□□□□ -1.29
UFD1-206ENST00000466373 IGKV3D-7A0A0C4DH55 119 aa7□□□□□ -1.29
UFD1-206ENST00000466373 C3orf56Q8N813 242 aa7□□□□□ -1.29
UFD1-206ENST00000466373 NBEAL1Q6ZS30 2694 aa7□□□□□ -1.29
UFD1-206ENST00000466373 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
UFD1-206ENST00000466373 WIPF1O43516 503 aa6.99□□□□□ -1.29
UFD1-206ENST00000466373 A0A0J9YWU9 116 aa6.99□□□□□ -1.29
UFD1-206ENST00000466373 IMUPQ9GZP8 106 aa6.98□□□□□ -1.29
UFD1-206ENST00000466373 ZNF561-AS1K7EIQ3 104 aa6.97□□□□□ -1.29
UFD1-206ENST00000466373 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
UFD1-206ENST00000466373 ESRGQ1W209 222 aa6.97□□□□□ -1.29
UFD1-206ENST00000466373 LINC00167Q96N53 147 aa6.97□□□□□ -1.29
UFD1-206ENST00000466373 TRBV10-3A0A0K0K1G6 114 aa6.96□□□□□ -1.29
UFD1-206ENST00000466373 LINC00575Q6W349 94 aa6.96□□□□□ -1.29
UFD1-206ENST00000466373 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.29
UFD1-206ENST00000466373 KRTAP24-1Q3LI83 254 aa6.96□□□□□ -1.3
UFD1-206ENST00000466373 A0A087WVE0 104 aa6.95□□□□□ -1.3
UFD1-206ENST00000466373 hADV29S1A0JD25 119 aa6.95□□□□□ -1.3
UFD1-206ENST00000466373 A0A1B0GX51 115 aa6.95□□□□□ -1.3
UFD1-206ENST00000466373 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
UFD1-206ENST00000466373 CCKP06307 115 aa6.94□□□□□ -1.3
UFD1-206ENST00000466373 JMJD7-PLA2G4BH0Y9G9 81 aa6.94□□□□□ -1.3
UFD1-206ENST00000466373 Q6ZRU5 148 aa6.94□□□□□ -1.3
UFD1-206ENST00000466373 IGKV2D-24A0A075B6R9 120 aa6.93□□□□□ -1.3
UFD1-206ENST00000466373 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
UFD1-206ENST00000466373 Q6ZQY7 126 aa6.93□□□□□ -1.3
UFD1-206ENST00000466373 LAMTOR3Q9UHA4 124 aa6.93□□□□□ -1.3
UFD1-206ENST00000466373 DEFB131BA0A096LNP1 70 aa6.93□□□□□ -1.3
UFD1-206ENST00000466373 TRAV23DV6A0A075B6W5 121 aa6.92□□□□□ -1.3
UFD1-206ENST00000466373 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
UFD1-206ENST00000466373 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
UFD1-206ENST00000466373 C15orf56Q8N910 161 aa6.92□□□□□ -1.3
UFD1-206ENST00000466373 HIST1H4AP62805 103 aaKnown RBP6.92□□□□□ -1.3
UFD1-206ENST00000466373 C11orf45Q8TAV5 145 aa6.92□□□□□ -1.3
UFD1-206ENST00000466373 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
UFD1-206ENST00000466373 BAHCC1Q9P281 2608 aa6.91□□□□□ -1.3
UFD1-206ENST00000466373 H3BNG1 76 aa6.9□□□□□ -1.3
UFD1-206ENST00000466373 Q6JHZ5 121 aa6.9□□□□□ -1.3
UFD1-206ENST00000466373 MUC7Q8TAX7 377 aa6.9□□□□□ -1.3
UFD1-206ENST00000466373 DIRC1Q969H9 104 aa6.9□□□□□ -1.3
UFD1-206ENST00000466373 ZNF73O43830 326 aaPredicted RBP6.9□□□□□ -1.3
UFD1-206ENST00000466373 RBM3P98179 157 aaKnown RBP6.9□□□□□ -1.3
UFD1-206ENST00000466373 DNAH3Q8TD57 4116 aa6.9□□□□□ -1.31
UFD1-206ENST00000466373 MGAM2Q2M2H8 2515 aa6.9□□□□□ -1.31
UFD1-206ENST00000466373 M0R2N4 97 aa6.9□□□□□ -1.31
UFD1-206ENST00000466373 EGFEM1PQ0D2K5 195 aa6.9□□□□□ -1.31
UFD1-206ENST00000466373 VPREB1P12018 145 aa6.89□□□□□ -1.31
UFD1-206ENST00000466373 LYSTQ99698 3801 aa6.89□□□□□ -1.31
UFD1-206ENST00000466373 Q6ZRP5 223 aa6.88□□□□□ -1.31
UFD1-206ENST00000466373 C9orf153Q5TBE3 101 aa6.88□□□□□ -1.31
UFD1-206ENST00000466373 NDUFC2-KCTD14E9PQ53 114 aa6.87□□□□□ -1.31
UFD1-206ENST00000466373 MRAPQ8TCY5 172 aa6.87□□□□□ -1.31
UFD1-206ENST00000466373 COX7BP24311 80 aa6.87□□□□□ -1.31
UFD1-206ENST00000466373 C3orf22Q8N5N4 141 aa6.87□□□□□ -1.31
UFD1-206ENST00000466373 Q6ZQT0 140 aa6.87□□□□□ -1.31
UFD1-206ENST00000466373 LINC01556Q5JQF7 62 aa6.86□□□□□ -1.31
UFD1-206ENST00000466373 FAM19A1Q7Z5A9 133 aa6.86□□□□□ -1.31
UFD1-206ENST00000466373 DSCR8Q96T75 97 aa6.86□□□□□ -1.31
UFD1-206ENST00000466373 UQCRQO14949 82 aa6.85□□□□□ -1.31
UFD1-206ENST00000466373 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
UFD1-206ENST00000466373 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
UFD1-206ENST00000466373 ATOX1O00244 68 aa6.85□□□□□ -1.31
UFD1-206ENST00000466373 ELOF1P60002 83 aaKnown RBP6.85□□□□□ -1.31
UFD1-206ENST00000466373 USP17L23D6RBM5 183 aa6.85□□□□□ -1.31
UFD1-206ENST00000466373 M0R378 163 aa6.85□□□□□ -1.31
UFD1-206ENST00000466373 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
UFD1-206ENST00000466373 C2orf48Q96LS8 159 aa6.85□□□□□ -1.31
UFD1-206ENST00000466373 DNAH10Q8IVF4 4471 aa6.84□□□□□ -1.31
UFD1-206ENST00000466373 COX7CP15954 63 aa6.84□□□□□ -1.31
UFD1-206ENST00000466373 CASC10Q5T4H9 136 aa6.84□□□□□ -1.31
UFD1-206ENST00000466373 STAB2Q8WWQ8 2551 aa6.83□□□□□ -1.32
UFD1-206ENST00000466373 HAMPP81172 84 aa6.83□□□□□ -1.32
UFD1-206ENST00000466373 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
UFD1-206ENST00000466373 SERTAD4-AS1Q5TG53 156 aa6.82□□□□□ -1.32
UFD1-206ENST00000466373 SMIM20Q8N5G0 67 aa6.82□□□□□ -1.32
UFD1-206ENST00000466373 TENM2Q9NT68 2774 aa6.82□□□□□ -1.32
UFD1-206ENST00000466373 CSMD3Q7Z407 3707 aa6.82□□□□□ -1.32
UFD1-206ENST00000466373 LOC110117498A0A087WWA1 95 aa6.82□□□□□ -1.32
UFD1-206ENST00000466373 LINC00588Q9Y4M8 146 aa6.82□□□□□ -1.32
UFD1-206ENST00000466373 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.82□□□□□ -1.32
UFD1-206ENST00000466373 CYSTM1Q9H1C7 97 aa6.82□□□□□ -1.32
UFD1-206ENST00000466373 NKAPP1Q8N9T2 125 aa6.81□□□□□ -1.32
UFD1-206ENST00000466373 DNAH10OSP0CZ25 163 aa6.81□□□□□ -1.32
UFD1-206ENST00000466373 UPK3BQ9BT76 320 aa6.81□□□□□ -1.32
UFD1-206ENST00000466373 DNAH1Q9P2D7 4330 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms