RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 C2orf91Q6ZV80 131 aa7.06□□□□□ -1.28
VCP-204ENST00000466100 KRTAP7-1Q8IUC3 87 aa7.06□□□□□ -1.28
VCP-204ENST00000466100 LINC00518Q8N0U6 118 aa7.06□□□□□ -1.28
VCP-204ENST00000466100 SPANXDQ9BXN6 97 aa7.06□□□□□ -1.28
VCP-204ENST00000466100 SPANXCQ9NY87 97 aa7.06□□□□□ -1.28
VCP-204ENST00000466100 LINC00474Q9P2X8 69 aa7.06□□□□□ -1.28
VCP-204ENST00000466100 LOC107984156A0A0G2JMH3 177 aa7.05□□□□□ -1.28
VCP-204ENST00000466100 TMEM238C9JI98 176 aa7.05□□□□□ -1.28
VCP-204ENST00000466100 EIF4EBP3O60516 100 aaPredicted RBP7.05□□□□□ -1.28
VCP-204ENST00000466100 SOSTDC1Q6X4U4 206 aa7.05□□□□□ -1.28
VCP-204ENST00000466100 ARL17AQ8IVW1 177 aa7.05□□□□□ -1.28
VCP-204ENST00000466100 Q8NDZ9 215 aa7.05□□□□□ -1.28
VCP-204ENST00000466100 A0A087WYN8 130 aa7.04□□□□□ -1.28
VCP-204ENST00000466100 A0A1W2PNN7 141 aa7.04□□□□□ -1.28
VCP-204ENST00000466100 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
VCP-204ENST00000466100 SPANXB1Q9NS25 103 aaPredicted RBP7.04□□□□□ -1.28
VCP-204ENST00000466100 HIGD1BQ9P298 99 aa7.04□□□□□ -1.28
VCP-204ENST00000466100 PLA2G2DQ9UNK4 145 aa7.04□□□□□ -1.28
VCP-204ENST00000466100 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
VCP-204ENST00000466100 SCXQ7RTU7 201 aa7.03□□□□□ -1.28
VCP-204ENST00000466100 CIRBP-AS1Q8TBR5 109 aa7.03□□□□□ -1.28
VCP-204ENST00000466100 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
VCP-204ENST00000466100 PPDPFQ9H3Y8 114 aa7.03□□□□□ -1.28
VCP-204ENST00000466100 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
VCP-204ENST00000466100 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
VCP-204ENST00000466100 VPREB1P12018 145 aa7.02□□□□□ -1.29
VCP-204ENST00000466100 XGP55808 180 aa7.02□□□□□ -1.29
VCP-204ENST00000466100 Q6ZVH6 145 aa7.02□□□□□ -1.29
VCP-204ENST00000466100 PRO1933Q9H354 126 aa7.02□□□□□ -1.29
VCP-204ENST00000466100 UQCR10Q9UDW1 63 aa7.02□□□□□ -1.29
VCP-204ENST00000466100 HERC2O95714 4834 aa7.02□□□□□ -1.29
VCP-204ENST00000466100 NPC2P61916 151 aa7.01□□□□□ -1.29
VCP-204ENST00000466100 HAMPP81172 84 aa7.01□□□□□ -1.29
VCP-204ENST00000466100 CDK2AP2O75956 126 aa7□□□□□ -1.29
VCP-204ENST00000466100 IFITM1P13164 125 aa7□□□□□ -1.29
VCP-204ENST00000466100 FAM19A5Q7Z5A7 132 aaPredicted RBP7□□□□□ -1.29
VCP-204ENST00000466100 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
VCP-204ENST00000466100 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
VCP-204ENST00000466100 PKHD1L1Q86WI1 4243 aa6.99□□□□□ -1.29
VCP-204ENST00000466100 MUSTN1Q8IVN3 82 aa6.99□□□□□ -1.29
VCP-204ENST00000466100 M0QXV9 152 aa6.98□□□□□ -1.29
VCP-204ENST00000466100 NDUFC2O95298 119 aa6.98□□□□□ -1.29
VCP-204ENST00000466100 C22orf24Q9Y442 160 aa6.98□□□□□ -1.29
VCP-204ENST00000466100 PRR3P79522 188 aaKnown RBP6.97□□□□□ -1.29
VCP-204ENST00000466100 RPL24P83731 157 aaKnown RBP6.97□□□□□ -1.29
VCP-204ENST00000466100 SRSF9Q13242 221 aaKnown RBP eCLIP6.97□□□□□ -1.29
VCP-204ENST00000466100 PHF5AQ7RTV0 110 aaKnown RBP6.97□□□□□ -1.29
VCP-204ENST00000466100 DPH3Q96FX2 82 aa6.97□□□□□ -1.29
VCP-204ENST00000466100 HIST1H4GQ99525 98 aa6.97□□□□□ -1.29
VCP-204ENST00000466100 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.3
VCP-204ENST00000466100 IGKV2D-28P01615 120 aa6.96□□□□□ -1.3
VCP-204ENST00000466100 TAL2Q16559 108 aa6.96□□□□□ -1.3
VCP-204ENST00000466100 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
VCP-204ENST00000466100 COPS9Q8WXC6 57 aa6.96□□□□□ -1.3
VCP-204ENST00000466100 TRBV10-2A0A0K0K1G8 114 aa6.95□□□□□ -1.3
VCP-204ENST00000466100 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
VCP-204ENST00000466100 NCR3O14931 201 aa6.95□□□□□ -1.3
VCP-204ENST00000466100 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
VCP-204ENST00000466100 HSD52Q0P140 79 aa6.95□□□□□ -1.3
VCP-204ENST00000466100 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
VCP-204ENST00000466100 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
VCP-204ENST00000466100 NKAPP1Q8N9T2 125 aa6.95□□□□□ -1.3
VCP-204ENST00000466100 M0R378 163 aa6.94□□□□□ -1.3
VCP-204ENST00000466100 CEND1Q8N111 149 aa6.94□□□□□ -1.3
VCP-204ENST00000466100 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
VCP-204ENST00000466100 A4D1N5 150 aa6.93□□□□□ -1.3
VCP-204ENST00000466100 LINC00337Q8N6G1 96 aa6.93□□□□□ -1.3
VCP-204ENST00000466100 GAGE10A6NGK3 116 aa6.92□□□□□ -1.3
VCP-204ENST00000466100 FXYD2P54710 66 aa6.92□□□□□ -1.3
VCP-204ENST00000466100 LBHQ53QV2 105 aaPredicted RBP6.92□□□□□ -1.3
VCP-204ENST00000466100 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
VCP-204ENST00000466100 IGLV1-50A0A075B6I6 118 aa6.91□□□□□ -1.3
VCP-204ENST00000466100 IGLV6-57P01721 117 aa6.91□□□□□ -1.3
VCP-204ENST00000466100 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.3
VCP-204ENST00000466100 RPL37AP8A6NKH3 93 aa6.9□□□□□ -1.3
VCP-204ENST00000466100 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.3
VCP-204ENST00000466100 DDTP30046 118 aa6.9□□□□□ -1.3
VCP-204ENST00000466100 CTAG1AP78358 180 aa6.9□□□□□ -1.3
VCP-204ENST00000466100 LINC00528Q8N1L1 170 aa6.9□□□□□ -1.3
VCP-204ENST00000466100 CFC1BP0CG36 223 aa6.89□□□□□ -1.31
VCP-204ENST00000466100 CFC1P0CG37 223 aa6.89□□□□□ -1.31
VCP-204ENST00000466100 KRTAP10-4P60372 401 aaPredicted RBP6.89□□□□□ -1.31
VCP-204ENST00000466100 UBE2BP63146 152 aa6.89□□□□□ -1.31
VCP-204ENST00000466100 PSORS1C2Q9UIG4 136 aa6.89□□□□□ -1.31
VCP-204ENST00000466100 A0A0B4J2C4 111 aa6.88□□□□□ -1.31
VCP-204ENST00000466100 BVES-AS1Q5T3Y7 98 aa6.88□□□□□ -1.31
VCP-204ENST00000466100 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
VCP-204ENST00000466100 TRAV13-2A0A0B4J235 113 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 TMEM238LA0A1B0GVL6 79 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 A6NJY4 79 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 PRYO14603 147 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 SPRR1AP35321 89 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 S100A7L2Q5SY68 101 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 TMEM126AQ9H061 195 aa6.87□□□□□ -1.31
VCP-204ENST00000466100 KRTAP4-16G5E9R7 235 aaPredicted RBP6.86□□□□□ -1.31
VCP-204ENST00000466100 ABCA13Q86UQ4 5058 aa6.86□□□□□ -1.31
VCP-204ENST00000466100 FAT3Q8TDW7 4589 aa6.85□□□□□ -1.31
VCP-204ENST00000466100 TRAV23DV6A0A075B6W5 121 aa6.85□□□□□ -1.31
VCP-204ENST00000466100 M0R143 59 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms