RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 VPREB1P12018 145 aa5.85□□□□□ -1.47
TMEM54-203ENST00000463914 TMEM126AQ9H061 195 aa5.85□□□□□ -1.47
TMEM54-203ENST00000463914 M0R378 163 aa5.84□□□□□ -1.47
TMEM54-203ENST00000463914 PFN2P35080 140 aa5.84□□□□□ -1.47
TMEM54-203ENST00000463914 PMCHL1Q16048 86 aa5.84□□□□□ -1.47
TMEM54-203ENST00000463914 Q8NDZ9 215 aa5.84□□□□□ -1.47
TMEM54-203ENST00000463914 CST9LQ9H4G1 147 aa5.84□□□□□ -1.47
TMEM54-203ENST00000463914 ATP5LO75964 103 aa5.83□□□□□ -1.48
TMEM54-203ENST00000463914 HBDP02042 147 aa5.83□□□□□ -1.48
TMEM54-203ENST00000463914 PMVKQ15126 192 aa5.83□□□□□ -1.48
TMEM54-203ENST00000463914 PLEKHB2Q96CS7 222 aa5.83□□□□□ -1.48
TMEM54-203ENST00000463914 SND1-IT1Q9HBX3 110 aa5.83□□□□□ -1.48
TMEM54-203ENST00000463914 CHCHD1Q96BP2 118 aaKnown RBP5.82□□□□□ -1.48
TMEM54-203ENST00000463914 HIGD2AQ9BW72 106 aa5.82□□□□□ -1.48
TMEM54-203ENST00000463914 CTAG1AP78358 180 aa5.81□□□□□ -1.48
TMEM54-203ENST00000463914 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
TMEM54-203ENST00000463914 BAGE3Q86Y29 109 aa5.81□□□□□ -1.48
TMEM54-203ENST00000463914 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
TMEM54-203ENST00000463914 NDUFA6P56556 154 aa5.8□□□□□ -1.48
TMEM54-203ENST00000463914 FP248Q71RG6 208 aaPredicted RBP5.8□□□□□ -1.48
TMEM54-203ENST00000463914 ERG28Q9UKR5 140 aa5.8□□□□□ -1.48
TMEM54-203ENST00000463914 IGLV5-39A0A0G2JS06 123 aa5.79□□□□□ -1.48
TMEM54-203ENST00000463914 H3BRM9 83 aa5.79□□□□□ -1.48
TMEM54-203ENST00000463914 HSBP1O75506 76 aa5.79□□□□□ -1.48
TMEM54-203ENST00000463914 ASB16-AS1Q495Z4 193 aa5.79□□□□□ -1.48
TMEM54-203ENST00000463914 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
TMEM54-203ENST00000463914 DAND5Q8N907 189 aa5.79□□□□□ -1.48
TMEM54-203ENST00000463914 ZNF625Q96I27 306 aaPredicted RBP5.79□□□□□ -1.48
TMEM54-203ENST00000463914 SPRR4Q96PI1 79 aa5.79□□□□□ -1.48
TMEM54-203ENST00000463914 SERF1AO75920 110 aa5.78□□□□□ -1.48
TMEM54-203ENST00000463914 IGLC3P0DOY3 106 aa5.78□□□□□ -1.48
TMEM54-203ENST00000463914 ZNF22P17026 224 aaPredicted RBP5.78□□□□□ -1.48
TMEM54-203ENST00000463914 LINC01547P58512 204 aaPredicted RBP5.78□□□□□ -1.48
TMEM54-203ENST00000463914 LINC00310P59036 64 aa5.78□□□□□ -1.48
TMEM54-203ENST00000463914 RPL24P83731 157 aaKnown RBP5.78□□□□□ -1.48
TMEM54-203ENST00000463914 FAM19A2Q8N3H0 131 aa5.78□□□□□ -1.48
TMEM54-203ENST00000463914 Q8NBF4 154 aa5.78□□□□□ -1.48
TMEM54-203ENST00000463914 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
TMEM54-203ENST00000463914 LINC00337Q8N6G1 96 aa5.77□□□□□ -1.49
TMEM54-203ENST00000463914 IFI27L1Q96BM0 104 aa5.77□□□□□ -1.49
TMEM54-203ENST00000463914 TRAV12-1A0A0B4J245 112 aa5.75□□□□□ -1.49
TMEM54-203ENST00000463914 C11orf86A6NJI1 115 aa5.75□□□□□ -1.49
TMEM54-203ENST00000463914 C4orf48Q5BLP8 95 aa5.75□□□□□ -1.49
TMEM54-203ENST00000463914 CHTOPQ9Y3Y2 248 aaKnown RBP5.75□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BKO60814 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 LEPROTL1O95214 131 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BJP06899 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BOP23527 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BBP33778 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BDP58876 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BCP62807 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 COX17Q14061 63 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST2H2BEQ16778 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BHQ93079 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BNQ99877 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 HIST1H2BMQ99879 126 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 CRCT1Q9UGL9 99 aa5.74□□□□□ -1.49
TMEM54-203ENST00000463914 ZNF706Q9Y5V0 76 aaPredicted RBP5.74□□□□□ -1.49
TMEM54-203ENST00000463914 A0A0U1RRA0 63 aa5.73□□□□□ -1.49
TMEM54-203ENST00000463914 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
TMEM54-203ENST00000463914 TMEM170BQ5T4T1 132 aa5.73□□□□□ -1.49
TMEM54-203ENST00000463914 HSPB8Q9UJY1 196 aa5.73□□□□□ -1.49
TMEM54-203ENST00000463914 FABP4P15090 132 aa5.72□□□□□ -1.49
TMEM54-203ENST00000463914 LINC00158P58513 81 aa5.72□□□□□ -1.49
TMEM54-203ENST00000463914 FSIP2Q5CZC0 6907 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 LOC105371267A0A1B0GV96 52 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 H0Y8G0 127 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 PRYO14603 147 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 NCR3O14931 201 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 SPRR1AP35321 89 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 MOBPQ13875 183 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 SMCR5Q8TEV8 140 aa5.71□□□□□ -1.5
TMEM54-203ENST00000463914 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
TMEM54-203ENST00000463914 SPINK1P00995 79 aa5.7□□□□□ -1.5
TMEM54-203ENST00000463914 SFTA2Q6UW10 78 aa5.7□□□□□ -1.5
TMEM54-203ENST00000463914 KRTAP4-16G5E9R7 235 aaPredicted RBP5.69□□□□□ -1.5
TMEM54-203ENST00000463914 LINC00483Q53H64 154 aa5.69□□□□□ -1.5
TMEM54-203ENST00000463914 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
TMEM54-203ENST00000463914 GAGE2AQ6NT46 116 aa5.69□□□□□ -1.5
TMEM54-203ENST00000463914 BOD1L2Q8IYS8 172 aa5.69□□□□□ -1.5
TMEM54-203ENST00000463914 Q8N377 158 aa5.69□□□□□ -1.5
TMEM54-203ENST00000463914 MAP1LC3CQ9BXW4 147 aa5.69□□□□□ -1.5
TMEM54-203ENST00000463914 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
TMEM54-203ENST00000463914 ETDCA0A1B0GVM5 59 aa5.68□□□□□ -1.5
TMEM54-203ENST00000463914 ERC2-IT1O76042 136 aa5.68□□□□□ -1.5
TMEM54-203ENST00000463914 SMIM13P0DJ93 91 aa5.68□□□□□ -1.5
TMEM54-203ENST00000463914 COA6Q5JTJ3 125 aaKnown RBP5.68□□□□□ -1.5
TMEM54-203ENST00000463914 KCNQ1DNQ9H478 68 aa5.68□□□□□ -1.5
TMEM54-203ENST00000463914 TRBV10-3A0A0K0K1G6 114 aa5.67□□□□□ -1.5
TMEM54-203ENST00000463914 PLNP26678 52 aa5.67□□□□□ -1.5
TMEM54-203ENST00000463914 KRTAP19-2Q3LHN2 52 aa5.67□□□□□ -1.5
TMEM54-203ENST00000463914 XP32Q5T750 250 aa5.67□□□□□ -1.5
TMEM54-203ENST00000463914 PMCHL2Q9BQD1 86 aa5.67□□□□□ -1.5
TMEM54-203ENST00000463914 NDUFA12Q9UI09 145 aa5.67□□□□□ -1.5
TMEM54-203ENST00000463914 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
TMEM54-203ENST00000463914 SYS1-DBNDD2H3BUS1 97 aa5.66□□□□□ -1.5
TMEM54-203ENST00000463914 DPM2O94777 84 aa5.66□□□□□ -1.5
TMEM54-203ENST00000463914 IGKCP01834 107 aa5.66□□□□□ -1.5
TMEM54-203ENST00000463914 MIR7-3HGQ8N6C7 128 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms