RNA–Protein interactions for RNA: ENST00000465673.5

GPNMB-206, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 793 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-206ENST00000465673 ANAPC16Q96DE5 110 aa5.75□□□□□ -1.49
GPNMB-206ENST00000465673 GNB1LQ9BYB4 327 aa5.75□□□□□ -1.49
GPNMB-206ENST00000465673 MRPL18Q9H0U6 180 aaKnown RBP5.74□□□□□ -1.49
GPNMB-206ENST00000465673 A0A1B0GVG6 124 aa5.73□□□□□ -1.49
GPNMB-206ENST00000465673 H3BRM9 83 aa5.73□□□□□ -1.49
GPNMB-206ENST00000465673 KRTAP19-2Q3LHN2 52 aa5.73□□□□□ -1.49
GPNMB-206ENST00000465673 SMCR5Q8TEV8 140 aa5.73□□□□□ -1.49
GPNMB-206ENST00000465673 A0A0U1RRA0 63 aa5.72□□□□□ -1.49
GPNMB-206ENST00000465673 SPINK1P00995 79 aa5.72□□□□□ -1.49
GPNMB-206ENST00000465673 IGLC3P0DOY3 106 aa5.72□□□□□ -1.49
GPNMB-206ENST00000465673 ZNF22P17026 224 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-206ENST00000465673 NDUFA6P56556 154 aa5.72□□□□□ -1.49
GPNMB-206ENST00000465673 LINC01546A6NGU7 62 aa5.71□□□□□ -1.5
GPNMB-206ENST00000465673 MT1HP80294 61 aa5.71□□□□□ -1.5
GPNMB-206ENST00000465673 Q8N377 158 aa5.71□□□□□ -1.5
GPNMB-206ENST00000465673 LINC00158P58513 81 aa5.7□□□□□ -1.5
GPNMB-206ENST00000465673 COX17Q14061 63 aa5.7□□□□□ -1.5
GPNMB-206ENST00000465673 XP32Q5T750 250 aa5.7□□□□□ -1.5
GPNMB-206ENST00000465673 ZNF706Q9Y5V0 76 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-206ENST00000465673 IGLV9-49A0A0B4J1Y8 123 aa5.69□□□□□ -1.5
GPNMB-206ENST00000465673 MOBPQ13875 183 aa5.69□□□□□ -1.5
GPNMB-206ENST00000465673 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
GPNMB-206ENST00000465673 A0A096LNJ9 63 aa5.68□□□□□ -1.5
GPNMB-206ENST00000465673 C11orf86A6NJI1 115 aa5.68□□□□□ -1.5
GPNMB-206ENST00000465673 KRTAP4-16G5E9R7 235 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-206ENST00000465673 NCR3O14931 201 aa5.68□□□□□ -1.5
GPNMB-206ENST00000465673 ERC2-IT1O76042 136 aa5.68□□□□□ -1.5
GPNMB-206ENST00000465673 LINC00483Q53H64 154 aa5.68□□□□□ -1.5
GPNMB-206ENST00000465673 FA2HQ7L5A8 372 aa5.68□□□□□ -1.5
GPNMB-206ENST00000465673 LINC01549A6NIU2 74 aa5.67□□□□□ -1.5
GPNMB-206ENST00000465673 PRYO14603 147 aa5.67□□□□□ -1.5
GPNMB-206ENST00000465673 SPRR1AP35321 89 aa5.67□□□□□ -1.5
GPNMB-206ENST00000465673 TMEM170BQ5T4T1 132 aa5.67□□□□□ -1.5
GPNMB-206ENST00000465673 SMCO4Q9NRQ5 59 aa5.67□□□□□ -1.5
GPNMB-206ENST00000465673 PMCHL1Q16048 86 aa5.66□□□□□ -1.5
GPNMB-206ENST00000465673 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
GPNMB-206ENST00000465673 URB1-AS1Q96HZ7 61 aa5.66□□□□□ -1.5
GPNMB-206ENST00000465673 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
GPNMB-206ENST00000465673 NDUFA12Q9UI09 145 aa5.66□□□□□ -1.5
GPNMB-206ENST00000465673 TRBV10-3A0A0K0K1G6 114 aa5.65□□□□□ -1.5
GPNMB-206ENST00000465673 ETDCA0A1B0GVM5 59 aa5.65□□□□□ -1.5
GPNMB-206ENST00000465673 SMIM13P0DJ93 91 aa5.65□□□□□ -1.5
GPNMB-206ENST00000465673 PCOTHQ58A44 107 aa5.65□□□□□ -1.5
GPNMB-206ENST00000465673 BAGE3Q86Y29 109 aa5.65□□□□□ -1.5
GPNMB-206ENST00000465673 SLC25A20O43772 301 aa5.64□□□□□ -1.51
GPNMB-206ENST00000465673 LORP23490 312 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-206ENST00000465673 FABP9Q0Z7S8 132 aa5.64□□□□□ -1.51
GPNMB-206ENST00000465673 IGLV8-61A0A075B6I0 122 aa5.63□□□□□ -1.51
GPNMB-206ENST00000465673 B5MCH6 92 aa5.63□□□□□ -1.51
GPNMB-206ENST00000465673 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-206ENST00000465673 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
GPNMB-206ENST00000465673 SSBP3-AS1Q7Z2R9 100 aa5.63□□□□□ -1.51
GPNMB-206ENST00000465673 MIR7-3HGQ8N6C7 128 aa5.63□□□□□ -1.51
GPNMB-206ENST00000465673 SMCPP49901 116 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-206ENST00000465673 FAM19A2Q8N3H0 131 aa5.62□□□□□ -1.51
GPNMB-206ENST00000465673 Q9BRP9 147 aa5.62□□□□□ -1.51
GPNMB-206ENST00000465673 TRAV9-1A0A075B6T8 112 aa5.61□□□□□ -1.51
GPNMB-206ENST00000465673 TMEM223A0PJW6 202 aa5.61□□□□□ -1.51
GPNMB-206ENST00000465673 ATP6V1G1O75348 118 aa5.61□□□□□ -1.51
GPNMB-206ENST00000465673 CFC1BP0CG36 223 aa5.61□□□□□ -1.51
GPNMB-206ENST00000465673 SFTA2Q6UW10 78 aa5.61□□□□□ -1.51
GPNMB-206ENST00000465673 C9orf92A6NGG3 77 aa5.6□□□□□ -1.51
GPNMB-206ENST00000465673 HBDP02042 147 aa5.6□□□□□ -1.51
GPNMB-206ENST00000465673 LINC00614P0C842 121 aa5.6□□□□□ -1.51
GPNMB-206ENST00000465673 MEIG1Q5JSS6 88 aa5.6□□□□□ -1.51
GPNMB-206ENST00000465673 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
GPNMB-206ENST00000465673 C9orf153Q5TBE3 101 aa5.59□□□□□ -1.51
GPNMB-206ENST00000465673 C18orf32Q8TCD1 76 aa5.59□□□□□ -1.51
GPNMB-206ENST00000465673 S100PP25815 95 aa5.58□□□□□ -1.52
GPNMB-206ENST00000465673 ST20-AS1Q8NBB2 130 aa5.58□□□□□ -1.52
GPNMB-206ENST00000465673 TMEM218A2RU14 115 aa5.57□□□□□ -1.52
GPNMB-206ENST00000465673 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
GPNMB-206ENST00000465673 Q6ZRX8 168 aa5.57□□□□□ -1.52
GPNMB-206ENST00000465673 M0R2T5 61 aa5.56□□□□□ -1.52
GPNMB-206ENST00000465673 DDTP30046 118 aa5.56□□□□□ -1.52
GPNMB-206ENST00000465673 SEC11CQ9BY50 192 aa5.56□□□□□ -1.52
GPNMB-206ENST00000465673 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
GPNMB-206ENST00000465673 COX19Q49B96 90 aa5.55□□□□□ -1.52
GPNMB-206ENST00000465673 TSPEAR-AS2P59090 65 aa5.54□□□□□ -1.52
GPNMB-206ENST00000465673 HERV-K104P63124 156 aa5.54□□□□□ -1.52
GPNMB-206ENST00000465673 S100A12P80511 92 aa5.54□□□□□ -1.52
GPNMB-206ENST00000465673 TRAPPC1Q9Y5R8 145 aa5.54□□□□□ -1.52
GPNMB-206ENST00000465673 CLLU1Q5K131 121 aa5.53□□□□□ -1.52
GPNMB-206ENST00000465673 RPS10P5Q9NQ39 176 aa5.53□□□□□ -1.52
GPNMB-206ENST00000465673 FLGP20930 4061 aaPredicted RBP5.53□□□□□ -1.52
GPNMB-206ENST00000465673 TRAV12-1A0A0B4J245 112 aa5.52□□□□□ -1.53
GPNMB-206ENST00000465673 IGLV6-57P01721 117 aa5.52□□□□□ -1.53
GPNMB-206ENST00000465673 IFI27L1Q96BM0 104 aa5.52□□□□□ -1.53
GPNMB-206ENST00000465673 LOC107984156A0A0G2JMH3 177 aa5.51□□□□□ -1.53
GPNMB-206ENST00000465673 TRBV10-2A0A0K0K1G8 114 aa5.51□□□□□ -1.53
GPNMB-206ENST00000465673 MYMXA0A1B0GTQ4 84 aa5.51□□□□□ -1.53
GPNMB-206ENST00000465673 EIF4EBP3O60516 100 aaPredicted RBP5.51□□□□□ -1.53
GPNMB-206ENST00000465673 UQCC3Q6UW78 93 aa5.51□□□□□ -1.53
GPNMB-206ENST00000465673 ARL17AQ8IVW1 177 aa5.51□□□□□ -1.53
GPNMB-206ENST00000465673 MAP1LC3CQ9BXW4 147 aa5.51□□□□□ -1.53
GPNMB-206ENST00000465673 TRAV23DV6A0A075B6W5 121 aa5.5□□□□□ -1.53
GPNMB-206ENST00000465673 LINC00587B1AMM8 73 aa5.5□□□□□ -1.53
GPNMB-206ENST00000465673 S100A7L2Q5SY68 101 aa5.5□□□□□ -1.53
GPNMB-206ENST00000465673 SPANXB1Q9NS25 103 aaPredicted RBP5.5□□□□□ -1.53
GPNMB-206ENST00000465673 H0Y8G0 127 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms