RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 NKAPP1Q8N9T2 125 aa13.18□□□□□ -0.3
ABCD4-202ENST00000460308 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
ABCD4-202ENST00000460308 PET117Q6UWS5 81 aa13.17□□□□□ -0.3
ABCD4-202ENST00000460308 LINC00587B1AMM8 73 aa13.16□□□□□ -0.3
ABCD4-202ENST00000460308 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
ABCD4-202ENST00000460308 J3QQQ9 107 aa13.15□□□□□ -0.3
ABCD4-202ENST00000460308 RPL24P83731 157 aaKnown RBP13.15□□□□□ -0.3
ABCD4-202ENST00000460308 IGLV5-37A0A075B6J1 123 aa13.14□□□□□ -0.31
ABCD4-202ENST00000460308 SMIM13P0DJ93 91 aa13.14□□□□□ -0.31
ABCD4-202ENST00000460308 LGALS3P17931 250 aaKnown RBP13.14□□□□□ -0.31
ABCD4-202ENST00000460308 REG3GQ6UW15 175 aa13.14□□□□□ -0.31
ABCD4-202ENST00000460308 GAGE10A6NGK3 116 aa13.13□□□□□ -0.31
ABCD4-202ENST00000460308 C3orf79P0CE67 100 aa13.13□□□□□ -0.31
ABCD4-202ENST00000460308 KRTDAPP60985 99 aa13.13□□□□□ -0.31
ABCD4-202ENST00000460308 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
ABCD4-202ENST00000460308 LRP1Q07954 4544 aaKnown RBP13.12□□□□□ -0.31
ABCD4-202ENST00000460308 TSPEAR-AS2P59090 65 aa13.12□□□□□ -0.31
ABCD4-202ENST00000460308 LINC01545Q5VT33 79 aa13.12□□□□□ -0.31
ABCD4-202ENST00000460308 RPL37AP8A6NKH3 93 aa13.11□□□□□ -0.31
ABCD4-202ENST00000460308 NMUP48645 174 aa13.11□□□□□ -0.31
ABCD4-202ENST00000460308 FAT3Q8TDW7 4589 aa13.1□□□□□ -0.31
ABCD4-202ENST00000460308 E9PLD3 99 aa13.09□□□□□ -0.31
ABCD4-202ENST00000460308 VPREB1P12018 145 aa13.09□□□□□ -0.31
ABCD4-202ENST00000460308 MIR7-3HGQ8N6C7 128 aa13.09□□□□□ -0.31
ABCD4-202ENST00000460308 DIRC1Q969H9 104 aa13.09□□□□□ -0.31
ABCD4-202ENST00000460308 C20orf202A1L168 122 aa13.08□□□□□ -0.32
ABCD4-202ENST00000460308 S100A6P06703 90 aa13.05□□□□□ -0.32
ABCD4-202ENST00000460308 S100A2P29034 98 aa13.05□□□□□ -0.32
ABCD4-202ENST00000460308 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
ABCD4-202ENST00000460308 IGKV2-28A0A075B6P5 120 aa13.04□□□□□ -0.32
ABCD4-202ENST00000460308 IGKV2D-28P01615 120 aa13.04□□□□□ -0.32
ABCD4-202ENST00000460308 BOD1L2Q8IYS8 172 aa13.04□□□□□ -0.32
ABCD4-202ENST00000460308 ZNF861PO60384 105 aa13.03□□□□□ -0.32
ABCD4-202ENST00000460308 BCE1O60756 84 aa13.03□□□□□ -0.32
ABCD4-202ENST00000460308 H0Y9J4 135 aa13.02□□□□□ -0.33
ABCD4-202ENST00000460308 Q8NDZ9 215 aa13.02□□□□□ -0.33
ABCD4-202ENST00000460308 IGLV1-50A0A075B6I6 118 aa13.01□□□□□ -0.33
ABCD4-202ENST00000460308 AKR1D1P51857 326 aa13.01□□□□□ -0.33
ABCD4-202ENST00000460308 DAND5Q8N907 189 aa13.01□□□□□ -0.33
ABCD4-202ENST00000460308 M0R378 163 aa13□□□□□ -0.33
ABCD4-202ENST00000460308 MT1HL1P0DM35 61 aa13□□□□□ -0.33
ABCD4-202ENST00000460308 RPL28P46779 137 aaKnown RBP13□□□□□ -0.33
ABCD4-202ENST00000460308 HIST3H2BBQ8N257 126 aa13□□□□□ -0.33
ABCD4-202ENST00000460308 A0A0J9YXY3 114 aa12.99□□□□□ -0.33
ABCD4-202ENST00000460308 MIEN1Q9BRT3 115 aa12.99□□□□□ -0.33
ABCD4-202ENST00000460308 HERC1Q15751 4861 aa12.99□□□□□ -0.33
ABCD4-202ENST00000460308 UBE2AP49459 152 aa12.98□□□□□ -0.33
ABCD4-202ENST00000460308 HIST1H2BLQ99880 126 aa12.97□□□□□ -0.33
ABCD4-202ENST00000460308 NCR3O14931 201 aa12.96□□□□□ -0.33
ABCD4-202ENST00000460308 IGKV2D-26A0A0A0MRZ7 120 aa12.95□□□□□ -0.34
ABCD4-202ENST00000460308 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
ABCD4-202ENST00000460308 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
ABCD4-202ENST00000460308 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
ABCD4-202ENST00000460308 ATOH7Q8N100 152 aa12.95□□□□□ -0.34
ABCD4-202ENST00000460308 TMEM238C9JI98 176 aa12.94□□□□□ -0.34
ABCD4-202ENST00000460308 TMEM126AQ9H061 195 aa12.94□□□□□ -0.34
ABCD4-202ENST00000460308 SNRPEP62304 92 aaKnown RBP12.93□□□□□ -0.34
ABCD4-202ENST00000460308 FAM19A1Q7Z5A9 133 aa12.93□□□□□ -0.34
ABCD4-202ENST00000460308 KRTAP10-8P60410 259 aa12.92□□□□□ -0.34
ABCD4-202ENST00000460308 ADAMTSL4-AS1Q5T5F5 129 aa12.92□□□□□ -0.34
ABCD4-202ENST00000460308 NPC2P61916 151 aa12.91□□□□□ -0.34
ABCD4-202ENST00000460308 TTTY13Q9BZ97 58 aa12.91□□□□□ -0.34
ABCD4-202ENST00000460308 S100A12P80511 92 aa12.9□□□□□ -0.34
ABCD4-202ENST00000460308 ANKRD39Q53RE8 183 aa12.9□□□□□ -0.34
ABCD4-202ENST00000460308 TIMM17BO60830 172 aa12.89□□□□□ -0.35
ABCD4-202ENST00000460308 TRBV10-2A0A0K0K1G8 114 aa12.88□□□□□ -0.35
ABCD4-202ENST00000460308 PRLHP81277 87 aa12.88□□□□□ -0.35
ABCD4-202ENST00000460308 PRR26Q8N8Z3 221 aa12.88□□□□□ -0.35
ABCD4-202ENST00000460308 PRYO14603 147 aa12.87□□□□□ -0.35
ABCD4-202ENST00000460308 NDUFC2O95298 119 aa12.87□□□□□ -0.35
ABCD4-202ENST00000460308 SCGB1D4Q6XE38 83 aa12.87□□□□□ -0.35
ABCD4-202ENST00000460308 KRTAP13-1Q8IUC0 172 aa12.87□□□□□ -0.35
ABCD4-202ENST00000460308 SPANXB1Q9NS25 103 aaPredicted RBP12.87□□□□□ -0.35
ABCD4-202ENST00000460308 TRBV10-3A0A0K0K1G6 114 aa12.86□□□□□ -0.35
ABCD4-202ENST00000460308 KRTAP1-4P0C5Y4 121 aa12.86□□□□□ -0.35
ABCD4-202ENST00000460308 TNXBP22105 4242 aa12.86□□□□□ -0.35
ABCD4-202ENST00000460308 C5orf52A6NGY3 159 aa12.85□□□□□ -0.35
ABCD4-202ENST00000460308 HSBP1L1C9JCN9 74 aa12.85□□□□□ -0.35
ABCD4-202ENST00000460308 SOSTDC1Q6X4U4 206 aa12.85□□□□□ -0.35
ABCD4-202ENST00000460308 LITAFQ99732 161 aa12.85□□□□□ -0.35
ABCD4-202ENST00000460308 KCNQ1DNQ9H478 68 aa12.85□□□□□ -0.35
ABCD4-202ENST00000460308 DDTP30046 118 aa12.84□□□□□ -0.35
ABCD4-202ENST00000460308 S100A7L2Q5SY68 101 aa12.84□□□□□ -0.35
ABCD4-202ENST00000460308 LINC00308Q8TCZ7 52 aa12.84□□□□□ -0.35
ABCD4-202ENST00000460308 ETDCA0A1B0GVM5 59 aa12.81□□□□□ -0.36
ABCD4-202ENST00000460308 EIF4EBP3O60516 100 aaPredicted RBP12.81□□□□□ -0.36
ABCD4-202ENST00000460308 SCGB1D1O95968 90 aa12.81□□□□□ -0.36
ABCD4-202ENST00000460308 RPL13AP40429 203 aaKnown RBP12.81□□□□□ -0.36
ABCD4-202ENST00000460308 PCP2Q8IVA1 136 aa12.81□□□□□ -0.36
ABCD4-202ENST00000460308 LINC00337Q8N6G1 96 aa12.8□□□□□ -0.36
ABCD4-202ENST00000460308 HIGD2AQ9BW72 106 aa12.8□□□□□ -0.36
ABCD4-202ENST00000460308 SPANXCQ9NY87 97 aa12.8□□□□□ -0.36
ABCD4-202ENST00000460308 SPRR1AP35321 89 aa12.79□□□□□ -0.36
ABCD4-202ENST00000460308 COPS9Q8WXC6 57 aa12.78□□□□□ -0.36
ABCD4-202ENST00000460308 IGLV6-57P01721 117 aa12.77□□□□□ -0.37
ABCD4-202ENST00000460308 SPANXDQ9BXN6 97 aa12.77□□□□□ -0.37
ABCD4-202ENST00000460308 CRYGAP11844 174 aa12.76□□□□□ -0.37
ABCD4-202ENST00000460308 OR13C6PQ8NH95 151 aa12.75□□□□□ -0.37
ABCD4-202ENST00000460308 CBY1Q9Y3M2 126 aa12.75□□□□□ -0.37
ABCD4-202ENST00000460308 Q6ZVH6 145 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms