RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 LITAFQ99732 161 aa9.15□□□□□ -0.94
COL5A3-202ENST00000461214 PANO1I0J062 215 aa9.14□□□□□ -0.95
COL5A3-202ENST00000461214 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
COL5A3-202ENST00000461214 SLC25A34Q6PIV7 304 aa9.14□□□□□ -0.95
COL5A3-202ENST00000461214 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
COL5A3-202ENST00000461214 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
COL5A3-202ENST00000461214 MYCBP2O75592 4640 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 A0A0U1RRA0 63 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 Q6ZVH6 145 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 COPS9Q8WXC6 57 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 XAGE1AQ9HD64 81 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 FAM30AQ9NZY2 134 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
COL5A3-202ENST00000461214 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
COL5A3-202ENST00000461214 MIEN1Q9BRT3 115 aa9.12□□□□□ -0.95
COL5A3-202ENST00000461214 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
COL5A3-202ENST00000461214 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
COL5A3-202ENST00000461214 A0A087WYN8 130 aa9.11□□□□□ -0.95
COL5A3-202ENST00000461214 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
COL5A3-202ENST00000461214 DAND5Q8N907 189 aa9.11□□□□□ -0.95
COL5A3-202ENST00000461214 HIGD1BQ9P298 99 aa9.11□□□□□ -0.95
COL5A3-202ENST00000461214 SMR3BP02814 79 aaPredicted RBP9.1□□□□□ -0.95
COL5A3-202ENST00000461214 ADAMTSL4-AS1Q5T5F5 129 aa9.1□□□□□ -0.95
COL5A3-202ENST00000461214 TP73-AS1Q9UF72 201 aa9.1□□□□□ -0.95
COL5A3-202ENST00000461214 IGLV5-37A0A075B6J1 123 aa9.09□□□□□ -0.95
COL5A3-202ENST00000461214 IFITM1P13164 125 aa9.09□□□□□ -0.95
COL5A3-202ENST00000461214 RPL24P83731 157 aaKnown RBP9.09□□□□□ -0.95
COL5A3-202ENST00000461214 CIRBP-AS1Q8TBR5 109 aa9.09□□□□□ -0.95
COL5A3-202ENST00000461214 DPH3Q96FX2 82 aa9.09□□□□□ -0.95
COL5A3-202ENST00000461214 C12orf57Q99622 126 aa9.09□□□□□ -0.95
COL5A3-202ENST00000461214 UQCR10Q9UDW1 63 aa9.09□□□□□ -0.95
COL5A3-202ENST00000461214 XGP55808 180 aa9.08□□□□□ -0.96
COL5A3-202ENST00000461214 FAM19A5Q7Z5A7 132 aaPredicted RBP9.08□□□□□ -0.96
COL5A3-202ENST00000461214 LINC00308Q8TCZ7 52 aa9.08□□□□□ -0.96
COL5A3-202ENST00000461214 FAM168BA1KXE4 195 aa9.07□□□□□ -0.96
COL5A3-202ENST00000461214 M0QXV9 152 aa9.07□□□□□ -0.96
COL5A3-202ENST00000461214 NDUFC2O95298 119 aa9.07□□□□□ -0.96
COL5A3-202ENST00000461214 VPREB1P12018 145 aa9.07□□□□□ -0.96
COL5A3-202ENST00000461214 SRRM2Q9UQ35 2752 aaKnown RBP9.07□□□□□ -0.96
COL5A3-202ENST00000461214 A0A1W2PNN7 141 aa9.06□□□□□ -0.96
COL5A3-202ENST00000461214 SRSF9Q13242 221 aaKnown RBP eCLIP9.06□□□□□ -0.96
COL5A3-202ENST00000461214 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
COL5A3-202ENST00000461214 SOSTDC1Q6X4U4 206 aa9.06□□□□□ -0.96
COL5A3-202ENST00000461214 C2orf91Q6ZV80 131 aa9.06□□□□□ -0.96
COL5A3-202ENST00000461214 NKAPP1Q8N9T2 125 aa9.06□□□□□ -0.96
COL5A3-202ENST00000461214 VPS13BQ7Z7G8 4022 aa9.05□□□□□ -0.96
COL5A3-202ENST00000461214 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
COL5A3-202ENST00000461214 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
COL5A3-202ENST00000461214 NPC2P61916 151 aa9.04□□□□□ -0.96
COL5A3-202ENST00000461214 TAL2Q16559 108 aa9.04□□□□□ -0.96
COL5A3-202ENST00000461214 FAT1Q14517 4588 aa9.04□□□□□ -0.96
COL5A3-202ENST00000461214 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
COL5A3-202ENST00000461214 TSTD3H0UI37 97 aa9.03□□□□□ -0.96
COL5A3-202ENST00000461214 MRPL55Q7Z7F7 128 aaKnown RBP9.03□□□□□ -0.96
COL5A3-202ENST00000461214 HIST1H4GQ99525 98 aa9.03□□□□□ -0.96
COL5A3-202ENST00000461214 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
COL5A3-202ENST00000461214 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
COL5A3-202ENST00000461214 HAMPP81172 84 aa9.02□□□□□ -0.97
COL5A3-202ENST00000461214 LBHQ53QV2 105 aaPredicted RBP9.02□□□□□ -0.97
COL5A3-202ENST00000461214 Q8NDZ9 215 aa9.02□□□□□ -0.97
COL5A3-202ENST00000461214 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
COL5A3-202ENST00000461214 C22orf24Q9Y442 160 aa9.02□□□□□ -0.97
COL5A3-202ENST00000461214 HNRNPA3P51991 378 aaKnown RBP9.01□□□□□ -0.97
COL5A3-202ENST00000461214 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
COL5A3-202ENST00000461214 M0R378 163 aa9□□□□□ -0.97
COL5A3-202ENST00000461214 PRO1933Q9H354 126 aa9□□□□□ -0.97
COL5A3-202ENST00000461214 HMCN2Q8NDA2 5059 aa9□□□□□ -0.97
COL5A3-202ENST00000461214 NCR3O14931 201 aa8.99□□□□□ -0.97
COL5A3-202ENST00000461214 HSD52Q0P140 79 aa8.99□□□□□ -0.97
COL5A3-202ENST00000461214 PHF5AQ7RTV0 110 aaKnown RBP8.99□□□□□ -0.97
COL5A3-202ENST00000461214 UBE2BP63146 152 aa8.98□□□□□ -0.97
COL5A3-202ENST00000461214 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
COL5A3-202ENST00000461214 A6NJY4 79 aa8.97□□□□□ -0.97
COL5A3-202ENST00000461214 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
COL5A3-202ENST00000461214 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
COL5A3-202ENST00000461214 LINC00167Q96N53 147 aa8.97□□□□□ -0.97
COL5A3-202ENST00000461214 IGKV2-28A0A075B6P5 120 aa8.96□□□□□ -0.98
COL5A3-202ENST00000461214 A4D1N5 150 aa8.96□□□□□ -0.98
COL5A3-202ENST00000461214 IGKV2D-28P01615 120 aa8.96□□□□□ -0.98
COL5A3-202ENST00000461214 CEND1Q8N111 149 aa8.96□□□□□ -0.98
COL5A3-202ENST00000461214 CBY1Q9Y3M2 126 aa8.96□□□□□ -0.98
COL5A3-202ENST00000461214 IGLV1-50A0A075B6I6 118 aa8.95□□□□□ -0.98
COL5A3-202ENST00000461214 PRR3P79522 188 aaKnown RBP8.95□□□□□ -0.98
COL5A3-202ENST00000461214 GAGE10A6NGK3 116 aa8.94□□□□□ -0.98
COL5A3-202ENST00000461214 KRTAP29-1A8MX34 341 aaPredicted RBP8.94□□□□□ -0.98
COL5A3-202ENST00000461214 IGLV6-57P01721 117 aa8.94□□□□□ -0.98
COL5A3-202ENST00000461214 DDTP30046 118 aa8.94□□□□□ -0.98
COL5A3-202ENST00000461214 S100A7L2Q5SY68 101 aa8.94□□□□□ -0.98
COL5A3-202ENST00000461214 TRAV13-2A0A0B4J235 113 aa8.93□□□□□ -0.98
COL5A3-202ENST00000461214 TRBV10-3A0A0K0K1G6 114 aa8.93□□□□□ -0.98
COL5A3-202ENST00000461214 PRYO14603 147 aa8.93□□□□□ -0.98
COL5A3-202ENST00000461214 LINC00337Q8N6G1 96 aa8.93□□□□□ -0.98
COL5A3-202ENST00000461214 TMEM126AQ9H061 195 aa8.93□□□□□ -0.98
COL5A3-202ENST00000461214 RPL37AP8A6NKH3 93 aa8.92□□□□□ -0.98
COL5A3-202ENST00000461214 RPL37AP61513 92 aaKnown RBP8.92□□□□□ -0.98
COL5A3-202ENST00000461214 KCNQ1DNQ9H478 68 aa8.92□□□□□ -0.98
COL5A3-202ENST00000461214 A0A0B4J2C4 111 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms