RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 A0A0U1RRA0 63 aa14.16□□□□□ -0.14
SNX21-208ENST00000466252 LINC00587B1AMM8 73 aa14.15□□□□□ -0.14
SNX21-208ENST00000466252 S100A6P06703 90 aa14.15□□□□□ -0.14
SNX21-208ENST00000466252 LBHQ53QV2 105 aaPredicted RBP14.15□□□□□ -0.14
SNX21-208ENST00000466252 MRPL55Q7Z7F7 128 aaKnown RBP14.15□□□□□ -0.14
SNX21-208ENST00000466252 NMUP48645 174 aa14.14□□□□□ -0.15
SNX21-208ENST00000466252 SNRPEP62304 92 aaKnown RBP14.14□□□□□ -0.15
SNX21-208ENST00000466252 Q8NDZ9 215 aa14.14□□□□□ -0.15
SNX21-208ENST00000466252 LINC00167Q96N53 147 aa14.14□□□□□ -0.15
SNX21-208ENST00000466252 KRTAP29-1A8MX34 341 aaPredicted RBP14.13□□□□□ -0.15
SNX21-208ENST00000466252 VPREB1P12018 145 aa14.13□□□□□ -0.15
SNX21-208ENST00000466252 LGALS3P17931 250 aaKnown RBP14.13□□□□□ -0.15
SNX21-208ENST00000466252 MEIG1Q5JSS6 88 aa14.13□□□□□ -0.15
SNX21-208ENST00000466252 C1orf137Q5JT78 98 aa14.13□□□□□ -0.15
SNX21-208ENST00000466252 MYCBP2O75592 4640 aa14.13□□□□□ -0.15
SNX21-208ENST00000466252 C5orf52A6NGY3 159 aa14.12□□□□□ -0.15
SNX21-208ENST00000466252 S100A2P29034 98 aa14.12□□□□□ -0.15
SNX21-208ENST00000466252 UBE2BP63146 152 aa14.12□□□□□ -0.15
SNX21-208ENST00000466252 MIR7-3HGQ8N6C7 128 aa14.12□□□□□ -0.15
SNX21-208ENST00000466252 SPINK6Q6UWN8 80 aa14.11□□□□□ -0.15
SNX21-208ENST00000466252 IGKV2D-26A0A0A0MRZ7 120 aa14.1□□□□□ -0.15
SNX21-208ENST00000466252 C20orf202A1L168 122 aa14.09□□□□□ -0.15
SNX21-208ENST00000466252 IGLV7-43P04211 117 aa14.09□□□□□ -0.15
SNX21-208ENST00000466252 RPL24P83731 157 aaKnown RBP14.09□□□□□ -0.15
SNX21-208ENST00000466252 OXTP01178 125 aa14.08□□□□□ -0.16
SNX21-208ENST00000466252 LRP1Q07954 4544 aaKnown RBP14.08□□□□□ -0.16
SNX21-208ENST00000466252 LOC107984156A0A0G2JMH3 177 aa14.07□□□□□ -0.16
SNX21-208ENST00000466252 A0A0J9YXY3 114 aa14.07□□□□□ -0.16
SNX21-208ENST00000466252 ARL17AQ8IVW1 177 aa14.07□□□□□ -0.16
SNX21-208ENST00000466252 GAGE10A6NGK3 116 aa14.06□□□□□ -0.16
SNX21-208ENST00000466252 RPL37AP8A6NKH3 93 aa14.06□□□□□ -0.16
SNX21-208ENST00000466252 NKAPP1Q8N9T2 125 aa14.06□□□□□ -0.16
SNX21-208ENST00000466252 ATOH7Q8N100 152 aa14.05□□□□□ -0.16
SNX21-208ENST00000466252 AKR1D1P51857 326 aa14.04□□□□□ -0.16
SNX21-208ENST00000466252 ANKRD39Q53RE8 183 aa14.04□□□□□ -0.16
SNX21-208ENST00000466252 FAT3Q8TDW7 4589 aa14.03□□□□□ -0.16
SNX21-208ENST00000466252 ADAMTSL4-AS1Q5T5F5 129 aa14.03□□□□□ -0.16
SNX21-208ENST00000466252 DAND5Q8N907 189 aa14.03□□□□□ -0.16
SNX21-208ENST00000466252 TTTY13Q9BZ97 58 aa14.03□□□□□ -0.16
SNX21-208ENST00000466252 IGLV1-50A0A075B6I6 118 aa14.02□□□□□ -0.17
SNX21-208ENST00000466252 BOD1L2Q8IYS8 172 aa14.01□□□□□ -0.17
SNX21-208ENST00000466252 LITAFQ99732 161 aa14□□□□□ -0.17
SNX21-208ENST00000466252 ZNF815PA8K554 130 aa13.98□□□□□ -0.17
SNX21-208ENST00000466252 M0R378 163 aa13.98□□□□□ -0.17
SNX21-208ENST00000466252 EIF4EBP3O60516 100 aaPredicted RBP13.98□□□□□ -0.17
SNX21-208ENST00000466252 BCE1O60756 84 aa13.97□□□□□ -0.17
SNX21-208ENST00000466252 TIMM17BO60830 172 aa13.97□□□□□ -0.17
SNX21-208ENST00000466252 SOSTDC1Q6X4U4 206 aa13.97□□□□□ -0.17
SNX21-208ENST00000466252 IGKV2-28A0A075B6P5 120 aa13.96□□□□□ -0.17
SNX21-208ENST00000466252 J3QL48 77 aa13.96□□□□□ -0.17
SNX21-208ENST00000466252 ZNF861PO60384 105 aa13.96□□□□□ -0.17
SNX21-208ENST00000466252 IGKV2D-28P01615 120 aa13.96□□□□□ -0.17
SNX21-208ENST00000466252 LINC01600Q96MT4 127 aa13.96□□□□□ -0.17
SNX21-208ENST00000466252 DMBT1Q9UGM3 2413 aaPredicted RBP13.96□□□□□ -0.17
SNX21-208ENST00000466252 MT1HL1P0DM35 61 aa13.95□□□□□ -0.18
SNX21-208ENST00000466252 DIRC1Q969H9 104 aa13.94□□□□□ -0.18
SNX21-208ENST00000466252 H0Y9J4 135 aa13.93□□□□□ -0.18
SNX21-208ENST00000466252 REG3GQ6UW15 175 aa13.93□□□□□ -0.18
SNX21-208ENST00000466252 PCP2Q8IVA1 136 aa13.93□□□□□ -0.18
SNX21-208ENST00000466252 NDUFC2O95298 119 aa13.92□□□□□ -0.18
SNX21-208ENST00000466252 KRTAP13-1Q8IUC0 172 aa13.92□□□□□ -0.18
SNX21-208ENST00000466252 TMEM238C9JI98 176 aa13.91□□□□□ -0.18
SNX21-208ENST00000466252 TMEM126AQ9H061 195 aa13.91□□□□□ -0.18
SNX21-208ENST00000466252 NCR3O14931 201 aa13.9□□□□□ -0.18
SNX21-208ENST00000466252 TRBV10-2A0A0K0K1G8 114 aa13.89□□□□□ -0.19
SNX21-208ENST00000466252 SCGB1D1O95968 90 aa13.89□□□□□ -0.19
SNX21-208ENST00000466252 KRTAP10-8P60410 259 aa13.89□□□□□ -0.19
SNX21-208ENST00000466252 LINC00308Q8TCZ7 52 aa13.89□□□□□ -0.19
SNX21-208ENST00000466252 MIEN1Q9BRT3 115 aa13.89□□□□□ -0.19
SNX21-208ENST00000466252 NPC2P61916 151 aa13.88□□□□□ -0.19
SNX21-208ENST00000466252 RPL28P46779 137 aaKnown RBP13.87□□□□□ -0.19
SNX21-208ENST00000466252 KCNQ1DNQ9H478 68 aa13.87□□□□□ -0.19
SNX21-208ENST00000466252 TRBV10-3A0A0K0K1G6 114 aa13.86□□□□□ -0.19
SNX21-208ENST00000466252 KRTAP1-4P0C5Y4 121 aa13.85□□□□□ -0.19
SNX21-208ENST00000466252 SPANXDQ9BXN6 97 aa13.85□□□□□ -0.19
SNX21-208ENST00000466252 SPANXCQ9NY87 97 aa13.85□□□□□ -0.19
SNX21-208ENST00000466252 HSBP1L1C9JCN9 74 aa13.84□□□□□ -0.19
SNX21-208ENST00000466252 SPRR1AP35321 89 aa13.84□□□□□ -0.19
SNX21-208ENST00000466252 SCGB1D4Q6XE38 83 aa13.84□□□□□ -0.19
SNX21-208ENST00000466252 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
SNX21-208ENST00000466252 TNXBP22105 4242 aa13.82□□□□□ -0.2
SNX21-208ENST00000466252 KRTAP4-16G5E9R7 235 aaPredicted RBP13.82□□□□□ -0.2
SNX21-208ENST00000466252 PRYO14603 147 aa13.82□□□□□ -0.2
SNX21-208ENST00000466252 UBE2AP49459 152 aa13.82□□□□□ -0.2
SNX21-208ENST00000466252 IGLV6-57P01721 117 aa13.81□□□□□ -0.2
SNX21-208ENST00000466252 FAM19A1Q7Z5A9 133 aa13.81□□□□□ -0.2
SNX21-208ENST00000466252 DDTP30046 118 aa13.8□□□□□ -0.2
SNX21-208ENST00000466252 PRLHP81277 87 aa13.8□□□□□ -0.2
SNX21-208ENST00000466252 JOSD1Q15040 202 aaPredicted RBP13.8□□□□□ -0.2
SNX21-208ENST00000466252 HERC1Q15751 4861 aa13.79□□□□□ -0.2
SNX21-208ENST00000466252 Q6ZVH6 145 aa13.79□□□□□ -0.2
SNX21-208ENST00000466252 LINC00337Q8N6G1 96 aa13.79□□□□□ -0.2
SNX21-208ENST00000466252 PPDPFQ9H3Y8 114 aa13.79□□□□□ -0.2
SNX21-208ENST00000466252 IFITM1P13164 125 aa13.77□□□□□ -0.21
SNX21-208ENST00000466252 TMA7Q9Y2S6 64 aaKnown RBP13.76□□□□□ -0.21
SNX21-208ENST00000466252 S100A7L2Q5SY68 101 aa13.75□□□□□ -0.21
SNX21-208ENST00000466252 MUSTN1Q8IVN3 82 aa13.75□□□□□ -0.21
SNX21-208ENST00000466252 PRR26Q8N8Z3 221 aa13.75□□□□□ -0.21
SNX21-208ENST00000466252 COX8AP10176 69 aa13.73□□□□□ -0.21
SNX21-208ENST00000466252 LINC00518Q8N0U6 118 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms