RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 MRPL35Q9NZE8 188 aaKnown RBP10.87□□□□□ -0.67
MRPL28-207ENST00000461550 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
MRPL28-207ENST00000461550 K7EP34 96 aa10.87□□□□□ -0.67
MRPL28-207ENST00000461550 F8VRH5 84 aa10.86□□□□□ -0.67
MRPL28-207ENST00000461550 MT1HL1P0DM35 61 aa10.86□□□□□ -0.67
MRPL28-207ENST00000461550 UNQ6190/PRO20217Q6UXQ8 127 aa10.86□□□□□ -0.67
MRPL28-207ENST00000461550 LINC01561Q8N1V8 128 aa10.86□□□□□ -0.67
MRPL28-207ENST00000461550 NDUFA1O15239 70 aa10.85□□□□□ -0.67
MRPL28-207ENST00000461550 IGLV5-45A0A087WSX0 123 aa10.84□□□□□ -0.67
MRPL28-207ENST00000461550 C11orf86A6NJI1 115 aa10.84□□□□□ -0.67
MRPL28-207ENST00000461550 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
MRPL28-207ENST00000461550 C9orf116Q5BN46 136 aaPredicted RBP10.84□□□□□ -0.67
MRPL28-207ENST00000461550 TOMM7Q9P0U1 55 aa10.84□□□□□ -0.67
MRPL28-207ENST00000461550 KIAA0087Q14695 138 aa10.83□□□□□ -0.68
MRPL28-207ENST00000461550 C6orf48Q9UBA6 75 aa10.83□□□□□ -0.68
MRPL28-207ENST00000461550 ZNF22P17026 224 aaPredicted RBP10.82□□□□□ -0.68
MRPL28-207ENST00000461550 C2orf82Q6UX34 121 aa10.82□□□□□ -0.68
MRPL28-207ENST00000461550 TP73-AS1Q9UF72 201 aa10.82□□□□□ -0.68
MRPL28-207ENST00000461550 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 DPM2O94777 84 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 SERTAD4-AS1Q5TG53 156 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 F8WDY8 70 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 IGKCP01834 107 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 PRSS2P07478 247 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 PLNP26678 52 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 TMEM170BQ5T4T1 132 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 Q6ZRP5 223 aa10.81□□□□□ -0.68
MRPL28-207ENST00000461550 A0A1W2PPM0 123 aa10.8□□□□□ -0.68
MRPL28-207ENST00000461550 FAM168BA1KXE4 195 aa10.8□□□□□ -0.68
MRPL28-207ENST00000461550 C6orf226Q5I0X4 101 aa10.8□□□□□ -0.68
MRPL28-207ENST00000461550 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
MRPL28-207ENST00000461550 SMIM13P0DJ93 91 aa10.79□□□□□ -0.68
MRPL28-207ENST00000461550 TAL2Q16559 108 aa10.79□□□□□ -0.68
MRPL28-207ENST00000461550 GAGE2EQ4V326 116 aa10.79□□□□□ -0.68
MRPL28-207ENST00000461550 GAGE2DQ9UEU5 116 aa10.79□□□□□ -0.68
MRPL28-207ENST00000461550 FABP2P12104 132 aa10.78□□□□□ -0.68
MRPL28-207ENST00000461550 Q8IZM0 81 aa10.78□□□□□ -0.68
MRPL28-207ENST00000461550 COX7B2Q8TF08 81 aa10.78□□□□□ -0.68
MRPL28-207ENST00000461550 H3BUT2 72 aa10.77□□□□□ -0.69
MRPL28-207ENST00000461550 HMCN2Q8NDA2 5059 aa10.77□□□□□ -0.69
MRPL28-207ENST00000461550 TLX1NBP0CAT3 122 aa10.76□□□□□ -0.69
MRPL28-207ENST00000461550 SCGB1A1P11684 91 aa10.76□□□□□ -0.69
MRPL28-207ENST00000461550 CKS1BP61024 79 aa10.76□□□□□ -0.69
MRPL28-207ENST00000461550 FAM19A5Q7Z5A7 132 aaPredicted RBP10.76□□□□□ -0.69
MRPL28-207ENST00000461550 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
MRPL28-207ENST00000461550 SPCS1Q9Y6A9 102 aa10.76□□□□□ -0.69
MRPL28-207ENST00000461550 SPINK6Q6UWN8 80 aa10.75□□□□□ -0.69
MRPL28-207ENST00000461550 PLA2G2DQ9UNK4 145 aa10.75□□□□□ -0.69
MRPL28-207ENST00000461550 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
MRPL28-207ENST00000461550 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
MRPL28-207ENST00000461550 TRBV30A0A0K0K1B3 111 aa10.74□□□□□ -0.69
MRPL28-207ENST00000461550 TMEM223A0PJW6 202 aa10.74□□□□□ -0.69
MRPL28-207ENST00000461550 LINC01600Q96MT4 127 aa10.74□□□□□ -0.69
MRPL28-207ENST00000461550 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
MRPL28-207ENST00000461550 KRTAP7-1Q8IUC3 87 aa10.73□□□□□ -0.69
MRPL28-207ENST00000461550 NDUFC2-KCTD14E9PQ53 114 aa10.72□□□□□ -0.69
MRPL28-207ENST00000461550 NMUP48645 174 aa10.72□□□□□ -0.69
MRPL28-207ENST00000461550 C1orf137Q5JT78 98 aa10.72□□□□□ -0.69
MRPL28-207ENST00000461550 TMEM238C9JI98 176 aa10.71□□□□□ -0.69
MRPL28-207ENST00000461550 PCP2Q8IVA1 136 aa10.71□□□□□ -0.69
MRPL28-207ENST00000461550 F8W1H4 67 aa10.7□□□□□ -0.7
MRPL28-207ENST00000461550 J3QR89 54 aa10.7□□□□□ -0.7
MRPL28-207ENST00000461550 CXCL5P42830 114 aa10.7□□□□□ -0.7
MRPL28-207ENST00000461550 C9orf129Q5T035 196 aaKnown RBP10.7□□□□□ -0.7
MRPL28-207ENST00000461550 REG3GQ6UW15 175 aa10.7□□□□□ -0.7
MRPL28-207ENST00000461550 TNXBP22105 4242 aa10.7□□□□□ -0.7
MRPL28-207ENST00000461550 HERVK_113P61574 105 aa10.69□□□□□ -0.7
MRPL28-207ENST00000461550 CEND1Q8N111 149 aa10.69□□□□□ -0.7
MRPL28-207ENST00000461550 E9PLD3 99 aa10.68□□□□□ -0.7
MRPL28-207ENST00000461550 M0QXV9 152 aa10.68□□□□□ -0.7
MRPL28-207ENST00000461550 IGKV2D-26A0A0A0MRZ7 120 aa10.66□□□□□ -0.7
MRPL28-207ENST00000461550 A0A1B0GWB2 263 aa10.66□□□□□ -0.7
MRPL28-207ENST00000461550 FXYD2P54710 66 aa10.66□□□□□ -0.7
MRPL28-207ENST00000461550 RAB37Q96AX2 223 aa10.66□□□□□ -0.7
MRPL28-207ENST00000461550 ZNF625Q96I27 306 aaPredicted RBP10.66□□□□□ -0.7
MRPL28-207ENST00000461550 XAGE1AQ9HD64 81 aa10.66□□□□□ -0.7
MRPL28-207ENST00000461550 LEPROTO15243 131 aa10.65□□□□□ -0.7
MRPL28-207ENST00000461550 TSPEAR-AS2P59090 65 aa10.65□□□□□ -0.7
MRPL28-207ENST00000461550 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
MRPL28-207ENST00000461550 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
MRPL28-207ENST00000461550 UBE2BP63146 152 aa10.64□□□□□ -0.71
MRPL28-207ENST00000461550 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
MRPL28-207ENST00000461550 J3QQQ9 107 aa10.62□□□□□ -0.71
MRPL28-207ENST00000461550 SIGMAR1Q99720 223 aa10.62□□□□□ -0.71
MRPL28-207ENST00000461550 PFN2P35080 140 aa10.61□□□□□ -0.71
MRPL28-207ENST00000461550 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
MRPL28-207ENST00000461550 LGALS3P17931 250 aaKnown RBP10.6□□□□□ -0.71
MRPL28-207ENST00000461550 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
MRPL28-207ENST00000461550 NAA38Q9BRA0 125 aaKnown RBP10.6□□□□□ -0.71
MRPL28-207ENST00000461550 SPANXB1Q9NS25 103 aaPredicted RBP10.6□□□□□ -0.71
MRPL28-207ENST00000461550 NHP2Q9NX24 153 aaKnown RBP10.6□□□□□ -0.71
MRPL28-207ENST00000461550 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
MRPL28-207ENST00000461550 ERG28Q9UKR5 140 aa10.6□□□□□ -0.71
MRPL28-207ENST00000461550 DIRC1Q969H9 104 aa10.59□□□□□ -0.71
MRPL28-207ENST00000461550 UBR4Q5T4S7 5183 aa10.58□□□□□ -0.72
MRPL28-207ENST00000461550 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
MRPL28-207ENST00000461550 C22orf24Q9Y442 160 aa10.58□□□□□ -0.72
MRPL28-207ENST00000461550 MYMXA0A1B0GTQ4 84 aa10.57□□□□□ -0.72
MRPL28-207ENST00000461550 SFTA2Q6UW10 78 aa10.57□□□□□ -0.72
MRPL28-207ENST00000461550 TMEM238LA0A1B0GVL6 79 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms