RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 LY6G6CO95867 125 aa3.57□□□□□ -1.84
VPS41-211ENST00000466017 CNBPP62633 177 aaKnown RBP3.57□□□□□ -1.84
VPS41-211ENST00000466017 LBHQ53QV2 105 aaPredicted RBP3.57□□□□□ -1.84
VPS41-211ENST00000466017 CEND1Q8N111 149 aa3.57□□□□□ -1.84
VPS41-211ENST00000466017 CSMD3Q7Z407 3707 aa3.57□□□□□ -1.84
VPS41-211ENST00000466017 IGLV5-52A0A0A0MRZ9 124 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 PSCAO43653 123 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
VPS41-211ENST00000466017 SYCNQ0VAF6 134 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 SRSF9Q13242 221 aaKnown RBP eCLIP3.56□□□□□ -1.84
VPS41-211ENST00000466017 BVES-AS1Q5T3Y7 98 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 ADAMTSL4-AS1Q5T5F5 129 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 C1orf134Q5TEV5 83 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 C2orf82Q6UX34 121 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 UNQ6190/PRO20217Q6UXQ8 127 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 CAMK2N2Q96S95 79 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 ERG28Q9UKR5 140 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
VPS41-211ENST00000466017 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 LCE6AA0A183 80 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 A0A1B0GWB2 263 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 PCP4L1A6NKN8 68 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 NDUFC2-KCTD14E9PQ53 114 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 NDUFC2O95298 119 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 SMIM13P0DJ93 91 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 LINC00158P58513 81 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 RPL24P83731 157 aaKnown RBP3.55□□□□□ -1.84
VPS41-211ENST00000466017 Q6ZRU5 148 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 MUSTN1Q8IVN3 82 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 C9orf163Q8N9P6 203 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 LINC00308Q8TCZ7 52 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 SNHG12Q9BXW3 62 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 C6orf48Q9UBA6 75 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 PKIGQ9Y2B9 76 aa3.55□□□□□ -1.84
VPS41-211ENST00000466017 A0A087WTM6 91 aa3.54□□□□□ -1.84
VPS41-211ENST00000466017 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.54□□□□□ -1.84
VPS41-211ENST00000466017 M0R2N4 97 aa3.54□□□□□ -1.84
VPS41-211ENST00000466017 HIGD2BQ4VC39 106 aa3.54□□□□□ -1.84
VPS41-211ENST00000466017 MIR7-3HGQ8N6C7 128 aa3.54□□□□□ -1.84
VPS41-211ENST00000466017 Q8N814 137 aa3.54□□□□□ -1.84
VPS41-211ENST00000466017 CARD19Q96LW7 228 aa3.54□□□□□ -1.84
VPS41-211ENST00000466017 DNAH17Q9UFH2 4485 aa3.54□□□□□ -1.84
VPS41-211ENST00000466017 SACSQ9NZJ4 4579 aa3.53□□□□□ -1.84
VPS41-211ENST00000466017 A0A0B4J2C4 111 aa3.53□□□□□ -1.84
VPS41-211ENST00000466017 A6NDN8 102 aa3.53□□□□□ -1.84
VPS41-211ENST00000466017 HINT1P49773 126 aaPredicted RBP3.53□□□□□ -1.84
VPS41-211ENST00000466017 FXYD2P54710 66 aa3.53□□□□□ -1.84
VPS41-211ENST00000466017 WFDC2Q14508 124 aa3.53□□□□□ -1.84
VPS41-211ENST00000466017 SOSTDC1Q6X4U4 206 aa3.53□□□□□ -1.84
VPS41-211ENST00000466017 TRBV10-2A0A0K0K1G8 114 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 LOC107984640A0A0U1RRK4 108 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 A4D1N5 150 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 RTL8CO15255 209 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 CFC1BP0CG36 223 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 CFC1P0CG37 223 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 PFN2P35080 140 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
VPS41-211ENST00000466017 COL5A1-AS1Q5SY13 56 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 LINC00336Q6ZUF6 198 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 LINC00526Q96FQ7 95 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 KMT2AQ03164 3969 aa3.52□□□□□ -1.85
VPS41-211ENST00000466017 IGLV5-37A0A075B6J1 123 aa3.51□□□□□ -1.85
VPS41-211ENST00000466017 TRAV13-2A0A0B4J235 113 aa3.51□□□□□ -1.85
VPS41-211ENST00000466017 C16orf90A8MZG2 172 aa3.51□□□□□ -1.85
VPS41-211ENST00000466017 EPM2AB3EWF7 344 aa3.51□□□□□ -1.85
VPS41-211ENST00000466017 C9orf116Q5BN46 136 aaPredicted RBP3.51□□□□□ -1.85
VPS41-211ENST00000466017 SDIM1Q6ZPB5 146 aa3.51□□□□□ -1.85
VPS41-211ENST00000466017 Q6ZRP5 223 aa3.51□□□□□ -1.85
VPS41-211ENST00000466017 PRO1854Q9UHT4 67 aa3.51□□□□□ -1.85
VPS41-211ENST00000466017 DNAH10Q8IVF4 4471 aa3.5□□□□□ -1.85
VPS41-211ENST00000466017 A0A0U1RRA0 63 aa3.5□□□□□ -1.85
VPS41-211ENST00000466017 LECT2O14960 151 aa3.5□□□□□ -1.85
VPS41-211ENST00000466017 DAND5Q8N907 189 aa3.5□□□□□ -1.85
VPS41-211ENST00000466017 LINC00474Q9P2X8 69 aa3.5□□□□□ -1.85
VPS41-211ENST00000466017 CBY1Q9Y3M2 126 aa3.5□□□□□ -1.85
VPS41-211ENST00000466017 IGKV2-28A0A075B6P5 120 aa3.49□□□□□ -1.85
VPS41-211ENST00000466017 TAX1BP3O14907 124 aa3.49□□□□□ -1.85
VPS41-211ENST00000466017 IGKV2D-28P01615 120 aa3.49□□□□□ -1.85
VPS41-211ENST00000466017 VPREB1P12018 145 aa3.49□□□□□ -1.85
VPS41-211ENST00000466017 C9orf129Q5T035 196 aaKnown RBP3.49□□□□□ -1.85
VPS41-211ENST00000466017 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
VPS41-211ENST00000466017 TMEM126AQ9H061 195 aa3.49□□□□□ -1.85
VPS41-211ENST00000466017 NHP2Q9NX24 153 aaKnown RBP3.49□□□□□ -1.85
VPS41-211ENST00000466017 M0R378 163 aa3.48□□□□□ -1.85
VPS41-211ENST00000466017 RPL28P46779 137 aaKnown RBP3.48□□□□□ -1.85
VPS41-211ENST00000466017 RAB37Q96AX2 223 aa3.48□□□□□ -1.85
VPS41-211ENST00000466017 LYSTQ99698 3801 aa3.48□□□□□ -1.85
VPS41-211ENST00000466017 TGP01266 2768 aa3.48□□□□□ -1.85
VPS41-211ENST00000466017 HYDINQ4G0P3 5121 aa3.48□□□□□ -1.85
VPS41-211ENST00000466017 TENM2Q9NT68 2774 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 DNAH8Q96JB1 4490 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.47□□□□□ -1.85
VPS41-211ENST00000466017 IGLV6-57P01721 117 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 NPC2P61916 151 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 BATFQ16520 125 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 GAGE2EQ4V326 116 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 XAGE1AQ9HD64 81 aa3.47□□□□□ -1.85
VPS41-211ENST00000466017 GAGE2DQ9UEU5 116 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms