RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
SCAMP4-206ENST00000460767 SYS1-DBNDD2H3BUS1 97 aa8.25□□□□□ -1.09
SCAMP4-206ENST00000460767 DPM2O94777 84 aa8.25□□□□□ -1.09
SCAMP4-206ENST00000460767 IGLV7-43P04211 117 aa8.25□□□□□ -1.09
SCAMP4-206ENST00000460767 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
SCAMP4-206ENST00000460767 MRPL55Q7Z7F7 128 aaKnown RBP8.25□□□□□ -1.09
SCAMP4-206ENST00000460767 MAP1LC3CQ9BXW4 147 aa8.25□□□□□ -1.09
SCAMP4-206ENST00000460767 MUC2Q02817 5179 aa8.24□□□□□ -1.09
SCAMP4-206ENST00000460767 VPREB1P12018 145 aa8.24□□□□□ -1.09
SCAMP4-206ENST00000460767 PFN2P35080 140 aa8.24□□□□□ -1.09
SCAMP4-206ENST00000460767 LINC01545Q5VT33 79 aa8.24□□□□□ -1.09
SCAMP4-206ENST00000460767 H0Y8G0 127 aa8.23□□□□□ -1.09
SCAMP4-206ENST00000460767 LEPROTO15243 131 aa8.23□□□□□ -1.09
SCAMP4-206ENST00000460767 IGKCP01834 107 aa8.23□□□□□ -1.09
SCAMP4-206ENST00000460767 LINC00167Q96N53 147 aa8.23□□□□□ -1.09
SCAMP4-206ENST00000460767 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
SCAMP4-206ENST00000460767 HERV-K104P63124 156 aa8.22□□□□□ -1.09
SCAMP4-206ENST00000460767 LBHQ53QV2 105 aaPredicted RBP8.22□□□□□ -1.09
SCAMP4-206ENST00000460767 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
SCAMP4-206ENST00000460767 PET117Q6UWS5 81 aa8.21□□□□□ -1.1
SCAMP4-206ENST00000460767 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.1
SCAMP4-206ENST00000460767 FAT4Q6V0I7 4981 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 LOC107984156A0A0G2JMH3 177 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 J3QQQ9 107 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 KRTAP1-4P0C5Y4 121 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 C3orf79P0CE67 100 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 UBE2BP63146 152 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 ARL17AQ8IVW1 177 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
SCAMP4-206ENST00000460767 E9PLD3 99 aa8.19□□□□□ -1.1
SCAMP4-206ENST00000460767 H0Y9J4 135 aa8.19□□□□□ -1.1
SCAMP4-206ENST00000460767 MYMXA0A1B0GTQ4 84 aa8.18□□□□□ -1.1
SCAMP4-206ENST00000460767 SMIM13P0DJ93 91 aa8.18□□□□□ -1.1
SCAMP4-206ENST00000460767 NMUP48645 174 aa8.18□□□□□ -1.1
SCAMP4-206ENST00000460767 IGLV1-50A0A075B6I6 118 aa8.17□□□□□ -1.1
SCAMP4-206ENST00000460767 ZNF861PO60384 105 aa8.17□□□□□ -1.1
SCAMP4-206ENST00000460767 DIRC1Q969H9 104 aa8.17□□□□□ -1.1
SCAMP4-206ENST00000460767 RPL37AP8A6NKH3 93 aa8.16□□□□□ -1.1
SCAMP4-206ENST00000460767 LINC00587B1AMM8 73 aa8.16□□□□□ -1.1
SCAMP4-206ENST00000460767 BCE1O60756 84 aa8.16□□□□□ -1.1
SCAMP4-206ENST00000460767 LINC00158P58513 81 aa8.16□□□□□ -1.1
SCAMP4-206ENST00000460767 HERVK_113P61574 105 aa8.16□□□□□ -1.1
SCAMP4-206ENST00000460767 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
SCAMP4-206ENST00000460767 MIR7-3HGQ8N6C7 128 aa8.16□□□□□ -1.1
SCAMP4-206ENST00000460767 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
SCAMP4-206ENST00000460767 GAGE10A6NGK3 116 aa8.14□□□□□ -1.11
SCAMP4-206ENST00000460767 HIST3H2BBQ8N257 126 aa8.14□□□□□ -1.11
SCAMP4-206ENST00000460767 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
SCAMP4-206ENST00000460767 LITAFQ99732 161 aa8.14□□□□□ -1.11
SCAMP4-206ENST00000460767 IGKV2D-26A0A0A0MRZ7 120 aa8.13□□□□□ -1.11
SCAMP4-206ENST00000460767 A0A0J9YXY3 114 aa8.13□□□□□ -1.11
SCAMP4-206ENST00000460767 A0A0U1RRA0 63 aa8.13□□□□□ -1.11
SCAMP4-206ENST00000460767 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
SCAMP4-206ENST00000460767 M0R378 163 aa8.12□□□□□ -1.11
SCAMP4-206ENST00000460767 IGKV2-28A0A075B6P5 120 aa8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 IGKV2D-28P01615 120 aa8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 LGALS3P17931 250 aaKnown RBP8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 ADAMTSL4-AS1Q5T5F5 129 aa8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 BOD1L2Q8IYS8 172 aa8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 HIST1H2BLQ99880 126 aa8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 TMEM126AQ9H061 195 aa8.11□□□□□ -1.11
SCAMP4-206ENST00000460767 TMEM238C9JI98 176 aa8.1□□□□□ -1.11
SCAMP4-206ENST00000460767 KRTAP4-16G5E9R7 235 aaPredicted RBP8.1□□□□□ -1.11
SCAMP4-206ENST00000460767 SPRR1AP35321 89 aa8.1□□□□□ -1.11
SCAMP4-206ENST00000460767 KRTDAPP60985 99 aa8.1□□□□□ -1.11
SCAMP4-206ENST00000460767 SOSTDC1Q6X4U4 206 aa8.1□□□□□ -1.11
SCAMP4-206ENST00000460767 DAND5Q8N907 189 aa8.1□□□□□ -1.11
SCAMP4-206ENST00000460767 RPL28P46779 137 aaKnown RBP8.09□□□□□ -1.11
SCAMP4-206ENST00000460767 PRR4Q16378 134 aa8.09□□□□□ -1.11
SCAMP4-206ENST00000460767 TRBV10-2A0A0K0K1G8 114 aa8.08□□□□□ -1.12
SCAMP4-206ENST00000460767 TIMM17BO60830 172 aa8.08□□□□□ -1.12
SCAMP4-206ENST00000460767 NDUFC2O95298 119 aa8.08□□□□□ -1.12
SCAMP4-206ENST00000460767 RPL13AP40429 203 aaKnown RBP8.08□□□□□ -1.12
SCAMP4-206ENST00000460767 KCNQ1DNQ9H478 68 aa8.08□□□□□ -1.12
SCAMP4-206ENST00000460767 ANKRD39Q53RE8 183 aa8.07□□□□□ -1.12
SCAMP4-206ENST00000460767 TTTY13Q9BZ97 58 aa8.07□□□□□ -1.12
SCAMP4-206ENST00000460767 C5orf52A6NGY3 159 aa8.05□□□□□ -1.12
SCAMP4-206ENST00000460767 PRYO14603 147 aa8.05□□□□□ -1.12
SCAMP4-206ENST00000460767 AKR1D1P51857 326 aa8.05□□□□□ -1.12
SCAMP4-206ENST00000460767 TRBV10-3A0A0K0K1G6 114 aa8.04□□□□□ -1.12
SCAMP4-206ENST00000460767 C20orf202A1L168 122 aa8.04□□□□□ -1.12
SCAMP4-206ENST00000460767 IGLV6-57P01721 117 aa8.04□□□□□ -1.12
SCAMP4-206ENST00000460767 PRLHP81277 87 aa8.04□□□□□ -1.12
SCAMP4-206ENST00000460767 LINC00337Q8N6G1 96 aa8.04□□□□□ -1.12
SCAMP4-206ENST00000460767 A0A087X002 238 aa8.03□□□□□ -1.12
SCAMP4-206ENST00000460767 ZNF815PA8K554 130 aa8.03□□□□□ -1.12
SCAMP4-206ENST00000460767 NCR3O14931 201 aa8.03□□□□□ -1.12
SCAMP4-206ENST00000460767 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
SCAMP4-206ENST00000460767 SPANXB1Q9NS25 103 aaPredicted RBP8.03□□□□□ -1.12
SCAMP4-206ENST00000460767 SNRPEP62304 92 aaKnown RBP8.02□□□□□ -1.13
SCAMP4-206ENST00000460767 ATOH7Q8N100 152 aa8.02□□□□□ -1.13
SCAMP4-206ENST00000460767 LINC00308Q8TCZ7 52 aa8.02□□□□□ -1.13
SCAMP4-206ENST00000460767 UBE2AP49459 152 aa8.01□□□□□ -1.13
SCAMP4-206ENST00000460767 FAM19A1Q7Z5A9 133 aa8.01□□□□□ -1.13
SCAMP4-206ENST00000460767 S100A2P29034 98 aa8□□□□□ -1.13
SCAMP4-206ENST00000460767 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
SCAMP4-206ENST00000460767 PCP2Q8IVA1 136 aa8□□□□□ -1.13
SCAMP4-206ENST00000460767 SPANXDQ9BXN6 97 aa8□□□□□ -1.13
SCAMP4-206ENST00000460767 SPANXCQ9NY87 97 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms