RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 IGLV4-69A0A075B6H9 119 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 IGKV3OR2-268A0A0C4DH90 116 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 M0R3E3 92 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 TFF3Q07654 80 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 C9orf129Q5T035 196 aaKnown RBP1.92□□□□□ -2.1
SNX4-202ENST00000465505 LYPD1Q8N2G4 141 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 ST20-AS1Q8NBB2 130 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 WFDC9Q8NEX5 89 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 ARHGAP5-AS1Q96IT6 56 aa1.92□□□□□ -2.1
SNX4-202ENST00000465505 ZFHX2Q9C0A1 2572 aaPredicted RBP1.91□□□□□ -2.1
SNX4-202ENST00000465505 CNOT1A5YKK6 2376 aaKnown RBP1.91□□□□□ -2.1
SNX4-202ENST00000465505 PATE1Q8WXA2 126 aa1.91□□□□□ -2.1
SNX4-202ENST00000465505 WFDC10AQ9H1F0 79 aa1.91□□□□□ -2.1
SNX4-202ENST00000465505 TIMM8BQ9Y5J9 83 aaPredicted RBP1.91□□□□□ -2.1
SNX4-202ENST00000465505 COL4A2P08572 1712 aa1.91□□□□□ -2.1
SNX4-202ENST00000465505 PLCE1Q9P212 2302 aa1.9□□□□□ -2.1
SNX4-202ENST00000465505 A0A087WTM6 91 aa1.9□□□□□ -2.11
SNX4-202ENST00000465505 LINC00959A0A1B0GUT2 108 aa1.9□□□□□ -2.11
SNX4-202ENST00000465505 ABCA1O95477 2261 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 DOPEY2Q9Y3R5 2298 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 KNL1Q8NG31 2342 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 TRGV4A0A0C4DH28 118 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 ETDCA0A1B0GVM5 59 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 CPSF4LA6NMK7 179 aaKnown RBP1.89□□□□□ -2.11
SNX4-202ENST00000465505 NDUFA4O00483 81 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 COA5Q86WW8 74 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 C4orf3Q8WVX3 66 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 LINC00472Q9H8W2 130 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 PRO2289Q9P1D8 64 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 PSORS1C2Q9UIG4 136 aa1.89□□□□□ -2.11
SNX4-202ENST00000465505 TECTAO75443 2155 aa1.88□□□□□ -2.11
SNX4-202ENST00000465505 IAPPP10997 89 aa1.88□□□□□ -2.11
SNX4-202ENST00000465505 GAFA1Q96PS6 74 aa1.88□□□□□ -2.11
SNX4-202ENST00000465505 SMIM2Q9BVW6 85 aa1.88□□□□□ -2.11
SNX4-202ENST00000465505 ASXL3Q9C0F0 2248 aa1.88□□□□□ -2.11
SNX4-202ENST00000465505 CNTRLQ7Z7A1 2325 aa1.88□□□□□ -2.11
SNX4-202ENST00000465505 ALMS1Q8TCU4 4167 aa1.88□□□□□ -2.11
SNX4-202ENST00000465505 IGLV4-60A0A075B6I1 120 aa1.87□□□□□ -2.11
SNX4-202ENST00000465505 TRGV2A0A075B6R0 118 aa1.87□□□□□ -2.11
SNX4-202ENST00000465505 LOC730098B7Z3J9 87 aa1.87□□□□□ -2.11
SNX4-202ENST00000465505 IGLV3-1P01715 115 aa1.87□□□□□ -2.11
SNX4-202ENST00000465505 NBDYA0A0U1RRE5 68 aa1.86□□□□□ -2.11
SNX4-202ENST00000465505 IGKV2-29A2NJV5 120 aaPredicted RBP1.86□□□□□ -2.11
SNX4-202ENST00000465505 NCR3O14931 201 aa1.86□□□□□ -2.11
SNX4-202ENST00000465505 FXYD4P59646 89 aa1.86□□□□□ -2.11
SNX4-202ENST00000465505 COX17Q14061 63 aa1.86□□□□□ -2.11
SNX4-202ENST00000465505 DEFB116Q30KQ4 102 aa1.86□□□□□ -2.11
SNX4-202ENST00000465505 TRIOBPQ9H2D6 2365 aa1.85□□□□□ -2.11
SNX4-202ENST00000465505 ASCC3Q8N3C0 2202 aaKnown RBP1.85□□□□□ -2.11
SNX4-202ENST00000465505 IGKV2-40A0A087WW87 121 aaPredicted RBP1.85□□□□□ -2.11
SNX4-202ENST00000465505 A0A1W2PNN7 141 aa1.85□□□□□ -2.11
SNX4-202ENST00000465505 NDUFA1O15239 70 aa1.85□□□□□ -2.11
SNX4-202ENST00000465505 IGKV2D-40P01614 121 aaPredicted RBP1.85□□□□□ -2.11
SNX4-202ENST00000465505 DEFB112Q30KQ8 113 aa1.85□□□□□ -2.11
SNX4-202ENST00000465505 LINC00308Q8TCZ7 52 aa1.85□□□□□ -2.11
SNX4-202ENST00000465505 TTTY10Q9BZA0 68 aa1.85□□□□□ -2.11
SNX4-202ENST00000465505 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.84□□□□□ -2.11
SNX4-202ENST00000465505 TRBV6-4A0A1B0GX49 114 aa1.84□□□□□ -2.11
SNX4-202ENST00000465505 RNASE3P12724 160 aaKnown RBP1.84□□□□□ -2.11
SNX4-202ENST00000465505 COX7BP24311 80 aa1.84□□□□□ -2.11
SNX4-202ENST00000465505 HAMPP81172 84 aa1.84□□□□□ -2.11
SNX4-202ENST00000465505 Q6ZTI0 123 aa1.84□□□□□ -2.11
SNX4-202ENST00000465505 FN1P02751 2386 aaKnown RBP1.84□□□□□ -2.12
SNX4-202ENST00000465505 ICE1Q9Y2F5 2266 aa1.83□□□□□ -2.12
SNX4-202ENST00000465505 TRGV1A0A0A0MS02 117 aa1.83□□□□□ -2.12
SNX4-202ENST00000465505 Q96NJ1 140 aa1.83□□□□□ -2.12
SNX4-202ENST00000465505 DEFB131BA0A096LNP1 70 aa1.82□□□□□ -2.12
SNX4-202ENST00000465505 CRIP1P50238 77 aa1.82□□□□□ -2.12
SNX4-202ENST00000465505 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.82□□□□□ -2.124e-6■■■■□ 20.8
SNX4-202ENST00000465505 A0A0G2JQZ4 141 aa1.81□□□□□ -2.12
SNX4-202ENST00000465505 C5orf56Q8N8D9 126 aa1.81□□□□□ -2.12
SNX4-202ENST00000465505 SMIM11BQ8TCY0 68 aa1.8□□□□□ -2.12
SNX4-202ENST00000465505 R4GN34 69 aa1.8□□□□□ -2.12
SNX4-202ENST00000465505 COL6A6A6NMZ7 2263 aa1.79□□□□□ -2.12
SNX4-202ENST00000465505 A0A1B0GU69 56 aa1.79□□□□□ -2.12
SNX4-202ENST00000465505 MRPL33O75394 65 aaKnown RBP1.79□□□□□ -2.12
SNX4-202ENST00000465505 POLR2KP53803 58 aaKnown RBP1.79□□□□□ -2.12
SNX4-202ENST00000465505 LINC00315P59091 139 aa1.79□□□□□ -2.12
SNX4-202ENST00000465505 RPL37AP61513 92 aaKnown RBP1.79□□□□□ -2.12
SNX4-202ENST00000465505 TPRXLQ17RH7 258 aa1.79□□□□□ -2.12
SNX4-202ENST00000465505 SPINT4Q6UDR6 99 aa1.79□□□□□ -2.12
SNX4-202ENST00000465505 CCL26Q9Y258 94 aa1.79□□□□□ -2.12
SNX4-202ENST00000465505 IGKV2-28A0A075B6P5 120 aa1.78□□□□□ -2.12
SNX4-202ENST00000465505 IGKV2D-24A0A075B6R9 120 aa1.78□□□□□ -2.12
SNX4-202ENST00000465505 IGKV2D-28P01615 120 aa1.78□□□□□ -2.12
SNX4-202ENST00000465505 IGLV6-57P01721 117 aa1.78□□□□□ -2.12
SNX4-202ENST00000465505 LINC00158P58513 81 aa1.78□□□□□ -2.12
SNX4-202ENST00000465505 Q6ZQY7 126 aa1.78□□□□□ -2.12
SNX4-202ENST00000465505 SPACA4Q8TDM5 124 aa1.78□□□□□ -2.12
SNX4-202ENST00000465505 CACNA1EQ15878 2313 aa1.78□□□□□ -2.13
SNX4-202ENST00000465505 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SNX4-202ENST00000465505 M0R2N4 97 aa1.77□□□□□ -2.13
SNX4-202ENST00000465505 LY6G6CO95867 125 aa1.77□□□□□ -2.13
SNX4-202ENST00000465505 LY6EQ16553 131 aa1.77□□□□□ -2.13
SNX4-202ENST00000465505 LINC00304Q8N9R0 145 aa1.77□□□□□ -2.13
SNX4-202ENST00000465505 CACNA1BQ00975 2339 aa1.76□□□□□ -2.13
SNX4-202ENST00000465505 H3BSH0 61 aa1.76□□□□□ -2.13
SNX4-202ENST00000465505 HRES1P13985 223 aa1.76□□□□□ -2.13
SNX4-202ENST00000465505 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms