RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SEC11AP67812 179 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 RPL18AQ02543 176 aaKnown RBP2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 TEX43Q6ZNM6 134 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 Q6ZRP5 223 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 ERASQ7Z444 233 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 OR10D4PQ8NGN7 298 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 SCGB3A1Q96QR1 104 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 HSPB8Q9UJY1 196 aa2.96□□□□□ -1.94
EXOSC3-204ENST00000465860 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 LOC107984640A0A0U1RRK4 108 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BKO60814 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 SERF1AO75920 110 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 S100A6P06703 90 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BJP06899 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 MT1HL1P0DM35 61 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BOP23527 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BBP33778 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BDP58876 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BCP62807 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 PRR3P79522 188 aaKnown RBP2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST2H2BEQ16778 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 PHF5AQ7RTV0 110 aaKnown RBP2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BHQ93079 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 PACRGQ96M98 296 aaPredicted RBP2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BNQ99877 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 HIST1H2BMQ99879 126 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 VCX2Q9H322 139 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 CST9LQ9H4G1 147 aa2.95□□□□□ -1.94
EXOSC3-204ENST00000465860 NDUFA1O15239 70 aa2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 AKR1D1P51857 326 aa2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 DSCR10P59022 87 aa2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 LBHQ53QV2 105 aaPredicted RBP2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 PDZD11Q5EBL8 140 aa2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 C9orf129Q5T035 196 aaKnown RBP2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 LINC00469Q8N7U9 141 aa2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 GEMIN7Q9H840 131 aaKnown RBP2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 MRPL35Q9NZE8 188 aaKnown RBP2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 TOMM7Q9P0U1 55 aa2.94□□□□□ -1.94
EXOSC3-204ENST00000465860 TINCRA0A1B0GVN0 87 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 C20orf202A1L168 122 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 H3BRM9 83 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 NUPR1O60356 82 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 SPINK8P0C7L1 97 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 TLX1NBP0CAT3 122 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 S100A2P29034 98 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 HERVK_113P63121 156 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 SRSF9Q13242 221 aaKnown RBP eCLIP2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 PMVKQ15126 192 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 COA6Q5JTJ3 125 aaKnown RBP2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 FAM19A5Q7Z5A7 132 aaPredicted RBP2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 Q8IZM0 81 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 LINC01561Q8N1V8 128 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 IFI27L1Q96BM0 104 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 MAP1LC3CQ9BXW4 147 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 PSORS1C2Q9UIG4 136 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 PKIGQ9Y2B9 76 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 UBR4Q5T4S7 5183 aa2.93□□□□□ -1.94
EXOSC3-204ENST00000465860 TRAV12-1A0A0B4J245 112 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 TRBV30A0A0K0K1B3 111 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 OXTP01178 125 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 IGLC3P0DOY3 106 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 ZNF22P17026 224 aaPredicted RBP2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 PLNP26678 52 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 NDUFA6P56556 154 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 C6orf226Q5I0X4 101 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 FAM19A2Q8N3H0 131 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 C7orf33Q8WU49 177 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 LINC00474Q9P2X8 69 aa2.92□□□□□ -1.94
EXOSC3-204ENST00000465860 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
EXOSC3-204ENST00000465860 NDUFC2-KCTD14E9PQ53 114 aa2.91□□□□□ -1.94
EXOSC3-204ENST00000465860 F8WDY8 70 aa2.91□□□□□ -1.94
EXOSC3-204ENST00000465860 HERVK_113P61574 105 aa2.91□□□□□ -1.94
EXOSC3-204ENST00000465860 Q8NDZ9 215 aa2.91□□□□□ -1.94
EXOSC3-204ENST00000465860 COX7B2Q8TF08 81 aa2.91□□□□□ -1.94
EXOSC3-204ENST00000465860 F8VRH5 84 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 H0Y8G0 127 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 M0QXV9 152 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 DPM2O94777 84 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 FABP4P15090 132 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 CXCL5P42830 114 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 CKS1BP61024 79 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 SFTA2Q6UW10 78 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 CHTOPQ9Y3Y2 248 aaKnown RBP2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 LPAP08519 4548 aa2.9□□□□□ -1.95
EXOSC3-204ENST00000465860 SYS1-DBNDD2H3BUS1 97 aa2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 KRTAP10-8P60410 259 aa2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 KRTDAPP60985 99 aa2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 TMEM170BQ5T4T1 132 aa2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 HIST3H2BBQ8N257 126 aa2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 ZNF625Q96I27 306 aaPredicted RBP2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 LINC01600Q96MT4 127 aa2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 C22orf24Q9Y442 160 aa2.89□□□□□ -1.95
EXOSC3-204ENST00000465860 LRP2P98164 4655 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms