RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 TENM4Q6N022 2769 aa12.51□□□□□ -0.41
HPS3-204ENST00000462030 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
HPS3-204ENST00000462030 LAMTOR3Q9UHA4 124 aa12.5□□□□□ -0.41
HPS3-204ENST00000462030 ZNF561-AS1K7EIQ3 104 aa12.5□□□□□ -0.41
HPS3-204ENST00000462030 SPAG11BQ08648 103 aa12.5□□□□□ -0.41
HPS3-204ENST00000462030 TRBV10-3A0A0K0K1G6 114 aa12.49□□□□□ -0.41
HPS3-204ENST00000462030 KRTAP10-3P60369 221 aa12.49□□□□□ -0.41
HPS3-204ENST00000462030 LYRM9A8MSI8 78 aa12.48□□□□□ -0.41
HPS3-204ENST00000462030 DEFB135Q30KP9 77 aa12.48□□□□□ -0.41
HPS3-204ENST00000462030 LOC110117498A0A087WWA1 95 aa12.47□□□□□ -0.41
HPS3-204ENST00000462030 CYSRT1A8MQ03 144 aa12.47□□□□□ -0.41
HPS3-204ENST00000462030 IGLV6-57P01721 117 aa12.46□□□□□ -0.41
HPS3-204ENST00000462030 Q6ZQY7 126 aa12.46□□□□□ -0.41
HPS3-204ENST00000462030 C20orf197Q8N268 126 aa12.46□□□□□ -0.41
HPS3-204ENST00000462030 ITPR2Q14571 2701 aa12.46□□□□□ -0.41
HPS3-204ENST00000462030 PDZD2O15018 2839 aa12.44□□□□□ -0.42
HPS3-204ENST00000462030 LINC01547P58512 204 aaPredicted RBP12.44□□□□□ -0.42
HPS3-204ENST00000462030 Q6ZVQ6 151 aa12.44□□□□□ -0.42
HPS3-204ENST00000462030 CELA1Q9UNI1 258 aa12.44□□□□□ -0.42
HPS3-204ENST00000462030 A0A0J9YWU9 116 aa12.43□□□□□ -0.42
HPS3-204ENST00000462030 IGHV4-30-4P0DP06 118 aa12.43□□□□□ -0.42
HPS3-204ENST00000462030 DAD1P61803 113 aa12.43□□□□□ -0.42
HPS3-204ENST00000462030 HAMPP81172 84 aa12.43□□□□□ -0.42
HPS3-204ENST00000462030 C5orf47Q569G3 176 aa12.43□□□□□ -0.42
HPS3-204ENST00000462030 VWFP04275 2813 aa12.41□□□□□ -0.42
HPS3-204ENST00000462030 KLK12Q9UKR0 248 aa12.41□□□□□ -0.42
HPS3-204ENST00000462030 XAGE1AQ9HD64 81 aa12.4□□□□□ -0.42
HPS3-204ENST00000462030 HTN3P15516 51 aa12.39□□□□□ -0.43
HPS3-204ENST00000462030 NDUFC2-KCTD14E9PQ53 114 aa12.39□□□□□ -0.43
HPS3-204ENST00000462030 MUC7Q8TAX7 377 aa12.39□□□□□ -0.43
HPS3-204ENST00000462030 TRAV10A0A0B4J240 114 aa12.38□□□□□ -0.43
HPS3-204ENST00000462030 C6orf48Q9UBA6 75 aa12.38□□□□□ -0.43
HPS3-204ENST00000462030 LELP1Q5T871 98 aa12.37□□□□□ -0.43
HPS3-204ENST00000462030 C9orf66Q5T8R8 295 aa12.37□□□□□ -0.43
HPS3-204ENST00000462030 DIRC1Q969H9 104 aa12.37□□□□□ -0.43
HPS3-204ENST00000462030 TRAV7A0A075B6U4 112 aa12.36□□□□□ -0.43
HPS3-204ENST00000462030 PRR34Q9NV39 138 aa12.36□□□□□ -0.43
HPS3-204ENST00000462030 C4orf26Q17RF5 130 aa12.35□□□□□ -0.43
HPS3-204ENST00000462030 Q5XG85 94 aa12.35□□□□□ -0.43
HPS3-204ENST00000462030 Q8NAQ8 132 aa12.35□□□□□ -0.43
HPS3-204ENST00000462030 GVQW2A0A096LPI5 108 aaPredicted RBP12.34□□□□□ -0.43
HPS3-204ENST00000462030 SCXQ7RTU7 201 aa12.34□□□□□ -0.43
HPS3-204ENST00000462030 FAM236DA0A1B0GTK5 79 aa12.33□□□□□ -0.44
HPS3-204ENST00000462030 H7BZZ5 65 aa12.33□□□□□ -0.44
HPS3-204ENST00000462030 ZNF73O43830 326 aaPredicted RBP12.33□□□□□ -0.44
HPS3-204ENST00000462030 FAM236CP0DP71 79 aa12.33□□□□□ -0.44
HPS3-204ENST00000462030 SMR3AQ99954 134 aa12.33□□□□□ -0.44
HPS3-204ENST00000462030 HIVEP2P31629 2446 aa12.33□□□□□ -0.44
HPS3-204ENST00000462030 PDE6GP18545 87 aa12.33□□□□□ -0.44
HPS3-204ENST00000462030 BCE1O60756 84 aa12.32□□□□□ -0.44
HPS3-204ENST00000462030 TRBV7-4A0A0J9YYF1 115 aa12.32□□□□□ -0.44
HPS3-204ENST00000462030 COX7BP24311 80 aa12.32□□□□□ -0.44
HPS3-204ENST00000462030 CXCL6P80162 114 aa12.32□□□□□ -0.44
HPS3-204ENST00000462030 APOC4P55056 127 aa12.31□□□□□ -0.44
HPS3-204ENST00000462030 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.31□□□□□ -0.44
HPS3-204ENST00000462030 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
HPS3-204ENST00000462030 FASNP49327 2511 aaKnown RBP12.3□□□□□ -0.44
HPS3-204ENST00000462030 HELZ2Q9BYK8 2649 aaKnown RBP12.3□□□□□ -0.44
HPS3-204ENST00000462030 ELOF1P60002 83 aaKnown RBP12.3□□□□□ -0.44
HPS3-204ENST00000462030 UNC79Q9P2D8 2635 aa12.29□□□□□ -0.44
HPS3-204ENST00000462030 H3BQ85 93 aa12.29□□□□□ -0.44
HPS3-204ENST00000462030 HIGD2BQ4VC39 106 aa12.29□□□□□ -0.44
HPS3-204ENST00000462030 HRCT1Q6UXD1 115 aa12.29□□□□□ -0.44
HPS3-204ENST00000462030 RMI2Q96E14 147 aa12.29□□□□□ -0.44
HPS3-204ENST00000462030 SPART-AS1P0CW21 52 aa12.28□□□□□ -0.44
HPS3-204ENST00000462030 KLKP1Q107X0 134 aa12.28□□□□□ -0.44
HPS3-204ENST00000462030 VPREB1P12018 145 aa12.27□□□□□ -0.45
HPS3-204ENST00000462030 MIFP14174 115 aa12.27□□□□□ -0.45
HPS3-204ENST00000462030 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
HPS3-204ENST00000462030 CAMK2N2Q96S95 79 aa12.25□□□□□ -0.45
HPS3-204ENST00000462030 TRBV7-6A0A0J9YX20 115 aa12.23□□□□□ -0.45
HPS3-204ENST00000462030 NOTCH2Q04721 2471 aa12.23□□□□□ -0.45
HPS3-204ENST00000462030 EPM2AB3EWF7 344 aa12.22□□□□□ -0.45
HPS3-204ENST00000462030 F8WEM9 126 aa12.22□□□□□ -0.45
HPS3-204ENST00000462030 WFDC10BQ8IUB3 73 aa12.22□□□□□ -0.45
HPS3-204ENST00000462030 SERP1Q9Y6X1 66 aa12.22□□□□□ -0.45
HPS3-204ENST00000462030 Q6ZRU5 148 aa12.21□□□□□ -0.45
HPS3-204ENST00000462030 HIVEP1P15822 2718 aa12.21□□□□□ -0.45
HPS3-204ENST00000462030 LINC00528Q8N1L1 170 aa12.2□□□□□ -0.46
HPS3-204ENST00000462030 M0R378 163 aa12.2□□□□□ -0.46
HPS3-204ENST00000462030 TENM1Q9UKZ4 2725 aa12.19□□□□□ -0.46
HPS3-204ENST00000462030 KRTAP26-1Q6PEX3 210 aa12.19□□□□□ -0.46
HPS3-204ENST00000462030 Q8N9L7 120 aa12.19□□□□□ -0.46
HPS3-204ENST00000462030 EGFEM1PQ0D2K5 195 aa12.18□□□□□ -0.46
HPS3-204ENST00000462030 C15orf56Q8N910 161 aa12.17□□□□□ -0.46
HPS3-204ENST00000462030 HECTD1Q9ULT8 2610 aa12.17□□□□□ -0.46
HPS3-204ENST00000462030 NREPQ16612 68 aa12.16□□□□□ -0.46
HPS3-204ENST00000462030 TRRAPQ9Y4A5 3859 aa12.14□□□□□ -0.47
HPS3-204ENST00000462030 BPY2O14599 106 aa12.14□□□□□ -0.47
HPS3-204ENST00000462030 WIPF1O43516 503 aa12.14□□□□□ -0.47
HPS3-204ENST00000462030 Q6ZRP5 223 aa12.13□□□□□ -0.47
HPS3-204ENST00000462030 J3QKU1 62 aa12.13□□□□□ -0.47
HPS3-204ENST00000462030 IGKV4-1P06312 121 aa12.12□□□□□ -0.47
HPS3-204ENST00000462030 KPRPQ5T749 579 aaPredicted RBP12.12□□□□□ -0.47
HPS3-204ENST00000462030 C3orf84H3BNL1 204 aa12.11□□□□□ -0.47
HPS3-204ENST00000462030 TMEM254Q8TBM7 123 aa12.1□□□□□ -0.47
HPS3-204ENST00000462030 OTOGQ6ZRI0 2925 aa12.09□□□□□ -0.47
HPS3-204ENST00000462030 NDUFC1O43677 76 aa12.09□□□□□ -0.47
HPS3-204ENST00000462030 ATRQ13535 2644 aa12.09□□□□□ -0.47
HPS3-204ENST00000462030 RETNQ9HD89 108 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms