RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 KRTDAPP60985 99 aa12.66□□□□□ -0.38
RPUSD3-210ENST00000460909 E9PLD3 99 aa12.65□□□□□ -0.38
RPUSD3-210ENST00000460909 SMIM13P0DJ93 91 aa12.65□□□□□ -0.38
RPUSD3-210ENST00000460909 UBE2BP63146 152 aa12.65□□□□□ -0.38
RPUSD3-210ENST00000460909 LBHQ53QV2 105 aaPredicted RBP12.65□□□□□ -0.38
RPUSD3-210ENST00000460909 C1orf137Q5JT78 98 aa12.65□□□□□ -0.38
RPUSD3-210ENST00000460909 MRPL55Q7Z7F7 128 aaKnown RBP12.65□□□□□ -0.38
RPUSD3-210ENST00000460909 HIST3H2BBQ8N257 126 aa12.65□□□□□ -0.38
RPUSD3-210ENST00000460909 A0A0U1RRA0 63 aa12.64□□□□□ -0.39
RPUSD3-210ENST00000460909 OXTP01178 125 aa12.63□□□□□ -0.39
RPUSD3-210ENST00000460909 VPREB1P12018 145 aa12.63□□□□□ -0.39
RPUSD3-210ENST00000460909 NMUP48645 174 aa12.63□□□□□ -0.39
RPUSD3-210ENST00000460909 SPINK6Q6UWN8 80 aa12.63□□□□□ -0.39
RPUSD3-210ENST00000460909 Q8NDZ9 215 aa12.63□□□□□ -0.39
RPUSD3-210ENST00000460909 LINC00167Q96N53 147 aa12.63□□□□□ -0.39
RPUSD3-210ENST00000460909 LGALS3P17931 250 aaKnown RBP12.62□□□□□ -0.39
RPUSD3-210ENST00000460909 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
RPUSD3-210ENST00000460909 LINC00587B1AMM8 73 aa12.61□□□□□ -0.39
RPUSD3-210ENST00000460909 IGLV7-43P04211 117 aa12.61□□□□□ -0.39
RPUSD3-210ENST00000460909 HIST1H2BLQ99880 126 aa12.61□□□□□ -0.39
RPUSD3-210ENST00000460909 MIR7-3HGQ8N6C7 128 aa12.6□□□□□ -0.39
RPUSD3-210ENST00000460909 NKAPP1Q8N9T2 125 aa12.59□□□□□ -0.39
RPUSD3-210ENST00000460909 GAGE10A6NGK3 116 aa12.58□□□□□ -0.4
RPUSD3-210ENST00000460909 RPL24P83731 157 aaKnown RBP12.58□□□□□ -0.4
RPUSD3-210ENST00000460909 HERC1Q15751 4861 aa12.57□□□□□ -0.4
RPUSD3-210ENST00000460909 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
RPUSD3-210ENST00000460909 RPL37AP8A6NKH3 93 aa12.57□□□□□ -0.4
RPUSD3-210ENST00000460909 S100A6P06703 90 aa12.57□□□□□ -0.4
RPUSD3-210ENST00000460909 S100A2P29034 98 aa12.57□□□□□ -0.4
RPUSD3-210ENST00000460909 C20orf202A1L168 122 aa12.56□□□□□ -0.4
RPUSD3-210ENST00000460909 A0A0J9YXY3 114 aa12.55□□□□□ -0.4
RPUSD3-210ENST00000460909 J3QL48 77 aa12.55□□□□□ -0.4
RPUSD3-210ENST00000460909 SNRPEP62304 92 aaKnown RBP12.55□□□□□ -0.4
RPUSD3-210ENST00000460909 LOC107984156A0A0G2JMH3 177 aa12.54□□□□□ -0.4
RPUSD3-210ENST00000460909 ARL17AQ8IVW1 177 aa12.54□□□□□ -0.4
RPUSD3-210ENST00000460909 DAND5Q8N907 189 aa12.54□□□□□ -0.4
RPUSD3-210ENST00000460909 IGLV1-50A0A075B6I6 118 aa12.53□□□□□ -0.4
RPUSD3-210ENST00000460909 C5orf52A6NGY3 159 aa12.53□□□□□ -0.4
RPUSD3-210ENST00000460909 ATOH7Q8N100 152 aa12.53□□□□□ -0.4
RPUSD3-210ENST00000460909 MT1HL1P0DM35 61 aa12.52□□□□□ -0.41
RPUSD3-210ENST00000460909 BOD1L2Q8IYS8 172 aa12.52□□□□□ -0.41
RPUSD3-210ENST00000460909 ANKRD39Q53RE8 183 aa12.51□□□□□ -0.41
RPUSD3-210ENST00000460909 TTTY13Q9BZ97 58 aa12.51□□□□□ -0.41
RPUSD3-210ENST00000460909 IGKV2-28A0A075B6P5 120 aa12.5□□□□□ -0.41
RPUSD3-210ENST00000460909 BCE1O60756 84 aa12.5□□□□□ -0.41
RPUSD3-210ENST00000460909 IGKV2D-28P01615 120 aa12.5□□□□□ -0.41
RPUSD3-210ENST00000460909 AKR1D1P51857 326 aa12.5□□□□□ -0.41
RPUSD3-210ENST00000460909 ADAMTSL4-AS1Q5T5F5 129 aa12.5□□□□□ -0.41
RPUSD3-210ENST00000460909 LINC01600Q96MT4 127 aa12.5□□□□□ -0.41
RPUSD3-210ENST00000460909 TNXBP22105 4242 aa12.5□□□□□ -0.41
RPUSD3-210ENST00000460909 REG3GQ6UW15 175 aa12.49□□□□□ -0.41
RPUSD3-210ENST00000460909 DIRC1Q969H9 104 aa12.49□□□□□ -0.41
RPUSD3-210ENST00000460909 LITAFQ99732 161 aa12.49□□□□□ -0.41
RPUSD3-210ENST00000460909 H0Y9J4 135 aa12.48□□□□□ -0.41
RPUSD3-210ENST00000460909 M0R378 163 aa12.48□□□□□ -0.41
RPUSD3-210ENST00000460909 ZNF861PO60384 105 aa12.48□□□□□ -0.41
RPUSD3-210ENST00000460909 ZNF815PA8K554 130 aa12.47□□□□□ -0.41
RPUSD3-210ENST00000460909 EIF4EBP3O60516 100 aaPredicted RBP12.46□□□□□ -0.41
RPUSD3-210ENST00000460909 SOSTDC1Q6X4U4 206 aa12.46□□□□□ -0.41
RPUSD3-210ENST00000460909 TMEM238C9JI98 176 aa12.45□□□□□ -0.42
RPUSD3-210ENST00000460909 TIMM17BO60830 172 aa12.45□□□□□ -0.42
RPUSD3-210ENST00000460909 KRTAP13-1Q8IUC0 172 aa12.45□□□□□ -0.42
RPUSD3-210ENST00000460909 NCR3O14931 201 aa12.44□□□□□ -0.42
RPUSD3-210ENST00000460909 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
RPUSD3-210ENST00000460909 RPL28P46779 137 aaKnown RBP12.42□□□□□ -0.42
RPUSD3-210ENST00000460909 KRTAP10-8P60410 259 aa12.42□□□□□ -0.42
RPUSD3-210ENST00000460909 NDUFC2O95298 119 aa12.41□□□□□ -0.42
RPUSD3-210ENST00000460909 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
RPUSD3-210ENST00000460909 NPC2P61916 151 aa12.41□□□□□ -0.42
RPUSD3-210ENST00000460909 PCP2Q8IVA1 136 aa12.41□□□□□ -0.42
RPUSD3-210ENST00000460909 MIEN1Q9BRT3 115 aa12.41□□□□□ -0.42
RPUSD3-210ENST00000460909 TRBV10-2A0A0K0K1G8 114 aa12.4□□□□□ -0.42
RPUSD3-210ENST00000460909 LINC00308Q8TCZ7 52 aa12.39□□□□□ -0.43
RPUSD3-210ENST00000460909 TRBV10-3A0A0K0K1G6 114 aa12.38□□□□□ -0.43
RPUSD3-210ENST00000460909 KCNQ1DNQ9H478 68 aa12.38□□□□□ -0.43
RPUSD3-210ENST00000460909 SPANXB1Q9NS25 103 aaPredicted RBP12.38□□□□□ -0.43
RPUSD3-210ENST00000460909 UBE2AP49459 152 aa12.37□□□□□ -0.43
RPUSD3-210ENST00000460909 PRYO14603 147 aa12.36□□□□□ -0.43
RPUSD3-210ENST00000460909 PRLHP81277 87 aa12.36□□□□□ -0.43
RPUSD3-210ENST00000460909 SCGB1D4Q6XE38 83 aa12.36□□□□□ -0.43
RPUSD3-210ENST00000460909 FAM19A1Q7Z5A9 133 aa12.36□□□□□ -0.43
RPUSD3-210ENST00000460909 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
RPUSD3-210ENST00000460909 SPRR1AP35321 89 aa12.35□□□□□ -0.43
RPUSD3-210ENST00000460909 KRTAP4-16G5E9R7 235 aaPredicted RBP12.34□□□□□ -0.43
RPUSD3-210ENST00000460909 SPANXDQ9BXN6 97 aa12.34□□□□□ -0.43
RPUSD3-210ENST00000460909 SPANXCQ9NY87 97 aa12.34□□□□□ -0.43
RPUSD3-210ENST00000460909 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
RPUSD3-210ENST00000460909 IGLV6-57P01721 117 aa12.33□□□□□ -0.44
RPUSD3-210ENST00000460909 DDTP30046 118 aa12.33□□□□□ -0.44
RPUSD3-210ENST00000460909 PRR26Q8N8Z3 221 aa12.33□□□□□ -0.44
RPUSD3-210ENST00000460909 LINC00337Q8N6G1 96 aa12.31□□□□□ -0.44
RPUSD3-210ENST00000460909 S100A7L2Q5SY68 101 aa12.28□□□□□ -0.44
RPUSD3-210ENST00000460909 Q6ZVH6 145 aa12.28□□□□□ -0.44
RPUSD3-210ENST00000460909 PPDPFQ9H3Y8 114 aa12.28□□□□□ -0.44
RPUSD3-210ENST00000460909 IFITM1P13164 125 aa12.26□□□□□ -0.45
RPUSD3-210ENST00000460909 S100A12P80511 92 aa12.26□□□□□ -0.45
RPUSD3-210ENST00000460909 JOSD1Q15040 202 aaPredicted RBP12.25□□□□□ -0.45
RPUSD3-210ENST00000460909 HIGD2AQ9BW72 106 aa12.25□□□□□ -0.45
RPUSD3-210ENST00000460909 ETDCA0A1B0GVM5 59 aa12.24□□□□□ -0.45
RPUSD3-210ENST00000460909 B5MCH6 92 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms