RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 C9orf118A6NHY6 69 aa6.45□□□□□ -1.38
HLA-DQB1-207ENST00000460185 OXTP01178 125 aa6.45□□□□□ -1.38
HLA-DQB1-207ENST00000460185 COX17Q14061 63 aa6.45□□□□□ -1.38
HLA-DQB1-207ENST00000460185 ODF1Q14990 250 aa6.45□□□□□ -1.38
HLA-DQB1-207ENST00000460185 C9orf129Q5T035 196 aaKnown RBP6.45□□□□□ -1.38
HLA-DQB1-207ENST00000460185 PHF5AQ7RTV0 110 aaKnown RBP6.45□□□□□ -1.38
HLA-DQB1-207ENST00000460185 XAGE1AQ9HD64 81 aa6.45□□□□□ -1.38
HLA-DQB1-207ENST00000460185 TMEM223A0PJW6 202 aa6.44□□□□□ -1.38
HLA-DQB1-207ENST00000460185 HERVK_113P61574 105 aa6.44□□□□□ -1.38
HLA-DQB1-207ENST00000460185 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
HLA-DQB1-207ENST00000460185 ERG28Q9UKR5 140 aa6.44□□□□□ -1.38
HLA-DQB1-207ENST00000460185 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
HLA-DQB1-207ENST00000460185 DPM2O94777 84 aa6.43□□□□□ -1.38
HLA-DQB1-207ENST00000460185 PFN2P35080 140 aa6.43□□□□□ -1.38
HLA-DQB1-207ENST00000460185 HNRNPA3P51991 378 aaKnown RBP6.43□□□□□ -1.38
HLA-DQB1-207ENST00000460185 PSORS1C2Q9UIG4 136 aa6.43□□□□□ -1.38
HLA-DQB1-207ENST00000460185 C1orf137Q5JT78 98 aa6.42□□□□□ -1.38
HLA-DQB1-207ENST00000460185 SPINK6Q6UWN8 80 aa6.42□□□□□ -1.38
HLA-DQB1-207ENST00000460185 NKAPP1Q8N9T2 125 aa6.42□□□□□ -1.38
HLA-DQB1-207ENST00000460185 TP73-AS1Q9UF72 201 aa6.42□□□□□ -1.38
HLA-DQB1-207ENST00000460185 LINC00587B1AMM8 73 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 NUPR1O60356 82 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 ATP6V1G1O75348 118 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 IGKCP01834 107 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 HERV-K104P63124 156 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 REG3GQ6UW15 175 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 PLEKHB2Q96CS7 222 aa6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
HLA-DQB1-207ENST00000460185 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
HLA-DQB1-207ENST00000460185 RPL24P83731 157 aaKnown RBP6.4□□□□□ -1.38
HLA-DQB1-207ENST00000460185 SERTAD4-AS1Q5TG53 156 aa6.4□□□□□ -1.38
HLA-DQB1-207ENST00000460185 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.38
HLA-DQB1-207ENST00000460185 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
HLA-DQB1-207ENST00000460185 LINC00158P58513 81 aa6.39□□□□□ -1.39
HLA-DQB1-207ENST00000460185 COA6Q5JTJ3 125 aaKnown RBP6.39□□□□□ -1.39
HLA-DQB1-207ENST00000460185 NDUFA12Q9UI09 145 aa6.39□□□□□ -1.39
HLA-DQB1-207ENST00000460185 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 SYS1-DBNDD2H3BUS1 97 aa6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 LEPROTO15243 131 aa6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 LGALS3P17931 250 aaKnown RBP6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 NMUP48645 174 aa6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 PMCHL2Q9BQD1 86 aa6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 SND1-IT1Q9HBX3 110 aa6.38□□□□□ -1.39
HLA-DQB1-207ENST00000460185 IGLV5-37A0A075B6J1 123 aa6.37□□□□□ -1.39
HLA-DQB1-207ENST00000460185 C20orf202A1L168 122 aa6.37□□□□□ -1.39
HLA-DQB1-207ENST00000460185 AKR1D1P51857 326 aa6.37□□□□□ -1.39
HLA-DQB1-207ENST00000460185 KRTAP5-3Q6L8H2 238 aa6.37□□□□□ -1.39
HLA-DQB1-207ENST00000460185 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
HLA-DQB1-207ENST00000460185 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
HLA-DQB1-207ENST00000460185 DIRC1Q969H9 104 aa6.37□□□□□ -1.39
HLA-DQB1-207ENST00000460185 J3QQQ9 107 aa6.36□□□□□ -1.39
HLA-DQB1-207ENST00000460185 LRP1Q07954 4544 aaKnown RBP6.36□□□□□ -1.39
HLA-DQB1-207ENST00000460185 A0A0U1RRA0 63 aa6.35□□□□□ -1.39
HLA-DQB1-207ENST00000460185 SMIM13P0DJ93 91 aa6.35□□□□□ -1.39
HLA-DQB1-207ENST00000460185 KRTDAPP60985 99 aa6.35□□□□□ -1.39
HLA-DQB1-207ENST00000460185 LINC01545Q5VT33 79 aa6.35□□□□□ -1.39
HLA-DQB1-207ENST00000460185 GAGE10A6NGK3 116 aa6.34□□□□□ -1.39
HLA-DQB1-207ENST00000460185 E9PLD3 99 aa6.34□□□□□ -1.39
HLA-DQB1-207ENST00000460185 SRSF9Q13242 221 aaKnown RBP eCLIP6.34□□□□□ -1.39
HLA-DQB1-207ENST00000460185 LINC00167Q96N53 147 aa6.34□□□□□ -1.39
HLA-DQB1-207ENST00000460185 MIEN1Q9BRT3 115 aa6.34□□□□□ -1.39
HLA-DQB1-207ENST00000460185 RPL37AP8A6NKH3 93 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 H0Y9J4 135 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 S100A6P06703 90 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 C3orf79P0CE67 100 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 VPREB1P12018 145 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 S100A2P29034 98 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 RPL28P46779 137 aaKnown RBP6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 TSPEAR-AS2P59090 65 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 MIR7-3HGQ8N6C7 128 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 CDIP1Q9H305 208 aa6.33□□□□□ -1.4
HLA-DQB1-207ENST00000460185 HERC1Q15751 4861 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 BCE1O60756 84 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 S100A12P80511 92 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 KRTAP11-1Q8IUC1 163 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 BOD1L2Q8IYS8 172 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 LINC01600Q96MT4 127 aa6.32□□□□□ -1.4
HLA-DQB1-207ENST00000460185 IGKV2D-26A0A0A0MRZ7 120 aa6.31□□□□□ -1.4
HLA-DQB1-207ENST00000460185 ZNF861PO60384 105 aa6.31□□□□□ -1.4
HLA-DQB1-207ENST00000460185 UBE2AP49459 152 aa6.31□□□□□ -1.4
HLA-DQB1-207ENST00000460185 IGLV1-50A0A075B6I6 118 aa6.29□□□□□ -1.4
HLA-DQB1-207ENST00000460185 M0R378 163 aa6.29□□□□□ -1.4
HLA-DQB1-207ENST00000460185 A0A0J9YXY3 114 aa6.28□□□□□ -1.4
HLA-DQB1-207ENST00000460185 ZNF815PA8K554 130 aa6.28□□□□□ -1.4
HLA-DQB1-207ENST00000460185 TMEM126AQ9H061 195 aa6.28□□□□□ -1.4
HLA-DQB1-207ENST00000460185 PRYO14603 147 aa6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 NCR3O14931 201 aa6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 RPL13AP40429 203 aaKnown RBP6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 HIST3H2BBQ8N257 126 aa6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 DAND5Q8N907 189 aa6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 SPANXB1Q9NS25 103 aaPredicted RBP6.27□□□□□ -1.41
HLA-DQB1-207ENST00000460185 LOC107984156A0A0G2JMH3 177 aa6.26□□□□□ -1.41
HLA-DQB1-207ENST00000460185 TRBV10-2A0A0K0K1G8 114 aa6.26□□□□□ -1.41
HLA-DQB1-207ENST00000460185 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms