RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 M0R378 163 aa4.77□□□□□ -1.65
EPHA4-210ENST00000463446 WFDC2Q14508 124 aa4.77□□□□□ -1.65
EPHA4-210ENST00000463446 VAMP3Q15836 100 aa4.77□□□□□ -1.65
EPHA4-210ENST00000463446 ADAMTSL4-AS1Q5T5F5 129 aa4.77□□□□□ -1.65
EPHA4-210ENST00000463446 RAB37Q96AX2 223 aa4.77□□□□□ -1.65
EPHA4-210ENST00000463446 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
EPHA4-210ENST00000463446 COX6CP09669 75 aa4.76□□□□□ -1.65
EPHA4-210ENST00000463446 C7orf33Q8WU49 177 aa4.76□□□□□ -1.65
EPHA4-210ENST00000463446 LITAFQ99732 161 aa4.76□□□□□ -1.65
EPHA4-210ENST00000463446 CSMD3Q7Z407 3707 aa4.76□□□□□ -1.65
EPHA4-210ENST00000463446 IGLV5-37A0A075B6J1 123 aa4.75□□□□□ -1.65
EPHA4-210ENST00000463446 IGKV2-24A0A0C4DH68 120 aa4.75□□□□□ -1.65
EPHA4-210ENST00000463446 GHRHP01286 108 aa4.75□□□□□ -1.65
EPHA4-210ENST00000463446 CTAG1AP78358 180 aa4.75□□□□□ -1.65
EPHA4-210ENST00000463446 OR13C6PQ8NH95 151 aa4.75□□□□□ -1.65
EPHA4-210ENST00000463446 XAGE1AQ9HD64 81 aa4.75□□□□□ -1.65
EPHA4-210ENST00000463446 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
EPHA4-210ENST00000463446 A0A096LNI7 61 aa4.74□□□□□ -1.65
EPHA4-210ENST00000463446 A0A0B4J2C4 111 aa4.74□□□□□ -1.65
EPHA4-210ENST00000463446 A4D1N5 150 aa4.74□□□□□ -1.65
EPHA4-210ENST00000463446 C2orf91Q6ZV80 131 aa4.74□□□□□ -1.65
EPHA4-210ENST00000463446 MRPL55Q7Z7F7 128 aaKnown RBP4.74□□□□□ -1.65
EPHA4-210ENST00000463446 SPACA4Q8TDM5 124 aa4.74□□□□□ -1.65
EPHA4-210ENST00000463446 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.73□□□□□ -1.65
EPHA4-210ENST00000463446 KRTAP10-2P60368 255 aa4.73□□□□□ -1.65
EPHA4-210ENST00000463446 C9orf129Q5T035 196 aaKnown RBP4.73□□□□□ -1.65
EPHA4-210ENST00000463446 BVES-AS1Q5T3Y7 98 aa4.73□□□□□ -1.65
EPHA4-210ENST00000463446 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
EPHA4-210ENST00000463446 DAND5Q8N907 189 aa4.73□□□□□ -1.65
EPHA4-210ENST00000463446 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
EPHA4-210ENST00000463446 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
EPHA4-210ENST00000463446 C22orf24Q9Y442 160 aa4.73□□□□□ -1.65
EPHA4-210ENST00000463446 A0A087WYN8 130 aa4.72□□□□□ -1.65
EPHA4-210ENST00000463446 TRBV7-6A0A0J9YX20 115 aa4.72□□□□□ -1.65
EPHA4-210ENST00000463446 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
EPHA4-210ENST00000463446 EPM2AB3EWF7 344 aa4.72□□□□□ -1.65
EPHA4-210ENST00000463446 NPC2P61916 151 aa4.72□□□□□ -1.65
EPHA4-210ENST00000463446 UBE2BP63146 152 aa4.72□□□□□ -1.65
EPHA4-210ENST00000463446 DYNC2H1Q8NCM8 4307 aaKnown RBP4.71□□□□□ -1.66
EPHA4-210ENST00000463446 DNAH7Q8WXX0 4024 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 H0YGX0 51 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 M0QXV9 152 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 CFC1BP0CG36 223 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 CFC1P0CG37 223 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 VPREB1P12018 145 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 COL5A1-AS1Q5SY13 56 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 Q6ZSA8 131 aa4.71□□□□□ -1.66
EPHA4-210ENST00000463446 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
EPHA4-210ENST00000463446 IGLV1-50A0A075B6I6 118 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 A0A1B0GWB2 263 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 PCP4L1A6NKN8 68 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 H3BQ85 93 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 SLC25A20O43772 301 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 CDK2AP2O75956 126 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 IGLV6-57P01721 117 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 INAFM2P0DMQ5 153 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 Q1RN00 199 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 FAM19A5Q7Z5A7 132 aaPredicted RBP4.7□□□□□ -1.66
EPHA4-210ENST00000463446 KCNQ1DNQ9H478 68 aa4.7□□□□□ -1.66
EPHA4-210ENST00000463446 PRYO14603 147 aa4.69□□□□□ -1.66
EPHA4-210ENST00000463446 SCGB1C2P0DMR2 95 aa4.69□□□□□ -1.66
EPHA4-210ENST00000463446 PSMB2P49721 201 aa4.69□□□□□ -1.66
EPHA4-210ENST00000463446 SOSTDC1Q6X4U4 206 aa4.69□□□□□ -1.66
EPHA4-210ENST00000463446 LINC00167Q96N53 147 aa4.69□□□□□ -1.66
EPHA4-210ENST00000463446 TRAV23DV6A0A075B6W5 121 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 H0Y9J4 135 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 FAM229AH3BQW9 127 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 RPL28P46779 137 aaKnown RBP4.68□□□□□ -1.66
EPHA4-210ENST00000463446 KRTAP10-1P60331 282 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 BATFQ16520 125 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 LINC01620Q4KN68 170 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 REG3GQ6UW15 175 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 CIRBP-AS1Q8TBR5 109 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 DIRC1Q969H9 104 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-210ENST00000463446 STARD9Q9P2P6 4700 aa4.68□□□□□ -1.66
EPHA4-210ENST00000463446 TRBV20-1A0A075B6N2 111 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 IGKV2-28A0A075B6P5 120 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 ETDCA0A1B0GVM5 59 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 A0A1B0GX51 115 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 NCR3O14931 201 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 ZNF73O43830 326 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-210ENST00000463446 IGKV2D-28P01615 120 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 PLA2G1BP04054 148 aaKnown RBP4.67□□□□□ -1.66
EPHA4-210ENST00000463446 CHTF8P0CG12 524 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 FXYD2P54710 66 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 LINC00337Q8N6G1 96 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 DHRS4-AS1Q9P1J3 65 aa4.67□□□□□ -1.66
EPHA4-210ENST00000463446 TRBV10-3A0A0K0K1G6 114 aa4.66□□□□□ -1.66
EPHA4-210ENST00000463446 FAM168BA1KXE4 195 aa4.66□□□□□ -1.66
EPHA4-210ENST00000463446 EIF4EBP3O60516 100 aaPredicted RBP4.66□□□□□ -1.66
EPHA4-210ENST00000463446 RPL13AP40429 203 aaKnown RBP4.66□□□□□ -1.66
EPHA4-210ENST00000463446 PRR3P79522 188 aaKnown RBP4.66□□□□□ -1.66
EPHA4-210ENST00000463446 C21orf62-AS1Q17RA5 79 aa4.66□□□□□ -1.66
EPHA4-210ENST00000463446 OCIAD2Q56VL3 154 aa4.66□□□□□ -1.66
EPHA4-210ENST00000463446 SERTAD4-AS1Q5TG53 156 aa4.66□□□□□ -1.66
EPHA4-210ENST00000463446 PLECQ15149 4684 aaKnown RBP4.66□□□□□ -1.66
EPHA4-210ENST00000463446 RYR3Q15413 4870 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms