RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 LINC00167Q96N53 147 aa15.8■□□□□ 0.12
SMC4-206ENST00000465903 NDUFA12Q9UI09 145 aa15.79■□□□□ 0.12
SMC4-206ENST00000465903 LINC00158P58513 81 aa15.78■□□□□ 0.12
SMC4-206ENST00000465903 LINC01600Q96MT4 127 aa15.78■□□□□ 0.12
SMC4-206ENST00000465903 A0A0U1RRA0 63 aa15.77■□□□□ 0.12
SMC4-206ENST00000465903 VPREB1P12018 145 aa15.77■□□□□ 0.12
SMC4-206ENST00000465903 HERV-K104P63124 156 aa15.77■□□□□ 0.12
SMC4-206ENST00000465903 Q8NDZ9 215 aa15.77■□□□□ 0.12
SMC4-206ENST00000465903 PLEKHB2Q96CS7 222 aa15.77■□□□□ 0.12
SMC4-206ENST00000465903 TNXBP22105 4242 aa15.76■□□□□ 0.11
SMC4-206ENST00000465903 SMIM13P0DJ93 91 aa15.76■□□□□ 0.11
SMC4-206ENST00000465903 HERVK_113P61574 105 aa15.75■□□□□ 0.11
SMC4-206ENST00000465903 REG3GQ6UW15 175 aa15.75■□□□□ 0.11
SMC4-206ENST00000465903 MYMXA0A1B0GTQ4 84 aa15.74■□□□□ 0.11
SMC4-206ENST00000465903 GAGE10A6NGK3 116 aa15.74■□□□□ 0.11
SMC4-206ENST00000465903 RPL37AP8A6NKH3 93 aa15.74■□□□□ 0.11
SMC4-206ENST00000465903 LINC01545Q5VT33 79 aa15.74■□□□□ 0.11
SMC4-206ENST00000465903 PET117Q6UWS5 81 aa15.74■□□□□ 0.11
SMC4-206ENST00000465903 NKAPP1Q8N9T2 125 aa15.74■□□□□ 0.11
SMC4-206ENST00000465903 J3QQQ9 107 aa15.73■□□□□ 0.11
SMC4-206ENST00000465903 C3orf79P0CE67 100 aa15.73■□□□□ 0.11
SMC4-206ENST00000465903 MEIG1Q5JSS6 88 aa15.73■□□□□ 0.11
SMC4-206ENST00000465903 RPL24P83731 157 aaKnown RBP15.7■□□□□ 0.1
SMC4-206ENST00000465903 DIRC1Q969H9 104 aa15.7■□□□□ 0.1
SMC4-206ENST00000465903 H0Y9J4 135 aa15.69■□□□□ 0.1
SMC4-206ENST00000465903 MIR7-3HGQ8N6C7 128 aa15.69■□□□□ 0.1
SMC4-206ENST00000465903 LINC00587B1AMM8 73 aa15.68■□□□□ 0.1
SMC4-206ENST00000465903 E9PLD3 99 aa15.68■□□□□ 0.1
SMC4-206ENST00000465903 KRTAP10-8P60410 259 aa15.68■□□□□ 0.1
SMC4-206ENST00000465903 LGALS3P17931 250 aaKnown RBP15.67■□□□□ 0.1
SMC4-206ENST00000465903 ZNF861PO60384 105 aa15.66■□□□□ 0.1
SMC4-206ENST00000465903 BCE1O60756 84 aa15.66■□□□□ 0.1
SMC4-206ENST00000465903 NMUP48645 174 aa15.66■□□□□ 0.1
SMC4-206ENST00000465903 IGLV1-50A0A075B6I6 118 aa15.65■□□□□ 0.1
SMC4-206ENST00000465903 KRTDAPP60985 99 aa15.64■□□□□ 0.09
SMC4-206ENST00000465903 IGKV2-28A0A075B6P5 120 aa15.63■□□□□ 0.09
SMC4-206ENST00000465903 IGKV2D-28P01615 120 aa15.63■□□□□ 0.09
SMC4-206ENST00000465903 BOD1L2Q8IYS8 172 aa15.61■□□□□ 0.09
SMC4-206ENST00000465903 DAND5Q8N907 189 aa15.61■□□□□ 0.09
SMC4-206ENST00000465903 KRTAP1-4P0C5Y4 121 aa15.6■□□□□ 0.09
SMC4-206ENST00000465903 LOC107984156A0A0G2JMH3 177 aa15.59■□□□□ 0.09
SMC4-206ENST00000465903 ARL17AQ8IVW1 177 aa15.59■□□□□ 0.09
SMC4-206ENST00000465903 A0A0J9YXY3 114 aa15.58■□□□□ 0.08
SMC4-206ENST00000465903 M0R378 163 aa15.58■□□□□ 0.08
SMC4-206ENST00000465903 KRTAP13-1Q8IUC0 172 aa15.58■□□□□ 0.08
SMC4-206ENST00000465903 HIST3H2BBQ8N257 126 aa15.58■□□□□ 0.08
SMC4-206ENST00000465903 IGKV2D-26A0A0A0MRZ7 120 aa15.57■□□□□ 0.08
SMC4-206ENST00000465903 TMEM238C9JI98 176 aa15.57■□□□□ 0.08
SMC4-206ENST00000465903 RPL28P46779 137 aaKnown RBP15.56■□□□□ 0.08
SMC4-206ENST00000465903 TMEM126AQ9H061 195 aa15.56■□□□□ 0.08
SMC4-206ENST00000465903 ADAMTSL4-AS1Q5T5F5 129 aa15.54■□□□□ 0.08
SMC4-206ENST00000465903 NCR3O14931 201 aa15.53■□□□□ 0.08
SMC4-206ENST00000465903 PRR26Q8N8Z3 221 aa15.53■□□□□ 0.08
SMC4-206ENST00000465903 TTTY13Q9BZ97 58 aa15.52■□□□□ 0.08
SMC4-206ENST00000465903 C20orf202A1L168 122 aa15.51■□□□□ 0.07
SMC4-206ENST00000465903 UBE2AP49459 152 aa15.51■□□□□ 0.07
SMC4-206ENST00000465903 HIST1H2BLQ99880 126 aa15.51■□□□□ 0.07
SMC4-206ENST00000465903 SOSTDC1Q6X4U4 206 aa15.5■□□□□ 0.07
SMC4-206ENST00000465903 EIF4EBP3O60516 100 aaPredicted RBP15.49■□□□□ 0.07
SMC4-206ENST00000465903 ANKRD39Q53RE8 183 aa15.49■□□□□ 0.07
SMC4-206ENST00000465903 ATOH7Q8N100 152 aa15.49■□□□□ 0.07
SMC4-206ENST00000465903 LITAFQ99732 161 aa15.49■□□□□ 0.07
SMC4-206ENST00000465903 HMCN2Q8NDA2 5059 aa15.49■□□□□ 0.07
SMC4-206ENST00000465903 PRLHP81277 87 aa15.48■□□□□ 0.07
SMC4-206ENST00000465903 FAM19A1Q7Z5A9 133 aa15.48■□□□□ 0.07
SMC4-206ENST00000465903 ZNF815PA8K554 130 aa15.47■□□□□ 0.07
SMC4-206ENST00000465903 S100A6P06703 90 aa15.47■□□□□ 0.07
SMC4-206ENST00000465903 S100A2P29034 98 aa15.47■□□□□ 0.07
SMC4-206ENST00000465903 TRBV10-3A0A0K0K1G6 114 aa15.45■□□□□ 0.06
SMC4-206ENST00000465903 NPC2P61916 151 aa15.45■□□□□ 0.06
SMC4-206ENST00000465903 PRYO14603 147 aa15.44■□□□□ 0.06
SMC4-206ENST00000465903 TIMM17BO60830 172 aa15.44■□□□□ 0.06
SMC4-206ENST00000465903 MIEN1Q9BRT3 115 aa15.44■□□□□ 0.06
SMC4-206ENST00000465903 KCNQ1DNQ9H478 68 aa15.44■□□□□ 0.06
SMC4-206ENST00000465903 TRBV10-2A0A0K0K1G8 114 aa15.43■□□□□ 0.06
SMC4-206ENST00000465903 NDUFC2O95298 119 aa15.43■□□□□ 0.06
SMC4-206ENST00000465903 SNRPEP62304 92 aaKnown RBP15.43■□□□□ 0.06
SMC4-206ENST00000465903 SPRR1AP35321 89 aa15.42■□□□□ 0.06
SMC4-206ENST00000465903 AKR1D1P51857 326 aa15.41■□□□□ 0.06
SMC4-206ENST00000465903 SPANXB1Q9NS25 103 aaPredicted RBP15.4■□□□□ 0.06
SMC4-206ENST00000465903 KRTAP4-16G5E9R7 235 aaPredicted RBP15.39■□□□□ 0.05
SMC4-206ENST00000465903 LINC00308Q8TCZ7 52 aa15.39■□□□□ 0.05
SMC4-206ENST00000465903 C5orf52A6NGY3 159 aa15.38■□□□□ 0.05
SMC4-206ENST00000465903 DDTP30046 118 aa15.38■□□□□ 0.05
SMC4-206ENST00000465903 LINC00337Q8N6G1 96 aa15.37■□□□□ 0.05
SMC4-206ENST00000465903 ANAPC11Q9NYG5 84 aa15.37■□□□□ 0.05
SMC4-206ENST00000465903 A0A087X002 238 aa15.36■□□□□ 0.05
SMC4-206ENST00000465903 PCP2Q8IVA1 136 aa15.36■□□□□ 0.05
SMC4-206ENST00000465903 RPL13AP40429 203 aaKnown RBP15.35■□□□□ 0.05
SMC4-206ENST00000465903 IGLV6-57P01721 117 aa15.34■□□□□ 0.05
SMC4-206ENST00000465903 HIGD2AQ9BW72 106 aa15.34■□□□□ 0.05
SMC4-206ENST00000465903 SPANXCQ9NY87 97 aa15.32■□□□□ 0.04
SMC4-206ENST00000465903 SCGB1D4Q6XE38 83 aa15.31■□□□□ 0.04
SMC4-206ENST00000465903 SPANXDQ9BXN6 97 aa15.31■□□□□ 0.04
SMC4-206ENST00000465903 ETDCA0A1B0GVM5 59 aa15.3■□□□□ 0.04
SMC4-206ENST00000465903 CRYGAP11844 174 aa15.3■□□□□ 0.04
SMC4-206ENST00000465903 S100A7L2Q5SY68 101 aa15.3■□□□□ 0.04
SMC4-206ENST00000465903 S100A12P80511 92 aa15.29■□□□□ 0.04
SMC4-206ENST00000465903 B5MCH6 92 aa15.28■□□□□ 0.04
SMC4-206ENST00000465903 FAM229BQ4G0N7 80 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms