RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 H0YGX0 51 aa12.52□□□□□ -0.41
CAPN3-209ENST00000466222 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
CAPN3-209ENST00000466222 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
CAPN3-209ENST00000466222 Q8IZM0 81 aa12.51□□□□□ -0.41
CAPN3-209ENST00000466222 INAFM2P0DMQ5 153 aa12.5□□□□□ -0.41
CAPN3-209ENST00000466222 LINC01556Q5JQF7 62 aa12.5□□□□□ -0.41
CAPN3-209ENST00000466222 XCL1P47992 114 aa12.5□□□□□ -0.41
CAPN3-209ENST00000466222 NDUFV3P56181 108 aaKnown RBP12.5□□□□□ -0.41
CAPN3-209ENST00000466222 FAM218AQ96MZ4 157 aa12.5□□□□□ -0.41
CAPN3-209ENST00000466222 WWC2-AS2Q96NR7 200 aa12.5□□□□□ -0.41
CAPN3-209ENST00000466222 DNAH10OSP0CZ25 163 aa12.49□□□□□ -0.41
CAPN3-209ENST00000466222 C6orf226Q5I0X4 101 aa12.49□□□□□ -0.41
CAPN3-209ENST00000466222 PRR34Q9NV39 138 aa12.49□□□□□ -0.41
CAPN3-209ENST00000466222 TRBV7-7A0A0K0K1E9 115 aa12.48□□□□□ -0.41
CAPN3-209ENST00000466222 UBE2DNLQ8IWF7 75 aa12.48□□□□□ -0.41
CAPN3-209ENST00000466222 UPK3BQ9BT76 320 aa12.48□□□□□ -0.41
CAPN3-209ENST00000466222 SMIM11BQ8TCY0 68 aa12.47□□□□□ -0.41
CAPN3-209ENST00000466222 VPS13DQ5THJ4 4388 aa12.47□□□□□ -0.41
CAPN3-209ENST00000466222 MALP21145 153 aa12.47□□□□□ -0.41
CAPN3-209ENST00000466222 DNAL4O96015 105 aa12.46□□□□□ -0.42
CAPN3-209ENST00000466222 CHCHD10Q8WYQ3 142 aaPredicted RBP12.46□□□□□ -0.42
CAPN3-209ENST00000466222 IMUPQ9GZP8 106 aa12.46□□□□□ -0.42
CAPN3-209ENST00000466222 CXCL5P42830 114 aa12.45□□□□□ -0.42
CAPN3-209ENST00000466222 PFN2P35080 140 aa12.45□□□□□ -0.42
CAPN3-209ENST00000466222 KRTAP1-5Q9BYS1 174 aa12.45□□□□□ -0.42
CAPN3-209ENST00000466222 C22orf24Q9Y442 160 aa12.44□□□□□ -0.42
CAPN3-209ENST00000466222 Q9HAA7 133 aa12.43□□□□□ -0.42
CAPN3-209ENST00000466222 DNAH10Q8IVF4 4471 aa12.43□□□□□ -0.42
CAPN3-209ENST00000466222 CASC10Q5T4H9 136 aa12.43□□□□□ -0.42
CAPN3-209ENST00000466222 LINC00643Q86TS7 51 aa12.43□□□□□ -0.42
CAPN3-209ENST00000466222 KMT2AQ03164 3969 aa12.42□□□□□ -0.42
CAPN3-209ENST00000466222 COX17Q14061 63 aa12.42□□□□□ -0.42
CAPN3-209ENST00000466222 CD164L2Q6UWJ8 174 aa12.42□□□□□ -0.42
CAPN3-209ENST00000466222 SDIM1Q6ZPB5 146 aa12.42□□□□□ -0.42
CAPN3-209ENST00000466222 NDUFC2O95298 119 aa12.4□□□□□ -0.42
CAPN3-209ENST00000466222 A0A087WYN8 130 aa12.39□□□□□ -0.43
CAPN3-209ENST00000466222 A0A1B0GX51 115 aa12.39□□□□□ -0.43
CAPN3-209ENST00000466222 CFAP161Q6P656 301 aa12.39□□□□□ -0.43
CAPN3-209ENST00000466222 KRTAP26-1Q6PEX3 210 aa12.39□□□□□ -0.43
CAPN3-209ENST00000466222 OR13C6PQ8NH95 151 aa12.39□□□□□ -0.43
CAPN3-209ENST00000466222 IGKV2D-24A0A075B6R9 120 aa12.37□□□□□ -0.43
CAPN3-209ENST00000466222 KIAA0087Q14695 138 aa12.37□□□□□ -0.43
CAPN3-209ENST00000466222 OBSCN-AS1Q96MR7 158 aa12.37□□□□□ -0.43
CAPN3-209ENST00000466222 M0R2N4 97 aa12.34□□□□□ -0.43
CAPN3-209ENST00000466222 LECT2O14960 151 aa12.34□□□□□ -0.43
CAPN3-209ENST00000466222 C1orf43Q9BWL3 253 aa12.34□□□□□ -0.43
CAPN3-209ENST00000466222 SMCR5Q8TEV8 140 aa12.33□□□□□ -0.44
CAPN3-209ENST00000466222 GAGE2AQ6NT46 116 aa12.33□□□□□ -0.44
CAPN3-209ENST00000466222 LINC00167Q96N53 147 aa12.33□□□□□ -0.44
CAPN3-209ENST00000466222 DNAH2Q9P225 4427 aa12.32□□□□□ -0.44
CAPN3-209ENST00000466222 LINC00526Q96FQ7 95 aa12.32□□□□□ -0.44
CAPN3-209ENST00000466222 TMEM126AQ9H061 195 aa12.32□□□□□ -0.44
CAPN3-209ENST00000466222 ORMDL1Q9P0S3 153 aa12.32□□□□□ -0.44
CAPN3-209ENST00000466222 C3orf84H3BNL1 204 aa12.31□□□□□ -0.44
CAPN3-209ENST00000466222 LY6G6CO95867 125 aa12.31□□□□□ -0.44
CAPN3-209ENST00000466222 NBDYA0A0U1RRE5 68 aa12.31□□□□□ -0.44
CAPN3-209ENST00000466222 HYDINQ4G0P3 5121 aa12.28□□□□□ -0.44
CAPN3-209ENST00000466222 C6orf223Q8N319 242 aa12.28□□□□□ -0.44
CAPN3-209ENST00000466222 CCDC179H3BU77 68 aa12.27□□□□□ -0.44
CAPN3-209ENST00000466222 B5MCH6 92 aa12.27□□□□□ -0.45
CAPN3-209ENST00000466222 LINC00476Q8WZB0 136 aa12.27□□□□□ -0.45
CAPN3-209ENST00000466222 HIGD2BQ4VC39 106 aa12.26□□□□□ -0.45
CAPN3-209ENST00000466222 C14orf132Q9NPU4 83 aa12.26□□□□□ -0.45
CAPN3-209ENST00000466222 FAM236AA0A1B0GUQ0 79 aa12.25□□□□□ -0.45
CAPN3-209ENST00000466222 FAM236BA0A1B0GV22 79 aa12.25□□□□□ -0.45
CAPN3-209ENST00000466222 JMJD7-PLA2G4BH0Y9G9 81 aa12.25□□□□□ -0.45
CAPN3-209ENST00000466222 C15orf56Q8N910 161 aa12.25□□□□□ -0.45
CAPN3-209ENST00000466222 Q8N814 137 aa12.25□□□□□ -0.45
CAPN3-209ENST00000466222 ALMS1Q8TCU4 4167 aa12.24□□□□□ -0.45
CAPN3-209ENST00000466222 TMEM256-PLSCR3K7ERE1 68 aa12.23□□□□□ -0.45
CAPN3-209ENST00000466222 SPAG11BQ08648 103 aa12.23□□□□□ -0.45
CAPN3-209ENST00000466222 Q6JHZ5 121 aa12.23□□□□□ -0.45
CAPN3-209ENST00000466222 C9orf129Q5T035 196 aaKnown RBP12.22□□□□□ -0.45
CAPN3-209ENST00000466222 C10orf25Q5T742 122 aa12.21□□□□□ -0.45
CAPN3-209ENST00000466222 GVQW2A0A096LPI5 108 aaPredicted RBP12.21□□□□□ -0.46
CAPN3-209ENST00000466222 SLPIP03973 132 aa12.21□□□□□ -0.46
CAPN3-209ENST00000466222 RMI2Q96E14 147 aa12.21□□□□□ -0.46
CAPN3-209ENST00000466222 SACSQ9NZJ4 4579 aa12.2□□□□□ -0.46
CAPN3-209ENST00000466222 NCR3O14931 201 aa12.2□□□□□ -0.46
CAPN3-209ENST00000466222 Q6ZR54 194 aa12.2□□□□□ -0.46
CAPN3-209ENST00000466222 USP17L23D6RBM5 183 aa12.19□□□□□ -0.46
CAPN3-209ENST00000466222 CCKP06307 115 aa12.19□□□□□ -0.46
CAPN3-209ENST00000466222 PRR3P79522 188 aaKnown RBP12.19□□□□□ -0.46
CAPN3-209ENST00000466222 S100A7L2Q5SY68 101 aa12.19□□□□□ -0.46
CAPN3-209ENST00000466222 UNQ6190/PRO20217Q6UXQ8 127 aa12.19□□□□□ -0.46
CAPN3-209ENST00000466222 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
CAPN3-209ENST00000466222 PSCAO43653 123 aa12.18□□□□□ -0.46
CAPN3-209ENST00000466222 C9orf116Q5BN46 136 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-209ENST00000466222 SS18L2Q9UHA2 77 aa12.18□□□□□ -0.46
CAPN3-209ENST00000466222 ZNF561-AS1K7EIQ3 104 aa12.17□□□□□ -0.46
CAPN3-209ENST00000466222 LINC00846Q9NV44 126 aa12.17□□□□□ -0.46
CAPN3-209ENST00000466222 H3BQ85 93 aa12.16□□□□□ -0.46
CAPN3-209ENST00000466222 HIST1H4AP62805 103 aaKnown RBP12.16□□□□□ -0.46
CAPN3-209ENST00000466222 C6orf99Q4VX62 202 aa12.16□□□□□ -0.46
CAPN3-209ENST00000466222 LINC00575Q6W349 94 aa12.15□□□□□ -0.46
CAPN3-209ENST00000466222 KMT2CQ8NEZ4 4911 aaKnown RBP12.15□□□□□ -0.46
CAPN3-209ENST00000466222 ATOX1O00244 68 aa12.13□□□□□ -0.47
CAPN3-209ENST00000466222 IGLV6-57P01721 117 aa12.13□□□□□ -0.47
CAPN3-209ENST00000466222 DNAH6Q9C0G6 4158 aa12.13□□□□□ -0.47
CAPN3-209ENST00000466222 UQCRQO14949 82 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms